RNA–Protein interactions for RNA: ENST00000573106.1

SPNS2-206, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-206ENST00000573106 SOS2Q07890 1332 aaPredicted RBP23.07■■□□□ 1.28
SPNS2-206ENST00000573106 TECPR2O15040 1411 aa23.06■■□□□ 1.28
SPNS2-206ENST00000573106 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
SPNS2-206ENST00000573106 NUTM2FA1L443 756 aa23.05■■□□□ 1.28
SPNS2-206ENST00000573106 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
SPNS2-206ENST00000573106 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
SPNS2-206ENST00000573106 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
SPNS2-206ENST00000573106 ADAMTS2O95450 1211 aa23.03■■□□□ 1.28
SPNS2-206ENST00000573106 CDC42BPGQ6DT37 1551 aa23.02■■□□□ 1.28
SPNS2-206ENST00000573106 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
SPNS2-206ENST00000573106 IFT172Q9UG01 1749 aa23.02■■□□□ 1.28
SPNS2-206ENST00000573106 RXRBP28702 533 aa23.01■■□□□ 1.27
SPNS2-206ENST00000573106 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
SPNS2-206ENST00000573106 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
SPNS2-206ENST00000573106 XPCQ01831 940 aaPredicted RBP23■■□□□ 1.27
SPNS2-206ENST00000573106 LAMC1P11047 1609 aa22.99■■□□□ 1.27
SPNS2-206ENST00000573106 NRXN1Q9ULB1 1477 aa22.98■■□□□ 1.27
SPNS2-206ENST00000573106 FOXO3O43524 673 aa22.98■■□□□ 1.27
SPNS2-206ENST00000573106 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
SPNS2-206ENST00000573106 MYOM2P54296 1465 aa22.97■■□□□ 1.27
SPNS2-206ENST00000573106 NGLY1Q96IV0 654 aa22.96■■□□□ 1.27
SPNS2-206ENST00000573106 PXDNQ92626 1479 aa22.94■■□□□ 1.26
SPNS2-206ENST00000573106 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
SPNS2-206ENST00000573106 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
SPNS2-206ENST00000573106 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
SPNS2-206ENST00000573106 SIRT1Q96EB6 747 aa22.92■■□□□ 1.26
SPNS2-206ENST00000573106 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
SPNS2-206ENST00000573106 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
SPNS2-206ENST00000573106 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
SPNS2-206ENST00000573106 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.25
SPNS2-206ENST00000573106 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
SPNS2-206ENST00000573106 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
SPNS2-206ENST00000573106 RGS12O14924 1447 aa22.89■■□□□ 1.25
SPNS2-206ENST00000573106 USP21Q9UK80 565 aa22.88■■□□□ 1.25
SPNS2-206ENST00000573106 FNBP4Q8N3X1 1017 aaPredicted RBP22.86■■□□□ 1.25
SPNS2-206ENST00000573106 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
SPNS2-206ENST00000573106 HRCP23327 699 aa22.85■■□□□ 1.25
SPNS2-206ENST00000573106 POGKQ9P215 609 aa22.85■■□□□ 1.25
SPNS2-206ENST00000573106 COL22A1Q8NFW1 1626 aaPredicted RBP22.85■■□□□ 1.25
SPNS2-206ENST00000573106 KRT28Q7Z3Y7 464 aa22.84■■□□□ 1.25
SPNS2-206ENST00000573106 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
SPNS2-206ENST00000573106 FMN2Q9NZ56 1722 aa22.84■■□□□ 1.25
SPNS2-206ENST00000573106 ADGRB1O14514 1584 aa22.84■■□□□ 1.25
SPNS2-206ENST00000573106 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
SPNS2-206ENST00000573106 SPATA31A3Q5VYP0 1347 aa22.82■■□□□ 1.24
SPNS2-206ENST00000573106 TRPC5Q9UL62 973 aaPredicted RBP22.82■■□□□ 1.24
SPNS2-206ENST00000573106 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
SPNS2-206ENST00000573106 DLC1Q96QB1 1528 aa22.81■■□□□ 1.24
SPNS2-206ENST00000573106 ATRNO75882 1429 aa22.79■■□□□ 1.24
SPNS2-206ENST00000573106 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
SPNS2-206ENST00000573106 PLEKHG5O94827 1062 aa22.78■■□□□ 1.24
SPNS2-206ENST00000573106 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
SPNS2-206ENST00000573106 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
SPNS2-206ENST00000573106 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
SPNS2-206ENST00000573106 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
SPNS2-206ENST00000573106 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
SPNS2-206ENST00000573106 ANKARQ7Z5J8 1434 aa22.74■■□□□ 1.23
SPNS2-206ENST00000573106 PSME1Q06323 249 aa22.74■■□□□ 1.23
SPNS2-206ENST00000573106 PRR36Q9H6K5 1346 aa22.74■■□□□ 1.23
SPNS2-206ENST00000573106 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
SPNS2-206ENST00000573106 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
SPNS2-206ENST00000573106 SBNO1A3KN83 1393 aa22.72■■□□□ 1.23
SPNS2-206ENST00000573106 ADGRB2O60241 1585 aa22.72■■□□□ 1.23
SPNS2-206ENST00000573106 HAP1P54257 671 aaPredicted RBP22.71■■□□□ 1.23
SPNS2-206ENST00000573106 WASLO00401 505 aaPredicted RBP22.7■■□□□ 1.22
SPNS2-206ENST00000573106 GJD4Q96KN9 370 aaPredicted RBP22.7■■□□□ 1.22
SPNS2-206ENST00000573106 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
SPNS2-206ENST00000573106 UNC5CLQ8IV45 518 aa22.69■■□□□ 1.22
SPNS2-206ENST00000573106 SLIT2O94813 1529 aa22.68■■□□□ 1.22
SPNS2-206ENST00000573106 ATAD2Q6PL18 1390 aa22.67■■□□□ 1.22
SPNS2-206ENST00000573106 RGPD8O14715 1765 aaPredicted RBP22.67■■□□□ 1.22
SPNS2-206ENST00000573106 ARHGEF10O15013 1369 aa22.66■■□□□ 1.22
SPNS2-206ENST00000573106 TULP4Q9NRJ4 1543 aa22.66■■□□□ 1.22
SPNS2-206ENST00000573106 EIF3AQ14152 1382 aaKnown RBP22.65■■□□□ 1.22
SPNS2-206ENST00000573106 RALGAPBQ86X10 1494 aa22.64■■□□□ 1.21
SPNS2-206ENST00000573106 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
SPNS2-206ENST00000573106 NBPF1Q3BBV0 1214 aa22.62■■□□□ 1.21
SPNS2-206ENST00000573106 NGDNQ8NEJ9 315 aaKnown RBP22.62■■□□□ 1.21
SPNS2-206ENST00000573106 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
SPNS2-206ENST00000573106 FAM83GA6ND36 823 aa22.61■■□□□ 1.21
SPNS2-206ENST00000573106 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
SPNS2-206ENST00000573106 GLI3P10071 1580 aa22.59■■□□□ 1.21
SPNS2-206ENST00000573106 ATP7BP35670 1465 aa22.59■■□□□ 1.21
SPNS2-206ENST00000573106 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
SPNS2-206ENST00000573106 VPS72Q15906 364 aa22.58■■□□□ 1.21
SPNS2-206ENST00000573106 CDK19Q9BWU1 502 aa22.58■■□□□ 1.21
SPNS2-206ENST00000573106 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
SPNS2-206ENST00000573106 ARHGEF28Q8N1W1 1705 aaKnown RBP22.57■■□□□ 1.2
SPNS2-206ENST00000573106 TRPM3Q9HCF6 1732 aaPredicted RBP22.56■■□□□ 1.2
SPNS2-206ENST00000573106 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.55■■□□□ 1.2
SPNS2-206ENST00000573106 EP400Q96L91 3159 aa22.54■■□□□ 1.2
SPNS2-206ENST00000573106 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
SPNS2-206ENST00000573106 ABCA3Q99758 1704 aa22.54■■□□□ 1.2
SPNS2-206ENST00000573106 BTG4Q9NY30 223 aa22.52■■□□□ 1.2
SPNS2-206ENST00000573106 L3MBTL2Q969R5 705 aa22.51■■□□□ 1.19
SPNS2-206ENST00000573106 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
SPNS2-206ENST00000573106 ALS2Q96Q42 1657 aa22.51■■□□□ 1.19
SPNS2-206ENST00000573106 PLCH1Q4KWH8 1693 aa22.5■■□□□ 1.19
SPNS2-206ENST00000573106 NUTM2GQ5VZR2 741 aa22.5■■□□□ 1.19
SPNS2-206ENST00000573106 CCDC61Q9Y6R9 512 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms