RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 IQGAP3Q86VI3 1631 aa10.98□□□□□ -0.65
RPA1-205ENST00000573924 CCDC125Q86Z20 511 aa10.97□□□□□ -0.65
RPA1-205ENST00000573924 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
RPA1-205ENST00000573924 E9PCH4 1651 aa10.97□□□□□ -0.65
RPA1-205ENST00000573924 SETBP1Q9Y6X0 1596 aa10.96□□□□□ -0.65
RPA1-205ENST00000573924 MST1RQ04912 1400 aa10.96□□□□□ -0.65
RPA1-205ENST00000573924 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
RPA1-205ENST00000573924 CAPN15O75808 1086 aa10.96□□□□□ -0.65
RPA1-205ENST00000573924 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
RPA1-205ENST00000573924 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
RPA1-205ENST00000573924 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
RPA1-205ENST00000573924 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
RPA1-205ENST00000573924 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
RPA1-205ENST00000573924 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
RPA1-205ENST00000573924 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
RPA1-205ENST00000573924 XRN1Q8IZH2 1706 aaKnown RBP10.93□□□□□ -0.66
RPA1-205ENST00000573924 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
RPA1-205ENST00000573924 C1QBPQ07021 282 aaKnown RBP10.93□□□□□ -0.66
RPA1-205ENST00000573924 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
RPA1-205ENST00000573924 USP21Q9UK80 565 aa10.93□□□□□ -0.66
RPA1-205ENST00000573924 RGS12O14924 1447 aa10.92□□□□□ -0.66
RPA1-205ENST00000573924 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
RPA1-205ENST00000573924 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
RPA1-205ENST00000573924 LRPPRCP42704 1394 aaKnown RBP10.91□□□□□ -0.66
RPA1-205ENST00000573924 METP08581 1390 aa10.9□□□□□ -0.66
RPA1-205ENST00000573924 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
RPA1-205ENST00000573924 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
RPA1-205ENST00000573924 SPHKAPQ2M3C7 1700 aa10.9□□□□□ -0.66
RPA1-205ENST00000573924 C1orf167Q5SNV9 1468 aa10.9□□□□□ -0.66
RPA1-205ENST00000573924 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
RPA1-205ENST00000573924 ITGAEP38570 1179 aa10.89□□□□□ -0.67
RPA1-205ENST00000573924 FNBP4Q8N3X1 1017 aaPredicted RBP10.89□□□□□ -0.67
RPA1-205ENST00000573924 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
RPA1-205ENST00000573924 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
RPA1-205ENST00000573924 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
RPA1-205ENST00000573924 NRXN3Q9Y4C0 1643 aa10.87□□□□□ -0.67
RPA1-205ENST00000573924 LAMC1P11047 1609 aa10.87□□□□□ -0.67
RPA1-205ENST00000573924 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
RPA1-205ENST00000573924 NALCNQ8IZF0 1738 aa10.86□□□□□ -0.67
RPA1-205ENST00000573924 KIF1BO60333 1816 aa10.86□□□□□ -0.67
RPA1-205ENST00000573924 ESCO1Q5FWF5 840 aa10.85□□□□□ -0.67
RPA1-205ENST00000573924 DDX17Q92841 729 aaKnown RBP10.85□□□□□ -0.67
RPA1-205ENST00000573924 ATRNO75882 1429 aa10.84□□□□□ -0.67
RPA1-205ENST00000573924 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
RPA1-205ENST00000573924 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
RPA1-205ENST00000573924 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
RPA1-205ENST00000573924 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
RPA1-205ENST00000573924 ORAI2Q96SN7 254 aa10.84□□□□□ -0.67
RPA1-205ENST00000573924 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
RPA1-205ENST00000573924 COL22A1Q8NFW1 1626 aaPredicted RBP10.83□□□□□ -0.68
RPA1-205ENST00000573924 ROBO2Q9HCK4 1378 aa10.82□□□□□ -0.68
RPA1-205ENST00000573924 PSME1Q06323 249 aa10.81□□□□□ -0.68
RPA1-205ENST00000573924 BLMP54132 1417 aaPredicted RBP10.81□□□□□ -0.68
RPA1-205ENST00000573924 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
RPA1-205ENST00000573924 CLTCL1P53675 1640 aa10.8□□□□□ -0.68
RPA1-205ENST00000573924 UNC5CLQ8IV45 518 aa10.8□□□□□ -0.68
RPA1-205ENST00000573924 MYOM2P54296 1465 aa10.8□□□□□ -0.68
RPA1-205ENST00000573924 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
RPA1-205ENST00000573924 FOXO3O43524 673 aa10.79□□□□□ -0.68
RPA1-205ENST00000573924 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
RPA1-205ENST00000573924 BCL9LQ86UU0 1499 aa10.79□□□□□ -0.68
RPA1-205ENST00000573924 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
RPA1-205ENST00000573924 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
RPA1-205ENST00000573924 PXDNQ92626 1479 aa10.77□□□□□ -0.69
RPA1-205ENST00000573924 SPDYE2BA6NHP3 402 aa10.77□□□□□ -0.69
RPA1-205ENST00000573924 SPDYE6P0CI01 402 aa10.77□□□□□ -0.69
RPA1-205ENST00000573924 SPDYE2Q495Y8 402 aa10.77□□□□□ -0.69
RPA1-205ENST00000573924 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
RPA1-205ENST00000573924 MARF1Q9Y4F3 1742 aaKnown RBP10.77□□□□□ -0.69
RPA1-205ENST00000573924 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
RPA1-205ENST00000573924 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
RPA1-205ENST00000573924 NAIPQ13075 1403 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 BAG6P46379 1132 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 SPATA31A3Q5VYP0 1347 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 KIF1AQ12756 1690 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 ARHGEF10O15013 1369 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 TECPR2O15040 1411 aa10.75□□□□□ -0.69
RPA1-205ENST00000573924 RALGAPBQ86X10 1494 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 A0A0G2JS52 829 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 MYT1Q01538 1121 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 XPCQ01831 940 aaPredicted RBP10.74□□□□□ -0.69
RPA1-205ENST00000573924 VPS72Q15906 364 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 KRT28Q7Z3Y7 464 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 STK26Q9P289 416 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 SLIT2O94813 1529 aa10.74□□□□□ -0.69
RPA1-205ENST00000573924 PPLO60437 1756 aa10.73□□□□□ -0.69
RPA1-205ENST00000573924 ABCB7O75027 752 aa10.73□□□□□ -0.69
RPA1-205ENST00000573924 KRT27Q7Z3Y8 459 aa10.73□□□□□ -0.69
RPA1-205ENST00000573924 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
RPA1-205ENST00000573924 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
RPA1-205ENST00000573924 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
RPA1-205ENST00000573924 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
RPA1-205ENST00000573924 NUTM2FA1L443 756 aa10.71□□□□□ -0.69
RPA1-205ENST00000573924 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
RPA1-205ENST00000573924 TNS3Q68CZ2 1445 aa10.71□□□□□ -0.69
RPA1-205ENST00000573924 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
RPA1-205ENST00000573924 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms