RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
TRPV1-208ENST00000574085 TPM2P07951 284 aa16.04■□□□□ 0.16
TRPV1-208ENST00000574085 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
TRPV1-208ENST00000574085 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
TRPV1-208ENST00000574085 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
TRPV1-208ENST00000574085 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
TRPV1-208ENST00000574085 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
TRPV1-208ENST00000574085 GAS2L3Q86XJ1 694 aa16.02■□□□□ 0.16
TRPV1-208ENST00000574085 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.16
TRPV1-208ENST00000574085 MADDQ8WXG6 1647 aa16.02■□□□□ 0.15
TRPV1-208ENST00000574085 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
TRPV1-208ENST00000574085 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
TRPV1-208ENST00000574085 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
TRPV1-208ENST00000574085 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
TRPV1-208ENST00000574085 ATP10AO60312 1499 aa15.99■□□□□ 0.15
TRPV1-208ENST00000574085 DDIT3P35638 169 aa15.98■□□□□ 0.15
TRPV1-208ENST00000574085 KIAA1211Q6ZU35 1233 aa15.98■□□□□ 0.15
TRPV1-208ENST00000574085 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
TRPV1-208ENST00000574085 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
TRPV1-208ENST00000574085 MVPQ14764 893 aaKnown RBP15.97■□□□□ 0.15
TRPV1-208ENST00000574085 CDC42BPBQ9Y5S2 1711 aa15.97■□□□□ 0.15
TRPV1-208ENST00000574085 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
TRPV1-208ENST00000574085 GBP4Q96PP9 640 aa15.97■□□□□ 0.15
TRPV1-208ENST00000574085 CHD1O14646 1710 aa15.97■□□□□ 0.15
TRPV1-208ENST00000574085 BBXQ8WY36 941 aaPredicted RBP15.96■□□□□ 0.15
TRPV1-208ENST00000574085 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
TRPV1-208ENST00000574085 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
TRPV1-208ENST00000574085 PREX2Q70Z35 1606 aa15.95■□□□□ 0.14
TRPV1-208ENST00000574085 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
TRPV1-208ENST00000574085 CEP152O94986 1710 aa15.95■□□□□ 0.14
TRPV1-208ENST00000574085 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
TRPV1-208ENST00000574085 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
TRPV1-208ENST00000574085 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
TRPV1-208ENST00000574085 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
TRPV1-208ENST00000574085 SKOR2Q2VWA4 1001 aaPredicted RBP15.94■□□□□ 0.14
TRPV1-208ENST00000574085 FTSJ3Q8IY81 847 aaKnown RBP15.94■□□□□ 0.14
TRPV1-208ENST00000574085 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
TRPV1-208ENST00000574085 MAST1Q9Y2H9 1570 aa15.94■□□□□ 0.14
TRPV1-208ENST00000574085 CCDC173Q0VFZ6 552 aa15.94■□□□□ 0.14
TRPV1-208ENST00000574085 SMC5Q8IY18 1101 aa15.94■□□□□ 0.14
TRPV1-208ENST00000574085 RAB3GAP1Q15042 981 aa15.93■□□□□ 0.14
TRPV1-208ENST00000574085 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
TRPV1-208ENST00000574085 SNX21Q969T3 373 aa15.93■□□□□ 0.14
TRPV1-208ENST00000574085 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
TRPV1-208ENST00000574085 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
TRPV1-208ENST00000574085 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
TRPV1-208ENST00000574085 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
TRPV1-208ENST00000574085 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
TRPV1-208ENST00000574085 TTC37Q6PGP7 1564 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 RBM25P49756 843 aaKnown RBP15.91■□□□□ 0.14
TRPV1-208ENST00000574085 ZSCAN30Q86W11 494 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 PTMSP20962 102 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 GTF2E1P29083 439 aaPredicted RBP15.91■□□□□ 0.14
TRPV1-208ENST00000574085 NASPP49321 788 aaPredicted RBP15.91■□□□□ 0.14
TRPV1-208ENST00000574085 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
TRPV1-208ENST00000574085 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
TRPV1-208ENST00000574085 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
TRPV1-208ENST00000574085 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
TRPV1-208ENST00000574085 OFD1O75665 1012 aa15.9■□□□□ 0.14
TRPV1-208ENST00000574085 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
TRPV1-208ENST00000574085 HDAC1Q13547 482 aaPredicted RBP15.89■□□□□ 0.13
TRPV1-208ENST00000574085 MSNP26038 577 aaKnown RBP15.89■□□□□ 0.13
TRPV1-208ENST00000574085 ANP32BQ92688 251 aaKnown RBP15.89■□□□□ 0.13
TRPV1-208ENST00000574085 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
TRPV1-208ENST00000574085 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
TRPV1-208ENST00000574085 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.88■□□□□ 0.13
TRPV1-208ENST00000574085 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
TRPV1-208ENST00000574085 RIPK4P57078 832 aa15.87■□□□□ 0.13
TRPV1-208ENST00000574085 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
TRPV1-208ENST00000574085 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
TRPV1-208ENST00000574085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRPV1-208ENST00000574085 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
TRPV1-208ENST00000574085 KANK1Q14678 1352 aa15.86■□□□□ 0.13
TRPV1-208ENST00000574085 SSFA2P28290 1259 aa15.85■□□□□ 0.13
TRPV1-208ENST00000574085 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
TRPV1-208ENST00000574085 CCDC27Q2M243 656 aa15.85■□□□□ 0.13
TRPV1-208ENST00000574085 CD2BP2O95400 341 aaKnown RBP15.84■□□□□ 0.13
TRPV1-208ENST00000574085 TRIM27P14373 513 aa15.84■□□□□ 0.13
TRPV1-208ENST00000574085 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
TRPV1-208ENST00000574085 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
TRPV1-208ENST00000574085 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
TRPV1-208ENST00000574085 TSR2Q969E8 191 aaKnown RBP15.83■□□□□ 0.13
TRPV1-208ENST00000574085 R3HCC1Q9Y3T6 440 aaKnown RBP15.83■□□□□ 0.13
TRPV1-208ENST00000574085 DDX49Q9Y6V7 483 aaKnown RBP15.83■□□□□ 0.13
TRPV1-208ENST00000574085 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
TRPV1-208ENST00000574085 KIF2CQ99661 725 aa15.83■□□□□ 0.12
TRPV1-208ENST00000574085 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
TRPV1-208ENST00000574085 TRPM2O94759 1503 aa15.83■□□□□ 0.12
TRPV1-208ENST00000574085 TERF1P54274 439 aa15.82■□□□□ 0.12
TRPV1-208ENST00000574085 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
TRPV1-208ENST00000574085 LNPKQ9C0E8 428 aa15.82■□□□□ 0.12
TRPV1-208ENST00000574085 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
TRPV1-208ENST00000574085 KLHL40Q2TBA0 621 aa15.82■□□□□ 0.12
TRPV1-208ENST00000574085 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
TRPV1-208ENST00000574085 CFAP70Q5T0N1 1121 aa15.81■□□□□ 0.12
TRPV1-208ENST00000574085 IPO4Q8TEX9 1081 aaKnown RBP15.81■□□□□ 0.12
TRPV1-208ENST00000574085 IBTKQ9P2D0 1353 aaPredicted RBP15.81■□□□□ 0.12
TRPV1-208ENST00000574085 NUCB1Q02818 461 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms