RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
TOM1L1-215ENST00000572905 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
TOM1L1-215ENST00000572905 FOXC1Q12948 553 aa10.78□□□□□ -0.68
TOM1L1-215ENST00000572905 GDF9O60383 454 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 SSTR3P32745 418 aaPredicted RBP10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 PRR20EP86478 221 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 PRR20CP86479 221 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 PRR20DP86480 221 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 PRR20BP86481 221 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 PRR20AP86496 221 aa10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.69
TOM1L1-215ENST00000572905 RPIAP49247 311 aa10.75□□□□□ -0.69
TOM1L1-215ENST00000572905 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
TOM1L1-215ENST00000572905 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
TOM1L1-215ENST00000572905 ZBTB24O43167 697 aaPredicted RBP10.74□□□□□ -0.69
TOM1L1-215ENST00000572905 AMHR2Q16671 573 aa10.74□□□□□ -0.69
TOM1L1-215ENST00000572905 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
TOM1L1-215ENST00000572905 FAM187AA6NFU0 413 aa10.73□□□□□ -0.69
TOM1L1-215ENST00000572905 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
TOM1L1-215ENST00000572905 MMP16P51512 607 aa10.73□□□□□ -0.69
TOM1L1-215ENST00000572905 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
TOM1L1-215ENST00000572905 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
TOM1L1-215ENST00000572905 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
TOM1L1-215ENST00000572905 FDX1P10109 184 aa10.7□□□□□ -0.7
TOM1L1-215ENST00000572905 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
TOM1L1-215ENST00000572905 DGAT1O75907 488 aa10.69□□□□□ -0.7
TOM1L1-215ENST00000572905 NDUFV2P19404 249 aa10.69□□□□□ -0.7
TOM1L1-215ENST00000572905 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
TOM1L1-215ENST00000572905 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
TOM1L1-215ENST00000572905 TRIM66O15016 1216 aa10.68□□□□□ -0.7
TOM1L1-215ENST00000572905 MYT1Q01538 1121 aa10.68□□□□□ -0.7
TOM1L1-215ENST00000572905 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
TOM1L1-215ENST00000572905 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
TOM1L1-215ENST00000572905 TRIM32Q13049 653 aa10.67□□□□□ -0.7
TOM1L1-215ENST00000572905 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
TOM1L1-215ENST00000572905 BEGAINQ9BUH8 593 aa10.67□□□□□ -0.7
TOM1L1-215ENST00000572905 JUNDP17535 347 aa10.66□□□□□ -0.7
TOM1L1-215ENST00000572905 RETREG3Q86VR2 466 aa10.66□□□□□ -0.7
TOM1L1-215ENST00000572905 AK7Q96M32 723 aa10.66□□□□□ -0.7
TOM1L1-215ENST00000572905 MS4A1P11836 297 aa10.64□□□□□ -0.71
TOM1L1-215ENST00000572905 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
TOM1L1-215ENST00000572905 CYP4X1Q8N118 509 aa10.64□□□□□ -0.71
TOM1L1-215ENST00000572905 ST8SIA5O15466 376 aa10.62□□□□□ -0.71
TOM1L1-215ENST00000572905 SLC24A3Q9HC58 644 aa10.62□□□□□ -0.71
TOM1L1-215ENST00000572905 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
TOM1L1-215ENST00000572905 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
TOM1L1-215ENST00000572905 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
TOM1L1-215ENST00000572905 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
TOM1L1-215ENST00000572905 TBC1D2Q9BYX2 928 aa10.61□□□□□ -0.71
TOM1L1-215ENST00000572905 WNT7AO00755 349 aa10.6□□□□□ -0.71
TOM1L1-215ENST00000572905 PDE4DQ08499 809 aa10.59□□□□□ -0.71
TOM1L1-215ENST00000572905 MRGPRX2Q96LB1 330 aa10.59□□□□□ -0.71
TOM1L1-215ENST00000572905 MTMR2Q13614 643 aa10.58□□□□□ -0.72
TOM1L1-215ENST00000572905 PRR7Q8TB68 274 aa10.58□□□□□ -0.72
TOM1L1-215ENST00000572905 SKOR1P84550 965 aa10.57□□□□□ -0.72
TOM1L1-215ENST00000572905 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
TOM1L1-215ENST00000572905 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
TOM1L1-215ENST00000572905 AAASQ9NRG9 546 aa10.57□□□□□ -0.72
TOM1L1-215ENST00000572905 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
TOM1L1-215ENST00000572905 GTF3C3Q9Y5Q9 886 aa10.56□□□□□ -0.72
TOM1L1-215ENST00000572905 POTECB2RU33 542 aa10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
TOM1L1-215ENST00000572905 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
TOM1L1-215ENST00000572905 J3QL48 77 aa10.53□□□□□ -0.72
TOM1L1-215ENST00000572905 WNT7BP56706 349 aa10.53□□□□□ -0.72
TOM1L1-215ENST00000572905 PTPRNQ16849 979 aa10.53□□□□□ -0.72
TOM1L1-215ENST00000572905 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
TOM1L1-215ENST00000572905 AVPP01185 164 aa10.52□□□□□ -0.73
TOM1L1-215ENST00000572905 SMPD1P17405 629 aa10.52□□□□□ -0.73
TOM1L1-215ENST00000572905 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
TOM1L1-215ENST00000572905 AXIN1O15169 862 aa10.51□□□□□ -0.73
TOM1L1-215ENST00000572905 GJA5P36382 358 aa10.51□□□□□ -0.73
TOM1L1-215ENST00000572905 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
TOM1L1-215ENST00000572905 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
TOM1L1-215ENST00000572905 SPTLC1O15269 473 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 HRCP23327 699 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 CRIPAKQ8N1N5 446 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 UNC93B1Q9H1C4 597 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
TOM1L1-215ENST00000572905 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
TOM1L1-215ENST00000572905 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
TOM1L1-215ENST00000572905 EHBP1Q8NDI1 1231 aa10.49□□□□□ -0.73
TOM1L1-215ENST00000572905 EVA1BQ9NVM1 165 aa10.49□□□□□ -0.73
TOM1L1-215ENST00000572905 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
TOM1L1-215ENST00000572905 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
TOM1L1-215ENST00000572905 DESI1Q6ICB0 168 aa10.48□□□□□ -0.73
TOM1L1-215ENST00000572905 LIMD1Q9UGP4 676 aa10.48□□□□□ -0.73
TOM1L1-215ENST00000572905 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
TOM1L1-215ENST00000572905 SH3BP2P78314 561 aa10.47□□□□□ -0.73
TOM1L1-215ENST00000572905 KCNH2Q12809 1159 aa10.47□□□□□ -0.73
TOM1L1-215ENST00000572905 TSC1Q92574 1164 aa10.47□□□□□ -0.73
TOM1L1-215ENST00000572905 ZNF775Q96BV0 537 aaPredicted RBP10.47□□□□□ -0.73
TOM1L1-215ENST00000572905 CTHP32929 405 aa10.46□□□□□ -0.73
TOM1L1-215ENST00000572905 BAP1Q92560 729 aa10.46□□□□□ -0.73
TOM1L1-215ENST00000572905 HPS1Q92902 700 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms