RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 NUTM2DQ5VT03 806 aaPredicted RBP6.37□□□□□ -1.39
NDE1-204ENST00000572503 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
NDE1-204ENST00000572503 POLR3GLQ9BT43 218 aa6.37□□□□□ -1.39
NDE1-204ENST00000572503 MRS2Q9HD23 443 aa6.37□□□□□ -1.39
NDE1-204ENST00000572503 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
NDE1-204ENST00000572503 CEP170BQ9Y4F5 1589 aaPredicted RBP6.36□□□□□ -1.39
NDE1-204ENST00000572503 CD163L1Q9NR16 1453 aa6.36□□□□□ -1.39
NDE1-204ENST00000572503 FAM135BQ49AJ0 1406 aa6.36□□□□□ -1.39
NDE1-204ENST00000572503 PLEKHG1Q9ULL1 1385 aa6.36□□□□□ -1.39
NDE1-204ENST00000572503 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.36□□□□□ -1.39
NDE1-204ENST00000572503 SHPRHQ149N8 1683 aa6.36□□□□□ -1.39
NDE1-204ENST00000572503 TOPAZ1Q8N9V7 1692 aa6.36□□□□□ -1.39
NDE1-204ENST00000572503 BLMP54132 1417 aaPredicted RBP6.35□□□□□ -1.39
NDE1-204ENST00000572503 METP08581 1390 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 NINLQ9Y2I6 1382 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 NLRP13Q86W25 1043 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.35□□□□□ -1.39
NDE1-204ENST00000572503 SIRT1Q96EB6 747 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 CARD14Q9BXL6 1004 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 GTF3C3Q9Y5Q9 886 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 AKAP12Q02952 1782 aa6.35□□□□□ -1.39
NDE1-204ENST00000572503 KIF20BQ96Q89 1820 aa6.34□□□□□ -1.39
NDE1-204ENST00000572503 ANKRD36BQ8N2N9 1353 aa6.34□□□□□ -1.39
NDE1-204ENST00000572503 PLEKHH1Q9ULM0 1364 aa6.34□□□□□ -1.39
NDE1-204ENST00000572503 MON2Q7Z3U7 1717 aa6.34□□□□□ -1.39
NDE1-204ENST00000572503 ZBED9Q6R2W3 1325 aa6.34□□□□□ -1.39
NDE1-204ENST00000572503 TRHP20396 242 aaPredicted RBP6.34□□□□□ -1.39
NDE1-204ENST00000572503 PTPRUQ92729 1446 aa6.33□□□□□ -1.4
NDE1-204ENST00000572503 EVC2Q86UK5 1308 aa6.33□□□□□ -1.4
NDE1-204ENST00000572503 LTKP29376 864 aa6.33□□□□□ -1.4
NDE1-204ENST00000572503 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
NDE1-204ENST00000572503 ESF1Q9H501 851 aaKnown RBP6.33□□□□□ -1.4
NDE1-204ENST00000572503 CHD2O14647 1828 aaKnown RBP6.33□□□□□ -1.4
NDE1-204ENST00000572503 ATP7BP35670 1465 aa6.33□□□□□ -1.4
NDE1-204ENST00000572503 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
NDE1-204ENST00000572503 ATAD2Q6PL18 1390 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 CDC42BPGQ6DT37 1551 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 NRKQ7Z2Y5 1582 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.4
NDE1-204ENST00000572503 PLPPR3Q6T4P5 718 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 PRAM1Q96QH2 718 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 PTCH1Q13635 1447 aa6.32□□□□□ -1.4
NDE1-204ENST00000572503 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 NSD2O96028 1365 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 ITSN1Q15811 1721 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
NDE1-204ENST00000572503 FAM9BQ8IZU0 186 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 SLC12A5Q9H2X9 1139 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 STAG3Q9UJ98 1225 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 KNSTRNQ9Y448 316 aa6.31□□□□□ -1.4
NDE1-204ENST00000572503 CPSF1Q10570 1443 aaKnown RBP6.31□□□□□ -1.4
NDE1-204ENST00000572503 COL3A1P02461 1466 aaPredicted RBP6.3□□□□□ -1.4
NDE1-204ENST00000572503 TMC1Q8TDI8 760 aa6.3□□□□□ -1.4
NDE1-204ENST00000572503 STK26Q9P289 416 aa6.3□□□□□ -1.4
NDE1-204ENST00000572503 SMG6Q86US8 1419 aaKnown RBP6.3□□□□□ -1.4
NDE1-204ENST00000572503 POLR3AO14802 1390 aaPredicted RBP6.3□□□□□ -1.4
NDE1-204ENST00000572503 PIK3R4Q99570 1358 aa6.3□□□□□ -1.4
NDE1-204ENST00000572503 MINK1Q8N4C8 1332 aaPredicted RBP6.29□□□□□ -1.4
NDE1-204ENST00000572503 HDGFP51858 240 aaKnown RBP6.29□□□□□ -1.4
NDE1-204ENST00000572503 NWD1Q149M9 1564 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 NALCNQ8IZF0 1738 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 CABP2Q9NPB3 220 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 FMN2Q9NZ56 1722 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 TBX22Q9Y458 520 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 USP54Q70EL1 1684 aa6.29□□□□□ -1.4
NDE1-204ENST00000572503 RGPD8O14715 1765 aaPredicted RBP6.29□□□□□ -1.4
NDE1-204ENST00000572503 WAPLQ7Z5K2 1190 aa6.28□□□□□ -1.4
NDE1-204ENST00000572503 THEMISQ8N1K5 641 aaPredicted RBP6.28□□□□□ -1.4
NDE1-204ENST00000572503 CDK19Q9BWU1 502 aa6.28□□□□□ -1.4
NDE1-204ENST00000572503 NKTRP30414 1462 aaKnown RBP6.28□□□□□ -1.4
NDE1-204ENST00000572503 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
NDE1-204ENST00000572503 MARF1Q9Y4F3 1742 aaKnown RBP6.28□□□□□ -1.4
NDE1-204ENST00000572503 RNF123Q5XPI4 1314 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 PRR36Q9H6K5 1346 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 MAP2P11137 1827 aaKnown RBP6.27□□□□□ -1.41
NDE1-204ENST00000572503 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
NDE1-204ENST00000572503 SAFB2Q14151 953 aaKnown RBP eCLIP6.27□□□□□ -1.41
NDE1-204ENST00000572503 LHX8Q68G74 356 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 CHRDL2Q6WN34 429 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 TXNDC2Q86VQ3 553 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 POGKQ9P215 609 aa6.27□□□□□ -1.41
NDE1-204ENST00000572503 SUPT16HQ9Y5B9 1047 aaKnown RBP6.27□□□□□ -1.41
NDE1-204ENST00000572503 CGNL1Q0VF96 1302 aa6.26□□□□□ -1.41
NDE1-204ENST00000572503 ZNF521Q96K83 1311 aa6.26□□□□□ -1.41
NDE1-204ENST00000572503 EDC4Q6P2E9 1401 aaKnown RBP6.26□□□□□ -1.41
NDE1-204ENST00000572503 SSH2Q76I76 1423 aa6.26□□□□□ -1.41
NDE1-204ENST00000572503 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
NDE1-204ENST00000572503 PPIP5K1Q6PFW1 1433 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 LRRC7Q96NW7 1537 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 NUDCQ9Y266 331 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 EID1Q9Y6B2 187 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 PNPLA6Q8IY17 1366 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 ANKARQ7Z5J8 1434 aa6.25□□□□□ -1.41
NDE1-204ENST00000572503 FYB1O15117 783 aa6.24□□□□□ -1.41
NDE1-204ENST00000572503 SRPK2P78362 688 aaKnown RBP6.24□□□□□ -1.41
NDE1-204ENST00000572503 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
NDE1-204ENST00000572503 CABP1Q9NZU7 370 aa6.24□□□□□ -1.41
NDE1-204ENST00000572503 ADAMTS8Q9UP79 889 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms