RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PPP6R1Q9UPN7 881 aa21.23■□□□□ 0.99
USP43-204ENST00000573955 RTN4Q9NQC3 1192 aaKnown RBP21.23■□□□□ 0.99
USP43-204ENST00000573955 PODXL2Q9NZ53 605 aa21.22■□□□□ 0.99
USP43-204ENST00000573955 ADAMTS8Q9UP79 889 aa21.22■□□□□ 0.99
USP43-204ENST00000573955 CABP2Q9NPB3 220 aa21.22■□□□□ 0.99
USP43-204ENST00000573955 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
USP43-204ENST00000573955 ZFYVE9O95405 1425 aa21.2■□□□□ 0.98
USP43-204ENST00000573955 TNNT2P45379 298 aaPredicted RBP21.2■□□□□ 0.98
USP43-204ENST00000573955 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
USP43-204ENST00000573955 EVC2Q86UK5 1308 aa21.19■□□□□ 0.98
USP43-204ENST00000573955 MINK1Q8N4C8 1332 aaPredicted RBP21.19■□□□□ 0.98
USP43-204ENST00000573955 NSD3Q9BZ95 1437 aa21.19■□□□□ 0.98
USP43-204ENST00000573955 PRAM1Q96QH2 718 aa21.18■□□□□ 0.98
USP43-204ENST00000573955 POGKQ9P215 609 aa21.17■□□□□ 0.98
USP43-204ENST00000573955 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
USP43-204ENST00000573955 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
USP43-204ENST00000573955 A2ML1A8K2U0 1454 aa21.16■□□□□ 0.98
USP43-204ENST00000573955 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
USP43-204ENST00000573955 CDCA7LQ96GN5 454 aa21.16■□□□□ 0.98
USP43-204ENST00000573955 NPC1L1Q9UHC9 1359 aa21.15■□□□□ 0.98
USP43-204ENST00000573955 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
USP43-204ENST00000573955 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.97
USP43-204ENST00000573955 NBR1Q14596 966 aa21.14■□□□□ 0.97
USP43-204ENST00000573955 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.97
USP43-204ENST00000573955 ALKQ9UM73 1620 aa21.13■□□□□ 0.97
USP43-204ENST00000573955 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
USP43-204ENST00000573955 TNRQ92752 1358 aa21.12■□□□□ 0.97
USP43-204ENST00000573955 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
USP43-204ENST00000573955 PTPRMP28827 1452 aa21.11■□□□□ 0.97
USP43-204ENST00000573955 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
USP43-204ENST00000573955 B4GALNT3Q6L9W6 998 aa21.08■□□□□ 0.97
USP43-204ENST00000573955 PPP4R2Q9NY27 417 aa21.08■□□□□ 0.96
USP43-204ENST00000573955 CGNL1Q0VF96 1302 aa21.06■□□□□ 0.96
USP43-204ENST00000573955 ANKRD36BQ8N2N9 1353 aa21.05■□□□□ 0.96
USP43-204ENST00000573955 PLEKHH1Q9ULM0 1364 aa21.04■□□□□ 0.96
USP43-204ENST00000573955 PDE3BQ13370 1112 aa21.04■□□□□ 0.96
USP43-204ENST00000573955 LTKP29376 864 aa21.03■□□□□ 0.96
USP43-204ENST00000573955 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
USP43-204ENST00000573955 A0A1W2PP64 1363 aa21.03■□□□□ 0.96
USP43-204ENST00000573955 RCAN3Q9UKA8 241 aa21.03■□□□□ 0.96
USP43-204ENST00000573955 INSRP06213 1382 aa21.02■□□□□ 0.96
USP43-204ENST00000573955 FER1L4A9Z1Z3 1794 aa21.02■□□□□ 0.96
USP43-204ENST00000573955 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
USP43-204ENST00000573955 RNF123Q5XPI4 1314 aa21.01■□□□□ 0.95
USP43-204ENST00000573955 PUS7Q96PZ0 661 aaKnown RBP21.01■□□□□ 0.95
USP43-204ENST00000573955 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
USP43-204ENST00000573955 METP08581 1390 aa21.01■□□□□ 0.95
USP43-204ENST00000573955 C3P01024 1663 aa21■□□□□ 0.95
USP43-204ENST00000573955 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
USP43-204ENST00000573955 APAF1O14727 1248 aa21■□□□□ 0.95
USP43-204ENST00000573955 ABCF1Q8NE71 845 aaKnown RBP eCLIP21■□□□□ 0.95
USP43-204ENST00000573955 NOP58Q9Y2X3 529 aaKnown RBP21■□□□□ 0.95
USP43-204ENST00000573955 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
USP43-204ENST00000573955 MTHFSP49914 203 aa20.99■□□□□ 0.95
USP43-204ENST00000573955 CABP1Q9NZU7 370 aa20.98■□□□□ 0.95
USP43-204ENST00000573955 ATAD2Q6PL18 1390 aa20.97■□□□□ 0.95
USP43-204ENST00000573955 RRP1P56182 461 aaKnown RBP20.97■□□□□ 0.95
USP43-204ENST00000573955 NRXN3Q9Y4C0 1643 aa20.96■□□□□ 0.95
USP43-204ENST00000573955 SETD1AO15047 1707 aaKnown RBP20.96■□□□□ 0.95
USP43-204ENST00000573955 TERF2IPQ9NYB0 399 aa20.95■□□□□ 0.94
USP43-204ENST00000573955 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
USP43-204ENST00000573955 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
USP43-204ENST00000573955 PLIN1O60240 522 aa20.94■□□□□ 0.94
USP43-204ENST00000573955 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
USP43-204ENST00000573955 HDGFP51858 240 aaKnown RBP20.93■□□□□ 0.94
USP43-204ENST00000573955 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
USP43-204ENST00000573955 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
USP43-204ENST00000573955 NEUROD2Q15784 382 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 NINLQ9Y2I6 1382 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 GOLGA2Q08379 1002 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
USP43-204ENST00000573955 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
USP43-204ENST00000573955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.91■□□□□ 0.94
USP43-204ENST00000573955 GLIPR1L2Q4G1C9 344 aa20.91■□□□□ 0.94
USP43-204ENST00000573955 FYB1O15117 783 aa20.91■□□□□ 0.94
USP43-204ENST00000573955 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
USP43-204ENST00000573955 NCKAP5LQ9HCH0 1330 aa20.9■□□□□ 0.94
USP43-204ENST00000573955 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
USP43-204ENST00000573955 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
USP43-204ENST00000573955 NSD2O96028 1365 aa20.89■□□□□ 0.94
USP43-204ENST00000573955 DLC1Q96QB1 1528 aa20.89■□□□□ 0.94
USP43-204ENST00000573955 DUSP27Q5VZP5 1158 aa20.89■□□□□ 0.93
USP43-204ENST00000573955 EXOC6Q8TAG9 804 aa20.89■□□□□ 0.93
USP43-204ENST00000573955 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.93
USP43-204ENST00000573955 SHPRHQ149N8 1683 aa20.88■□□□□ 0.93
USP43-204ENST00000573955 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
USP43-204ENST00000573955 WASLO00401 505 aaPredicted RBP20.86■□□□□ 0.93
USP43-204ENST00000573955 FBLN1P23142 703 aa20.86■□□□□ 0.93
USP43-204ENST00000573955 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
USP43-204ENST00000573955 U2AF1L5P0DN76 240 aaPredicted RBP20.85■□□□□ 0.93
USP43-204ENST00000573955 U2AF1Q01081 240 aaKnown RBP eCLIP20.85■□□□□ 0.93
USP43-204ENST00000573955 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
USP43-204ENST00000573955 EID1Q9Y6B2 187 aa20.84■□□□□ 0.93
USP43-204ENST00000573955 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.93
USP43-204ENST00000573955 ADAMTS13Q76LX8 1427 aa20.83■□□□□ 0.93
USP43-204ENST00000573955 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.92
USP43-204ENST00000573955 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
USP43-204ENST00000573955 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms