RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 SIRT1Q96EB6 747 aa25.26■■□□□ 1.63
ATP2A3-212ENST00000572694 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
ATP2A3-212ENST00000572694 TMEM132EQ6IEE7 984 aa25.24■■□□□ 1.63
ATP2A3-212ENST00000572694 STK26Q9P289 416 aa25.24■■□□□ 1.63
ATP2A3-212ENST00000572694 RXRBP28702 533 aa25.23■■□□□ 1.63
ATP2A3-212ENST00000572694 WAPLQ7Z5K2 1190 aa25.23■■□□□ 1.63
ATP2A3-212ENST00000572694 CDC42BPGQ6DT37 1551 aa25.22■■□□□ 1.63
ATP2A3-212ENST00000572694 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
ATP2A3-212ENST00000572694 AFF2P51816 1311 aa25.22■■□□□ 1.63
ATP2A3-212ENST00000572694 ESCO1Q5FWF5 840 aa25.21■■□□□ 1.63
ATP2A3-212ENST00000572694 HRCP23327 699 aa25.2■■□□□ 1.62
ATP2A3-212ENST00000572694 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.62
ATP2A3-212ENST00000572694 KNDC1Q76NI1 1749 aa25.19■■□□□ 1.62
ATP2A3-212ENST00000572694 NRXN1Q9ULB1 1477 aa25.19■■□□□ 1.62
ATP2A3-212ENST00000572694 NPHP3Q7Z494 1330 aa25.18■■□□□ 1.62
ATP2A3-212ENST00000572694 CDK12Q9NYV4 1490 aaPredicted RBP25.18■■□□□ 1.62
ATP2A3-212ENST00000572694 C8orf37Q96NL8 207 aa25.17■■□□□ 1.62
ATP2A3-212ENST00000572694 MYOM2P54296 1465 aa25.16■■□□□ 1.62
ATP2A3-212ENST00000572694 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
ATP2A3-212ENST00000572694 CFAP70Q5T0N1 1121 aa25.15■■□□□ 1.62
ATP2A3-212ENST00000572694 QTRT2Q9H974 415 aaKnown RBP25.15■■□□□ 1.62
ATP2A3-212ENST00000572694 PLEKHH1Q9ULM0 1364 aa25.15■■□□□ 1.62
ATP2A3-212ENST00000572694 NGLY1Q96IV0 654 aa25.14■■□□□ 1.62
ATP2A3-212ENST00000572694 FOXO3O43524 673 aa25.13■■□□□ 1.61
ATP2A3-212ENST00000572694 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
ATP2A3-212ENST00000572694 RBM6P78332 1123 aaKnown RBP25.12■■□□□ 1.61
ATP2A3-212ENST00000572694 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
ATP2A3-212ENST00000572694 COL22A1Q8NFW1 1626 aaPredicted RBP25.12■■□□□ 1.61
ATP2A3-212ENST00000572694 PXDNQ92626 1479 aa25.1■■□□□ 1.61
ATP2A3-212ENST00000572694 FNBP4Q8N3X1 1017 aaPredicted RBP25.1■■□□□ 1.61
ATP2A3-212ENST00000572694 UPF1Q92900 1129 aaKnown RBP eCLIP25.1■■□□□ 1.61
ATP2A3-212ENST00000572694 NUTM2FA1L443 756 aa25.08■■□□□ 1.61
ATP2A3-212ENST00000572694 FMN2Q9NZ56 1722 aa25.08■■□□□ 1.61
ATP2A3-212ENST00000572694 USP21Q9UK80 565 aa25.05■■□□□ 1.6
ATP2A3-212ENST00000572694 DLC1Q96QB1 1528 aa25.03■■□□□ 1.6
ATP2A3-212ENST00000572694 XPCQ01831 940 aaPredicted RBP25.03■■□□□ 1.6
ATP2A3-212ENST00000572694 PRAM1Q96QH2 718 aa25.03■■□□□ 1.6
ATP2A3-212ENST00000572694 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
ATP2A3-212ENST00000572694 KIF1AQ12756 1690 aa25.02■■□□□ 1.6
ATP2A3-212ENST00000572694 SPATA31A3Q5VYP0 1347 aa25.02■■□□□ 1.6
ATP2A3-212ENST00000572694 KRT28Q7Z3Y7 464 aa25.01■■□□□ 1.59
ATP2A3-212ENST00000572694 DCAF11Q8TEB1 546 aa25.01■■□□□ 1.59
ATP2A3-212ENST00000572694 PHF8Q9UPP1 1060 aa25.01■■□□□ 1.59
ATP2A3-212ENST00000572694 POGKQ9P215 609 aa25■■□□□ 1.59
ATP2A3-212ENST00000572694 ADGRB1O14514 1584 aa24.99■■□□□ 1.59
ATP2A3-212ENST00000572694 RGPD8O14715 1765 aaPredicted RBP24.99■■□□□ 1.59
ATP2A3-212ENST00000572694 RGS12O14924 1447 aa24.98■■□□□ 1.59
ATP2A3-212ENST00000572694 PSME1Q06323 249 aa24.98■■□□□ 1.59
ATP2A3-212ENST00000572694 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
ATP2A3-212ENST00000572694 MARF1Q9Y4F3 1742 aaKnown RBP24.97■■□□□ 1.59
ATP2A3-212ENST00000572694 ATRNO75882 1429 aa24.96■■□□□ 1.59
ATP2A3-212ENST00000572694 SAFB2Q14151 953 aaKnown RBP eCLIP24.96■■□□□ 1.59
ATP2A3-212ENST00000572694 BCL9LQ86UU0 1499 aa24.96■■□□□ 1.59
ATP2A3-212ENST00000572694 TRAK1Q9UPV9 953 aa24.95■■□□□ 1.58
ATP2A3-212ENST00000572694 ANKARQ7Z5J8 1434 aa24.95■■□□□ 1.58
ATP2A3-212ENST00000572694 SBNO1A3KN83 1393 aa24.93■■□□□ 1.58
ATP2A3-212ENST00000572694 ADGRB2O60241 1585 aa24.92■■□□□ 1.58
ATP2A3-212ENST00000572694 TNS3Q68CZ2 1445 aa24.89■■□□□ 1.58
ATP2A3-212ENST00000572694 GJD4Q96KN9 370 aaPredicted RBP24.89■■□□□ 1.58
ATP2A3-212ENST00000572694 UNC5CLQ8IV45 518 aa24.88■■□□□ 1.57
ATP2A3-212ENST00000572694 SLIT2O94813 1529 aa24.87■■□□□ 1.57
ATP2A3-212ENST00000572694 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
ATP2A3-212ENST00000572694 WASLO00401 505 aaPredicted RBP24.87■■□□□ 1.57
ATP2A3-212ENST00000572694 EIF3AQ14152 1382 aaKnown RBP24.87■■□□□ 1.57
ATP2A3-212ENST00000572694 ARHGEF10O15013 1369 aa24.86■■□□□ 1.57
ATP2A3-212ENST00000572694 PMFBP1Q8TBY8 1022 aa24.86■■□□□ 1.57
ATP2A3-212ENST00000572694 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
ATP2A3-212ENST00000572694 ATAD2Q6PL18 1390 aa24.85■■□□□ 1.57
ATP2A3-212ENST00000572694 HIRIP3Q9BW71 556 aaPredicted RBP24.85■■□□□ 1.57
ATP2A3-212ENST00000572694 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.85■■□□□ 1.57
ATP2A3-212ENST00000572694 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.56
ATP2A3-212ENST00000572694 CABLES1Q8TDN4 633 aa24.82■■□□□ 1.56
ATP2A3-212ENST00000572694 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
ATP2A3-212ENST00000572694 TULP4Q9NRJ4 1543 aa24.81■■□□□ 1.56
ATP2A3-212ENST00000572694 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
ATP2A3-212ENST00000572694 LMOD2Q6P5Q4 547 aa24.8■■□□□ 1.56
ATP2A3-212ENST00000572694 CCDC125Q86Z20 511 aa24.78■■□□□ 1.56
ATP2A3-212ENST00000572694 VPS72Q15906 364 aa24.77■■□□□ 1.56
ATP2A3-212ENST00000572694 ARHGEF28Q8N1W1 1705 aaKnown RBP24.77■■□□□ 1.56
ATP2A3-212ENST00000572694 KIAA1210Q9ULL0 1709 aa24.77■■□□□ 1.56
ATP2A3-212ENST00000572694 TRPM3Q9HCF6 1732 aaPredicted RBP24.76■■□□□ 1.55
ATP2A3-212ENST00000572694 RALGAPBQ86X10 1494 aa24.76■■□□□ 1.55
ATP2A3-212ENST00000572694 FAM83GA6ND36 823 aa24.75■■□□□ 1.55
ATP2A3-212ENST00000572694 ONECUT3O60422 494 aaPredicted RBP24.75■■□□□ 1.55
ATP2A3-212ENST00000572694 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
ATP2A3-212ENST00000572694 NUDT16Q96DE0 195 aaKnown RBP24.74■■□□□ 1.55
ATP2A3-212ENST00000572694 GLI3P10071 1580 aa24.74■■□□□ 1.55
ATP2A3-212ENST00000572694 NWD2Q9ULI1 1742 aa24.74■■□□□ 1.55
ATP2A3-212ENST00000572694 ABCA3Q99758 1704 aa24.73■■□□□ 1.55
ATP2A3-212ENST00000572694 ALS2Q96Q42 1657 aa24.72■■□□□ 1.55
ATP2A3-212ENST00000572694 CDK19Q9BWU1 502 aa24.72■■□□□ 1.55
ATP2A3-212ENST00000572694 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.54
ATP2A3-212ENST00000572694 PLEKHG5O94827 1062 aa24.69■■□□□ 1.54
ATP2A3-212ENST00000572694 ATP7BP35670 1465 aa24.69■■□□□ 1.54
ATP2A3-212ENST00000572694 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
ATP2A3-212ENST00000572694 CCDC61Q9Y6R9 512 aa24.68■■□□□ 1.54
ATP2A3-212ENST00000572694 ITSN1Q15811 1721 aa24.68■■□□□ 1.54
ATP2A3-212ENST00000572694 PLEKHG3A1L390 1219 aa24.67■■□□□ 1.54
ATP2A3-212ENST00000572694 SEPT12Q8IYM1 358 aa24.67■■□□□ 1.54
ATP2A3-212ENST00000572694 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms