RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TECPR2O15040 1411 aa31.22■■■□□ 2.59
CHRNB1-206ENST00000574054 CDC42BPGQ6DT37 1551 aa31.2■■■□□ 2.58
CHRNB1-206ENST00000574054 ABCC11Q96J66 1382 aa31.19■■■□□ 2.58
CHRNB1-206ENST00000574054 AFF2P51816 1311 aa31.19■■■□□ 2.58
CHRNB1-206ENST00000574054 ESCO1Q5FWF5 840 aa31.18■■■□□ 2.58
CHRNB1-206ENST00000574054 SOS2Q07890 1332 aaPredicted RBP31.18■■■□□ 2.58
CHRNB1-206ENST00000574054 C8orf37Q96NL8 207 aa31.17■■■□□ 2.58
CHRNB1-206ENST00000574054 PLEKHH1Q9ULM0 1364 aa31.17■■■□□ 2.58
CHRNB1-206ENST00000574054 LAMC1P11047 1609 aa31.16■■■□□ 2.58
CHRNB1-206ENST00000574054 YTHDC2Q9H6S0 1430 aaKnown RBP31.16■■■□□ 2.58
CHRNB1-206ENST00000574054 NUTM2FA1L443 756 aa31.15■■■□□ 2.58
CHRNB1-206ENST00000574054 KNDC1Q76NI1 1749 aa31.14■■■□□ 2.58
CHRNB1-206ENST00000574054 RXRBP28702 533 aa31.13■■■□□ 2.57
CHRNB1-206ENST00000574054 C14orf93Q9H972 538 aaKnown RBP31.13■■■□□ 2.57
CHRNB1-206ENST00000574054 MYOM2P54296 1465 aa31.13■■■□□ 2.57
CHRNB1-206ENST00000574054 ADAMTS2O95450 1211 aa31.12■■■□□ 2.57
CHRNB1-206ENST00000574054 CFAP70Q5T0N1 1121 aa31.12■■■□□ 2.57
CHRNB1-206ENST00000574054 NPHP3Q7Z494 1330 aa31.11■■■□□ 2.57
CHRNB1-206ENST00000574054 NRXN1Q9ULB1 1477 aa31.11■■■□□ 2.57
CHRNB1-206ENST00000574054 DHX57Q6P158 1386 aaKnown RBP31.08■■■□□ 2.57
CHRNB1-206ENST00000574054 FOXO3O43524 673 aa31.07■■■□□ 2.56
CHRNB1-206ENST00000574054 XPCQ01831 940 aaPredicted RBP31.07■■■□□ 2.56
CHRNB1-206ENST00000574054 NGLY1Q96IV0 654 aa31.07■■■□□ 2.56
CHRNB1-206ENST00000574054 SIRT1Q96EB6 747 aa31.04■■■□□ 2.56
CHRNB1-206ENST00000574054 PXDNQ92626 1479 aa31.03■■■□□ 2.56
CHRNB1-206ENST00000574054 QTRT2Q9H974 415 aaKnown RBP31.03■■■□□ 2.56
CHRNB1-206ENST00000574054 SAFB2Q14151 953 aaKnown RBP eCLIP31.02■■■□□ 2.56
CHRNB1-206ENST00000574054 PRAM1Q96QH2 718 aa31.01■■■□□ 2.55
CHRNB1-206ENST00000574054 KDM2AQ9Y2K7 1162 aa31.01■■■□□ 2.55
CHRNB1-206ENST00000574054 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.55
CHRNB1-206ENST00000574054 CDK12Q9NYV4 1490 aaPredicted RBP30.98■■■□□ 2.55
CHRNB1-206ENST00000574054 HRCP23327 699 aa30.98■■■□□ 2.55
CHRNB1-206ENST00000574054 DCAF11Q8TEB1 546 aa30.97■■■□□ 2.55
CHRNB1-206ENST00000574054 POGKQ9P215 609 aa30.97■■■□□ 2.55
CHRNB1-206ENST00000574054 COL22A1Q8NFW1 1626 aaPredicted RBP30.97■■■□□ 2.55
CHRNB1-206ENST00000574054 RBM6P78332 1123 aaKnown RBP30.96■■■□□ 2.55
CHRNB1-206ENST00000574054 USP21Q9UK80 565 aa30.94■■■□□ 2.54
CHRNB1-206ENST00000574054 KIF1AQ12756 1690 aa30.93■■■□□ 2.54
CHRNB1-206ENST00000574054 UPF1Q92900 1129 aaKnown RBP eCLIP30.92■■■□□ 2.54
CHRNB1-206ENST00000574054 TRAK1Q9UPV9 953 aa30.91■■■□□ 2.54
CHRNB1-206ENST00000574054 DLC1Q96QB1 1528 aa30.91■■■□□ 2.54
CHRNB1-206ENST00000574054 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
CHRNB1-206ENST00000574054 RGS12O14924 1447 aa30.9■■■□□ 2.54
CHRNB1-206ENST00000574054 KRT28Q7Z3Y7 464 aa30.9■■■□□ 2.54
CHRNB1-206ENST00000574054 PHF8Q9UPP1 1060 aa30.9■■■□□ 2.54
CHRNB1-206ENST00000574054 FNBP4Q8N3X1 1017 aaPredicted RBP30.89■■■□□ 2.54
CHRNB1-206ENST00000574054 TRPC5Q9UL62 973 aaPredicted RBP30.88■■■□□ 2.53
CHRNB1-206ENST00000574054 SPATA31A3Q5VYP0 1347 aa30.88■■■□□ 2.53
CHRNB1-206ENST00000574054 RGPD8O14715 1765 aaPredicted RBP30.85■■■□□ 2.53
CHRNB1-206ENST00000574054 STAC3Q96MF2 364 aa30.85■■■□□ 2.53
CHRNB1-206ENST00000574054 HIRIP3Q9BW71 556 aaPredicted RBP30.85■■■□□ 2.53
CHRNB1-206ENST00000574054 MINK1Q8N4C8 1332 aaPredicted RBP30.83■■■□□ 2.53
CHRNB1-206ENST00000574054 PSME1Q06323 249 aa30.83■■■□□ 2.53
CHRNB1-206ENST00000574054 ATRNO75882 1429 aa30.81■■■□□ 2.52
CHRNB1-206ENST00000574054 TNS3Q68CZ2 1445 aa30.81■■■□□ 2.52
CHRNB1-206ENST00000574054 PLEKHG5O94827 1062 aa30.8■■■□□ 2.52
CHRNB1-206ENST00000574054 PMFBP1Q8TBY8 1022 aa30.8■■■□□ 2.52
CHRNB1-206ENST00000574054 ANKARQ7Z5J8 1434 aa30.8■■■□□ 2.52
CHRNB1-206ENST00000574054 ADGRB2O60241 1585 aa30.79■■■□□ 2.52
CHRNB1-206ENST00000574054 HAP1P54257 671 aaPredicted RBP30.79■■■□□ 2.52
CHRNB1-206ENST00000574054 LMOD2Q6P5Q4 547 aa30.79■■■□□ 2.52
CHRNB1-206ENST00000574054 MARF1Q9Y4F3 1742 aaKnown RBP30.78■■■□□ 2.52
CHRNB1-206ENST00000574054 BCL9LQ86UU0 1499 aa30.76■■■□□ 2.52
CHRNB1-206ENST00000574054 USP32Q8NFA0 1604 aa30.76■■■□□ 2.51
CHRNB1-206ENST00000574054 SBNO1A3KN83 1393 aa30.75■■■□□ 2.51
CHRNB1-206ENST00000574054 EIF3AQ14152 1382 aaKnown RBP30.75■■■□□ 2.51
CHRNB1-206ENST00000574054 CABLES1Q8TDN4 633 aa30.73■■■□□ 2.51
CHRNB1-206ENST00000574054 ARHGEF10O15013 1369 aa30.72■■■□□ 2.51
CHRNB1-206ENST00000574054 WASLO00401 505 aaPredicted RBP30.72■■■□□ 2.51
CHRNB1-206ENST00000574054 PRR36Q9H6K5 1346 aa30.71■■■□□ 2.51
CHRNB1-206ENST00000574054 TULP4Q9NRJ4 1543 aa30.7■■■□□ 2.51
CHRNB1-206ENST00000574054 ATAD2Q6PL18 1390 aa30.69■■■□□ 2.5
CHRNB1-206ENST00000574054 UNC5CLQ8IV45 518 aa30.69■■■□□ 2.5
CHRNB1-206ENST00000574054 GJD4Q96KN9 370 aaPredicted RBP30.68■■■□□ 2.5
CHRNB1-206ENST00000574054 GPRASP1Q5JY77 1395 aa30.67■■■□□ 2.5
CHRNB1-206ENST00000574054 SLIT2O94813 1529 aa30.67■■■□□ 2.5
CHRNB1-206ENST00000574054 ARHGEF28Q8N1W1 1705 aaKnown RBP30.66■■■□□ 2.5
CHRNB1-206ENST00000574054 NGDNQ8NEJ9 315 aaKnown RBP30.64■■■□□ 2.5
CHRNB1-206ENST00000574054 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.63■■■□□ 2.49
CHRNB1-206ENST00000574054 RALGAPBQ86X10 1494 aa30.61■■■□□ 2.49
CHRNB1-206ENST00000574054 EP400Q96L91 3159 aa30.61■■■□□ 2.49
CHRNB1-206ENST00000574054 ABCA3Q99758 1704 aa30.6■■■□□ 2.49
CHRNB1-206ENST00000574054 TRPM3Q9HCF6 1732 aaPredicted RBP30.6■■■□□ 2.49
CHRNB1-206ENST00000574054 PAK3O75914 559 aaPredicted RBP30.59■■■□□ 2.49
CHRNB1-206ENST00000574054 NUDT16Q96DE0 195 aaKnown RBP30.59■■■□□ 2.49
CHRNB1-206ENST00000574054 KIAA1210Q9ULL0 1709 aa30.57■■■□□ 2.48
CHRNB1-206ENST00000574054 NBPF1Q3BBV0 1214 aa30.57■■■□□ 2.48
CHRNB1-206ENST00000574054 CDK19Q9BWU1 502 aa30.57■■■□□ 2.48
CHRNB1-206ENST00000574054 CCDC9Q9Y3X0 531 aaKnown RBP30.57■■■□□ 2.48
CHRNB1-206ENST00000574054 ATP7BP35670 1465 aa30.57■■■□□ 2.48
CHRNB1-206ENST00000574054 GLI3P10071 1580 aa30.56■■■□□ 2.48
CHRNB1-206ENST00000574054 PLCH1Q4KWH8 1693 aa30.55■■■□□ 2.48
CHRNB1-206ENST00000574054 FAM83GA6ND36 823 aa30.55■■■□□ 2.48
CHRNB1-206ENST00000574054 VPS72Q15906 364 aa30.54■■■□□ 2.48
CHRNB1-206ENST00000574054 ALS2Q96Q42 1657 aa30.54■■■□□ 2.48
CHRNB1-206ENST00000574054 ITSN1Q15811 1721 aa30.53■■■□□ 2.48
CHRNB1-206ENST00000574054 NWD2Q9ULI1 1742 aa30.52■■■□□ 2.48
CHRNB1-206ENST00000574054 SEPT12Q8IYM1 358 aa30.47■■■□□ 2.47
CHRNB1-206ENST00000574054 L3MBTL2Q969R5 705 aa30.47■■■□□ 2.47
CHRNB1-206ENST00000574054 BTG4Q9NY30 223 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms