RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
NDE1-207ENST00000573203 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
NDE1-207ENST00000573203 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 PRAG1Q86YV5 1406 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 MYOM2P54296 1465 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 STK26Q9P289 416 aa13.26□□□□□ -0.29
NDE1-207ENST00000573203 LAMC1P11047 1609 aa13.25□□□□□ -0.29
NDE1-207ENST00000573203 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
NDE1-207ENST00000573203 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 MST1RQ04912 1400 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 LRPPRCP42704 1394 aaKnown RBP13.24□□□□□ -0.29
NDE1-207ENST00000573203 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 CFAP70Q5T0N1 1121 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 TECPR2O15040 1411 aa13.22□□□□□ -0.29
NDE1-207ENST00000573203 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
NDE1-207ENST00000573203 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
NDE1-207ENST00000573203 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
NDE1-207ENST00000573203 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
NDE1-207ENST00000573203 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
NDE1-207ENST00000573203 JCADQ9P266 1359 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
NDE1-207ENST00000573203 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
NDE1-207ENST00000573203 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
NDE1-207ENST00000573203 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
NDE1-207ENST00000573203 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
NDE1-207ENST00000573203 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
NDE1-207ENST00000573203 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
NDE1-207ENST00000573203 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
NDE1-207ENST00000573203 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
NDE1-207ENST00000573203 SPATA31A6Q5VVP1 1343 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
NDE1-207ENST00000573203 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
NDE1-207ENST00000573203 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 POGKQ9P215 609 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
NDE1-207ENST00000573203 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
NDE1-207ENST00000573203 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 SOCS7O14512 581 aa13.11□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
NDE1-207ENST00000573203 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 LRP6O75581 1613 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
NDE1-207ENST00000573203 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 FOXO3O43524 673 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
NDE1-207ENST00000573203 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
NDE1-207ENST00000573203 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
NDE1-207ENST00000573203 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
NDE1-207ENST00000573203 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
NDE1-207ENST00000573203 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
NDE1-207ENST00000573203 PXDNQ92626 1479 aa13.06□□□□□ -0.32
NDE1-207ENST00000573203 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
NDE1-207ENST00000573203 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
NDE1-207ENST00000573203 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
NDE1-207ENST00000573203 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
NDE1-207ENST00000573203 USP32Q8NFA0 1604 aa13.04□□□□□ -0.32
NDE1-207ENST00000573203 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
NDE1-207ENST00000573203 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
NDE1-207ENST00000573203 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
NDE1-207ENST00000573203 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
NDE1-207ENST00000573203 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 PSME1Q06323 249 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 AFF2P51816 1311 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 ITSN1Q15811 1721 aa13□□□□□ -0.33
NDE1-207ENST00000573203 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
NDE1-207ENST00000573203 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
NDE1-207ENST00000573203 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
NDE1-207ENST00000573203 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms