RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 PNPLA6Q8IY17 1366 aa30.53■■■□□ 2.48
LITAF-205ENST00000570904 ABCC11Q96J66 1382 aa30.52■■■□□ 2.48
LITAF-205ENST00000570904 PLEKHH1Q9ULM0 1364 aa30.52■■■□□ 2.48
LITAF-205ENST00000570904 KNDC1Q76NI1 1749 aa30.51■■■□□ 2.47
LITAF-205ENST00000570904 LAMC1P11047 1609 aa30.51■■■□□ 2.47
LITAF-205ENST00000570904 NRXN1Q9ULB1 1477 aa30.5■■■□□ 2.47
LITAF-205ENST00000570904 YTHDC2Q9H6S0 1430 aaKnown RBP30.5■■■□□ 2.47
LITAF-205ENST00000570904 MYOM2P54296 1465 aa30.5■■■□□ 2.47
LITAF-205ENST00000570904 ZNF772Q68DY9 489 aaPredicted RBP30.49■■■□□ 2.47
LITAF-205ENST00000570904 C14orf93Q9H972 538 aaKnown RBP30.47■■■□□ 2.47
LITAF-205ENST00000570904 SOS2Q07890 1332 aaPredicted RBP30.47■■■□□ 2.47
LITAF-205ENST00000570904 CFAP70Q5T0N1 1121 aa30.46■■■□□ 2.47
LITAF-205ENST00000570904 ESCO1Q5FWF5 840 aa30.45■■■□□ 2.47
LITAF-205ENST00000570904 NUTM2FA1L443 756 aa30.43■■■□□ 2.46
LITAF-205ENST00000570904 AFF2P51816 1311 aa30.43■■■□□ 2.46
LITAF-205ENST00000570904 C8orf37Q96NL8 207 aa30.4■■■□□ 2.46
LITAF-205ENST00000570904 DHX57Q6P158 1386 aaKnown RBP30.4■■■□□ 2.46
LITAF-205ENST00000570904 HRCP23327 699 aa30.38■■■□□ 2.45
LITAF-205ENST00000570904 NPHP3Q7Z494 1330 aa30.38■■■□□ 2.45
LITAF-205ENST00000570904 ADAMTS2O95450 1211 aa30.36■■■□□ 2.45
LITAF-205ENST00000570904 SIRT1Q96EB6 747 aa30.36■■■□□ 2.45
LITAF-205ENST00000570904 PXDNQ92626 1479 aa30.36■■■□□ 2.45
LITAF-205ENST00000570904 FMN2Q9NZ56 1722 aa30.36■■■□□ 2.45
LITAF-205ENST00000570904 FOXO3O43524 673 aa30.35■■■□□ 2.45
LITAF-205ENST00000570904 XPCQ01831 940 aaPredicted RBP30.35■■■□□ 2.45
LITAF-205ENST00000570904 RXRBP28702 533 aa30.33■■■□□ 2.45
LITAF-205ENST00000570904 SAFB2Q14151 953 aaKnown RBP eCLIP30.33■■■□□ 2.45
LITAF-205ENST00000570904 KDM2AQ9Y2K7 1162 aa30.33■■■□□ 2.45
LITAF-205ENST00000570904 PRAM1Q96QH2 718 aa30.32■■■□□ 2.44
LITAF-205ENST00000570904 COL22A1Q8NFW1 1626 aaPredicted RBP30.3■■■□□ 2.44
LITAF-205ENST00000570904 ADGRB1O14514 1584 aa30.3■■■□□ 2.44
LITAF-205ENST00000570904 DCAF11Q8TEB1 546 aa30.3■■■□□ 2.44
LITAF-205ENST00000570904 DLC1Q96QB1 1528 aa30.28■■■□□ 2.44
LITAF-205ENST00000570904 NGLY1Q96IV0 654 aa30.28■■■□□ 2.44
LITAF-205ENST00000570904 QTRT2Q9H974 415 aaKnown RBP30.25■■■□□ 2.43
LITAF-205ENST00000570904 POGKQ9P215 609 aa30.25■■■□□ 2.43
LITAF-205ENST00000570904 KIF1AQ12756 1690 aa30.25■■■□□ 2.43
LITAF-205ENST00000570904 TRAK1Q9UPV9 953 aa30.24■■■□□ 2.43
LITAF-205ENST00000570904 CDK12Q9NYV4 1490 aaPredicted RBP30.24■■■□□ 2.43
LITAF-205ENST00000570904 PHF8Q9UPP1 1060 aa30.2■■■□□ 2.43
LITAF-205ENST00000570904 RGPD8O14715 1765 aaPredicted RBP30.2■■■□□ 2.42
LITAF-205ENST00000570904 RBM6P78332 1123 aaKnown RBP30.19■■■□□ 2.42
LITAF-205ENST00000570904 USP21Q9UK80 565 aa30.19■■■□□ 2.42
LITAF-205ENST00000570904 RGS12O14924 1447 aa30.19■■■□□ 2.42
LITAF-205ENST00000570904 KRT28Q7Z3Y7 464 aa30.18■■■□□ 2.42
LITAF-205ENST00000570904 STAC3Q96MF2 364 aa30.18■■■□□ 2.42
LITAF-205ENST00000570904 ADGRB2O60241 1585 aa30.18■■■□□ 2.42
LITAF-205ENST00000570904 SPATA31A3Q5VYP0 1347 aa30.18■■■□□ 2.42
LITAF-205ENST00000570904 HIRIP3Q9BW71 556 aaPredicted RBP30.17■■■□□ 2.42
LITAF-205ENST00000570904 FNBP4Q8N3X1 1017 aaPredicted RBP30.16■■■□□ 2.42
LITAF-205ENST00000570904 MINK1Q8N4C8 1332 aaPredicted RBP30.15■■■□□ 2.42
LITAF-205ENST00000570904 USP32Q8NFA0 1604 aa30.14■■■□□ 2.42
LITAF-205ENST00000570904 UPF1Q92900 1129 aaKnown RBP eCLIP30.14■■■□□ 2.426e-7■■□□□ 13.5
LITAF-205ENST00000570904 ANKARQ7Z5J8 1434 aa30.13■■■□□ 2.41
LITAF-205ENST00000570904 TRPC5Q9UL62 973 aaPredicted RBP30.12■■■□□ 2.41
LITAF-205ENST00000570904 TNS3Q68CZ2 1445 aa30.12■■■□□ 2.41
LITAF-205ENST00000570904 MARF1Q9Y4F3 1742 aaKnown RBP30.1■■■□□ 2.41
LITAF-205ENST00000570904 PMFBP1Q8TBY8 1022 aa30.1■■■□□ 2.41
LITAF-205ENST00000570904 ATRNO75882 1429 aa30.1■■■□□ 2.41
LITAF-205ENST00000570904 PSME1Q06323 249 aa30.09■■■□□ 2.41
LITAF-205ENST00000570904 BCL9LQ86UU0 1499 aa30.07■■■□□ 2.4
LITAF-205ENST00000570904 PRR36Q9H6K5 1346 aa30.07■■■□□ 2.4
LITAF-205ENST00000570904 SBNO1A3KN83 1393 aa30.06■■■□□ 2.4
LITAF-205ENST00000570904 ARHGEF28Q8N1W1 1705 aaKnown RBP30.06■■■□□ 2.4
LITAF-205ENST00000570904 TULP4Q9NRJ4 1543 aa30.06■■■□□ 2.4
LITAF-205ENST00000570904 WASLO00401 505 aaPredicted RBP30.05■■■□□ 2.4
LITAF-205ENST00000570904 PLEKHG5O94827 1062 aa30.05■■■□□ 2.4
LITAF-205ENST00000570904 EIF3AQ14152 1382 aaKnown RBP30.04■■■□□ 2.4
LITAF-205ENST00000570904 LMOD2Q6P5Q4 547 aa30.04■■■□□ 2.4
LITAF-205ENST00000570904 CABLES1Q8TDN4 633 aa30.03■■■□□ 2.4
LITAF-205ENST00000570904 HAP1P54257 671 aaPredicted RBP30.01■■■□□ 2.39
LITAF-205ENST00000570904 ARHGEF10O15013 1369 aa30■■■□□ 2.39
LITAF-205ENST00000570904 SLIT2O94813 1529 aa29.99■■■□□ 2.39
LITAF-205ENST00000570904 TRPM3Q9HCF6 1732 aaPredicted RBP29.97■■■□□ 2.39
LITAF-205ENST00000570904 KIAA1210Q9ULL0 1709 aa29.97■■■□□ 2.39
LITAF-205ENST00000570904 ABCA3Q99758 1704 aa29.96■■■□□ 2.39
LITAF-205ENST00000570904 NBPF1Q3BBV0 1214 aa29.96■■■□□ 2.39
LITAF-205ENST00000570904 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.96■■■□□ 2.39
LITAF-205ENST00000570904 GPRASP1Q5JY77 1395 aa29.95■■■□□ 2.39
LITAF-205ENST00000570904 UNC5CLQ8IV45 518 aa29.95■■■□□ 2.39
LITAF-205ENST00000570904 ATP7BP35670 1465 aa29.94■■■□□ 2.38
LITAF-205ENST00000570904 GJD4Q96KN9 370 aaPredicted RBP29.94■■■□□ 2.38
LITAF-205ENST00000570904 NGDNQ8NEJ9 315 aaKnown RBP29.93■■■□□ 2.38
LITAF-205ENST00000570904 ATAD2Q6PL18 1390 aa29.91■■■□□ 2.38
LITAF-205ENST00000570904 NUDT16Q96DE0 195 aaKnown RBP29.91■■■□□ 2.38
LITAF-205ENST00000570904 RALGAPBQ86X10 1494 aa29.9■■■□□ 2.38
LITAF-205ENST00000570904 ALS2Q96Q42 1657 aa29.9■■■□□ 2.38
LITAF-205ENST00000570904 CDK19Q9BWU1 502 aa29.89■■■□□ 2.38
LITAF-205ENST00000570904 GLI3P10071 1580 aa29.89■■■□□ 2.38
LITAF-205ENST00000570904 ITSN1Q15811 1721 aa29.88■■■□□ 2.37
LITAF-205ENST00000570904 PLCH1Q4KWH8 1693 aa29.88■■■□□ 2.37
LITAF-205ENST00000570904 L3MBTL2Q969R5 705 aa29.87■■■□□ 2.37
LITAF-205ENST00000570904 SIN3AQ96ST3 1273 aa29.87■■■□□ 2.37
LITAF-205ENST00000570904 PAK3O75914 559 aaPredicted RBP29.86■■■□□ 2.37
LITAF-205ENST00000570904 EP400Q96L91 3159 aa29.83■■■□□ 2.37
LITAF-205ENST00000570904 NWD2Q9ULI1 1742 aa29.83■■■□□ 2.37
LITAF-205ENST00000570904 FAM83GA6ND36 823 aa29.83■■■□□ 2.37
LITAF-205ENST00000570904 VPS72Q15906 364 aa29.82■■■□□ 2.36
LITAF-205ENST00000570904 TOPAZ1Q8N9V7 1692 aa29.82■■■□□ 2.36
LITAF-205ENST00000570904 CENPJQ9HC77 1338 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms