RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 IRF6O14896 467 aa8.16□□□□□ -1.1
TVP23B-205ENST00000572845 MMP16P51512 607 aa8.16□□□□□ -1.1
TVP23B-205ENST00000572845 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
TVP23B-205ENST00000572845 AXIN1O15169 862 aa8.15□□□□□ -1.1
TVP23B-205ENST00000572845 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
TVP23B-205ENST00000572845 RNF19BQ6ZMZ0 732 aa8.15□□□□□ -1.1
TVP23B-205ENST00000572845 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
TVP23B-205ENST00000572845 POTECB2RU33 542 aa8.14□□□□□ -1.11
TVP23B-205ENST00000572845 WNT7AO00755 349 aa8.14□□□□□ -1.11
TVP23B-205ENST00000572845 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
TVP23B-205ENST00000572845 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
TVP23B-205ENST00000572845 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
TVP23B-205ENST00000572845 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
TVP23B-205ENST00000572845 PRDM9Q9NQV7 894 aa8.13□□□□□ -1.11
TVP23B-205ENST00000572845 KDM2AQ9Y2K7 1162 aa8.12□□□□□ -1.11
TVP23B-205ENST00000572845 DXOO77932 396 aaKnown RBP8.11□□□□□ -1.11
TVP23B-205ENST00000572845 TRIM32Q13049 653 aa8.11□□□□□ -1.11
TVP23B-205ENST00000572845 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
TVP23B-205ENST00000572845 CLCN1P35523 988 aa8.1□□□□□ -1.11
TVP23B-205ENST00000572845 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
TVP23B-205ENST00000572845 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
TVP23B-205ENST00000572845 KRI1Q8N9T8 703 aaKnown RBP8.09□□□□□ -1.11
TVP23B-205ENST00000572845 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.11
TVP23B-205ENST00000572845 HOXA2O43364 376 aa8.07□□□□□ -1.12
TVP23B-205ENST00000572845 WNT7BP56706 349 aa8.07□□□□□ -1.12
TVP23B-205ENST00000572845 NUTM1Q86Y26 1132 aa8.07□□□□□ -1.12
TVP23B-205ENST00000572845 SMPD1P17405 629 aa8.06□□□□□ -1.12
TVP23B-205ENST00000572845 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
TVP23B-205ENST00000572845 MRGPRX2Q96LB1 330 aa8.06□□□□□ -1.12
TVP23B-205ENST00000572845 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
TVP23B-205ENST00000572845 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
TVP23B-205ENST00000572845 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
TVP23B-205ENST00000572845 FAM217BQ9NTX9 383 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-205ENST00000572845 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
TVP23B-205ENST00000572845 JUNDP17535 347 aa8.04□□□□□ -1.12
TVP23B-205ENST00000572845 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
TVP23B-205ENST00000572845 WFS1O76024 890 aa8.03□□□□□ -1.12
TVP23B-205ENST00000572845 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
TVP23B-205ENST00000572845 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
TVP23B-205ENST00000572845 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
TVP23B-205ENST00000572845 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
TVP23B-205ENST00000572845 J3QL48 77 aa8.01□□□□□ -1.13
TVP23B-205ENST00000572845 HLA-CQ95604 372 aa8□□□□□ -1.13
TVP23B-205ENST00000572845 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
TVP23B-205ENST00000572845 FDX1P10109 184 aa7.99□□□□□ -1.13
TVP23B-205ENST00000572845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
TVP23B-205ENST00000572845 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
TVP23B-205ENST00000572845 SKOR1P84550 965 aa7.98□□□□□ -1.13
TVP23B-205ENST00000572845 SPDYE5A6NIY4 337 aa7.97□□□□□ -1.13
TVP23B-205ENST00000572845 C6orf229H3BNL8 230 aa7.97□□□□□ -1.13
TVP23B-205ENST00000572845 SSTR3P32745 418 aaPredicted RBP7.97□□□□□ -1.13
TVP23B-205ENST00000572845 GUCA2AQ02747 115 aa7.97□□□□□ -1.13
TVP23B-205ENST00000572845 HPS1Q92902 700 aa7.97□□□□□ -1.13
TVP23B-205ENST00000572845 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
TVP23B-205ENST00000572845 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
TVP23B-205ENST00000572845 MS4A1P11836 297 aa7.96□□□□□ -1.14
TVP23B-205ENST00000572845 INSM1Q01101 510 aaPredicted RBP7.96□□□□□ -1.14
TVP23B-205ENST00000572845 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
TVP23B-205ENST00000572845 DIXDC1Q155Q3 683 aa7.96□□□□□ -1.14
TVP23B-205ENST00000572845 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.14
TVP23B-205ENST00000572845 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
TVP23B-205ENST00000572845 WIPF1O43516 503 aa7.95□□□□□ -1.14
TVP23B-205ENST00000572845 PTPRNQ16849 979 aa7.95□□□□□ -1.14
TVP23B-205ENST00000572845 SIAH2O43255 324 aa7.94□□□□□ -1.14
TVP23B-205ENST00000572845 SPIRE2Q8WWL2 714 aa7.94□□□□□ -1.14
TVP23B-205ENST00000572845 EVA1BQ9NVM1 165 aa7.94□□□□□ -1.14
TVP23B-205ENST00000572845 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
TVP23B-205ENST00000572845 TERTO14746 1132 aaKnown RBP7.93□□□□□ -1.14
TVP23B-205ENST00000572845 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
TVP23B-205ENST00000572845 DESI1Q6ICB0 168 aa7.93□□□□□ -1.14
TVP23B-205ENST00000572845 BARGINQ6ZT62 677 aa7.93□□□□□ -1.14
TVP23B-205ENST00000572845 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
TVP23B-205ENST00000572845 PCDHGC3Q9UN70 934 aa7.93□□□□□ -1.14
TVP23B-205ENST00000572845 PLEKHG3A1L390 1219 aa7.92□□□□□ -1.14
TVP23B-205ENST00000572845 GJA5P36382 358 aa7.92□□□□□ -1.14
TVP23B-205ENST00000572845 TTLL12Q14166 644 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-205ENST00000572845 AMHR2Q16671 573 aa7.92□□□□□ -1.14
TVP23B-205ENST00000572845 PTCRAQ6ISU1 281 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-205ENST00000572845 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
TVP23B-205ENST00000572845 MTMR2Q13614 643 aa7.91□□□□□ -1.14
TVP23B-205ENST00000572845 CAPN5O15484 640 aaPredicted RBP7.9□□□□□ -1.14
TVP23B-205ENST00000572845 ZMYND10O75800 440 aa7.9□□□□□ -1.14
TVP23B-205ENST00000572845 SH3BP2P78314 561 aa7.9□□□□□ -1.14
TVP23B-205ENST00000572845 KCNH2Q12809 1159 aa7.9□□□□□ -1.14
TVP23B-205ENST00000572845 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
TVP23B-205ENST00000572845 MPNDQ8N594 471 aa7.9□□□□□ -1.14
TVP23B-205ENST00000572845 MOXD2PA6NHM9 499 aa7.89□□□□□ -1.15
TVP23B-205ENST00000572845 VARSP26640 1264 aaKnown RBP7.89□□□□□ -1.15
TVP23B-205ENST00000572845 PRR7Q8TB68 274 aa7.89□□□□□ -1.15
TVP23B-205ENST00000572845 UNC93B1Q9H1C4 597 aa7.89□□□□□ -1.15
TVP23B-205ENST00000572845 NDUFV2P19404 249 aa7.88□□□□□ -1.15
TVP23B-205ENST00000572845 GIGYF2Q6Y7W6 1299 aaKnown RBP7.87□□□□□ -1.15
TVP23B-205ENST00000572845 BAP1Q92560 729 aa7.87□□□□□ -1.15
TVP23B-205ENST00000572845 BEGAINQ9BUH8 593 aa7.87□□□□□ -1.15
TVP23B-205ENST00000572845 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
TVP23B-205ENST00000572845 ZNF511Q8NB15 262 aa7.86□□□□□ -1.15
TVP23B-205ENST00000572845 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
TVP23B-205ENST00000572845 ZC3H15Q8WU90 426 aaKnown RBP7.85□□□□□ -1.15
TVP23B-205ENST00000572845 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
TVP23B-205ENST00000572845 CTHP32929 405 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms