RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PTPRMP28827 1452 aa21.54■■□□□ 1.04
POLR2A-201ENST00000572844 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
POLR2A-201ENST00000572844 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
POLR2A-201ENST00000572844 FBXO31Q5XUX0 539 aaPredicted RBP21.51■■□□□ 1.03
POLR2A-201ENST00000572844 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
POLR2A-201ENST00000572844 GOLGA2Q08379 1002 aa21.51■■□□□ 1.03
POLR2A-201ENST00000572844 YTHDC2Q9H6S0 1430 aaKnown RBP21.5■■□□□ 1.03
POLR2A-201ENST00000572844 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
POLR2A-201ENST00000572844 DUSP27Q5VZP5 1158 aa21.49■■□□□ 1.03
POLR2A-201ENST00000572844 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
POLR2A-201ENST00000572844 TRMT2AQ8IZ69 625 aaKnown RBP21.48■■□□□ 1.03
POLR2A-201ENST00000572844 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
POLR2A-201ENST00000572844 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
POLR2A-201ENST00000572844 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
POLR2A-201ENST00000572844 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
POLR2A-201ENST00000572844 SLFN5Q08AF3 891 aa21.47■■□□□ 1.03
POLR2A-201ENST00000572844 EXOC6Q8TAG9 804 aa21.46■■□□□ 1.03
POLR2A-201ENST00000572844 ATAD2Q6PL18 1390 aa21.46■■□□□ 1.03
POLR2A-201ENST00000572844 MYT1Q01538 1121 aa21.44■■□□□ 1.02
POLR2A-201ENST00000572844 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
POLR2A-201ENST00000572844 APAF1O14727 1248 aa21.43■■□□□ 1.02
POLR2A-201ENST00000572844 MED14O60244 1454 aa21.42■■□□□ 1.02
POLR2A-201ENST00000572844 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
POLR2A-201ENST00000572844 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
POLR2A-201ENST00000572844 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
POLR2A-201ENST00000572844 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
POLR2A-201ENST00000572844 STK26Q9P289 416 aa21.41■■□□□ 1.02
POLR2A-201ENST00000572844 E9PSI1 815 aa21.4■■□□□ 1.02
POLR2A-201ENST00000572844 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
POLR2A-201ENST00000572844 NKTRP30414 1462 aaKnown RBP21.39■■□□□ 1.02
POLR2A-201ENST00000572844 CFAP53Q96M91 514 aa21.39■■□□□ 1.01
POLR2A-201ENST00000572844 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
POLR2A-201ENST00000572844 A0A1W2PP64 1363 aa21.39■■□□□ 1.01
POLR2A-201ENST00000572844 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
POLR2A-201ENST00000572844 POGKQ9P215 609 aa21.38■■□□□ 1.01
POLR2A-201ENST00000572844 NRXN3Q9Y4C0 1643 aa21.37■■□□□ 1.01
POLR2A-201ENST00000572844 CD163L1Q9NR16 1453 aa21.37■■□□□ 1.01
POLR2A-201ENST00000572844 SRPK2P78362 688 aaKnown RBP21.36■■□□□ 1.01
POLR2A-201ENST00000572844 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
POLR2A-201ENST00000572844 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
POLR2A-201ENST00000572844 TERF2IPQ9NYB0 399 aa21.36■■□□□ 1.01
POLR2A-201ENST00000572844 MTHFSP49914 203 aa21.36■■□□□ 1.01
POLR2A-201ENST00000572844 KIF20BQ96Q89 1820 aa21.36■■□□□ 1.01
POLR2A-201ENST00000572844 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
POLR2A-201ENST00000572844 PLIN1O60240 522 aa21.35■■□□□ 1.01
POLR2A-201ENST00000572844 SAFB2Q14151 953 aaKnown RBP eCLIP21.35■■□□□ 1.01
POLR2A-201ENST00000572844 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.35■■□□□ 1.01
POLR2A-201ENST00000572844 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
POLR2A-201ENST00000572844 CRBNQ96SW2 442 aa21.34■■□□□ 1.01
POLR2A-201ENST00000572844 MINK1Q8N4C8 1332 aaPredicted RBP21.34■■□□□ 1.01
POLR2A-201ENST00000572844 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1
POLR2A-201ENST00000572844 NLRP1Q9C000 1473 aa21.33■■□□□ 1
POLR2A-201ENST00000572844 TNNT2P45379 298 aaPredicted RBP21.32■■□□□ 1
POLR2A-201ENST00000572844 WWC1Q8IX03 1113 aa21.32■■□□□ 1
POLR2A-201ENST00000572844 ADGRB2O60241 1585 aa21.31■■□□□ 1
POLR2A-201ENST00000572844 CCDC27Q2M243 656 aa21.31■■□□□ 1
POLR2A-201ENST00000572844 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
POLR2A-201ENST00000572844 ATP7BP35670 1465 aa21.3■■□□□ 1
POLR2A-201ENST00000572844 TCERG1O14776 1098 aaKnown RBP21.3■■□□□ 1
POLR2A-201ENST00000572844 MLECQ14165 292 aa21.3■■□□□ 1
POLR2A-201ENST00000572844 ANP32EQ9BTT0 268 aa21.3■■□□□ 1
POLR2A-201ENST00000572844 CDK19Q9BWU1 502 aa21.3■■□□□ 1
POLR2A-201ENST00000572844 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
POLR2A-201ENST00000572844 ESF1Q9H501 851 aaKnown RBP21.29■■□□□ 1
POLR2A-201ENST00000572844 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
POLR2A-201ENST00000572844 UBR1Q8IWV7 1749 aa21.28■■□□□ 1
POLR2A-201ENST00000572844 HDGFP51858 240 aaKnown RBP21.28■■□□□ 1
POLR2A-201ENST00000572844 WDR63Q8IWG1 891 aa21.28■■□□□ 1
POLR2A-201ENST00000572844 SIRT1Q96EB6 747 aa21.28■■□□□ 1
POLR2A-201ENST00000572844 FYB1O15117 783 aa21.27■□□□□ 0.99
POLR2A-201ENST00000572844 TCP11L2Q8N4U5 519 aa21.27■□□□□ 0.99
POLR2A-201ENST00000572844 C20orf194Q5TEA3 1177 aa21.26■□□□□ 0.99
POLR2A-201ENST00000572844 TECPR2O15040 1411 aa21.26■□□□□ 0.99
POLR2A-201ENST00000572844 TNRQ92752 1358 aa21.26■□□□□ 0.99
POLR2A-201ENST00000572844 MS4A1P11836 297 aa21.25■□□□□ 0.99
POLR2A-201ENST00000572844 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
POLR2A-201ENST00000572844 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
POLR2A-201ENST00000572844 CPS1P31327 1500 aa21.24■□□□□ 0.99
POLR2A-201ENST00000572844 MSH5O43196 834 aa21.24■□□□□ 0.99
POLR2A-201ENST00000572844 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
POLR2A-201ENST00000572844 GGNBP2Q9H3C7 697 aa21.22■□□□□ 0.99
POLR2A-201ENST00000572844 PNPLA6Q8IY17 1366 aa21.21■□□□□ 0.99
POLR2A-201ENST00000572844 CABP1Q9NZU7 370 aa21.21■□□□□ 0.99
POLR2A-201ENST00000572844 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
POLR2A-201ENST00000572844 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.99
POLR2A-201ENST00000572844 METP08581 1390 aa21.2■□□□□ 0.98
POLR2A-201ENST00000572844 U2AF1L5P0DN76 240 aaPredicted RBP21.2■□□□□ 0.98
POLR2A-201ENST00000572844 U2AF1Q01081 240 aaKnown RBP eCLIP21.2■□□□□ 0.98
POLR2A-201ENST00000572844 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
POLR2A-201ENST00000572844 WAPLQ7Z5K2 1190 aa21.19■□□□□ 0.98
POLR2A-201ENST00000572844 CPSF1Q10570 1443 aaKnown RBP21.19■□□□□ 0.98
POLR2A-201ENST00000572844 PDE3AQ14432 1141 aa21.19■□□□□ 0.98
POLR2A-201ENST00000572844 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
POLR2A-201ENST00000572844 MON2Q7Z3U7 1717 aa21.18■□□□□ 0.98
POLR2A-201ENST00000572844 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
POLR2A-201ENST00000572844 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
POLR2A-201ENST00000572844 AKAP12Q02952 1782 aa21.17■□□□□ 0.98
POLR2A-201ENST00000572844 WASLO00401 505 aaPredicted RBP21.17■□□□□ 0.98
POLR2A-201ENST00000572844 BCAR3O75815 825 aa21.16■□□□□ 0.98
POLR2A-201ENST00000572844 PLEKHF1Q96S99 279 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms