RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
NDE1-203ENST00000570727 LRPPRCP42704 1394 aaKnown RBP22■■□□□ 1.11
NDE1-203ENST00000570727 UPF1Q92900 1129 aaKnown RBP eCLIP22■■□□□ 1.11
NDE1-203ENST00000570727 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
NDE1-203ENST00000570727 TECPR2O15040 1411 aa21.99■■□□□ 1.11
NDE1-203ENST00000570727 ADAMTS2O95450 1211 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 ESCO1Q5FWF5 840 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 QTRT2Q9H974 415 aaKnown RBP21.98■■□□□ 1.11
NDE1-203ENST00000570727 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
NDE1-203ENST00000570727 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
NDE1-203ENST00000570727 CDK12Q9NYV4 1490 aaPredicted RBP21.97■■□□□ 1.11
NDE1-203ENST00000570727 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
NDE1-203ENST00000570727 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
NDE1-203ENST00000570727 PLEKHH1Q9ULM0 1364 aa21.96■■□□□ 1.11
NDE1-203ENST00000570727 NUTM2FA1L443 756 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 FOXO3O43524 673 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 C14orf93Q9H972 538 aaKnown RBP21.94■■□□□ 1.1
NDE1-203ENST00000570727 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
NDE1-203ENST00000570727 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
NDE1-203ENST00000570727 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
NDE1-203ENST00000570727 YTHDC2Q9H6S0 1430 aaKnown RBP21.93■■□□□ 1.1
NDE1-203ENST00000570727 COL22A1Q8NFW1 1626 aaPredicted RBP21.92■■□□□ 1.1
NDE1-203ENST00000570727 PXDNQ92626 1479 aa21.92■■□□□ 1.1
NDE1-203ENST00000570727 SIRT1Q96EB6 747 aa21.92■■□□□ 1.1
NDE1-203ENST00000570727 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
NDE1-203ENST00000570727 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 CFAP70Q5T0N1 1121 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
NDE1-203ENST00000570727 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
NDE1-203ENST00000570727 RGS12O14924 1447 aa21.89■■□□□ 1.09
NDE1-203ENST00000570727 USP21Q9UK80 565 aa21.88■■□□□ 1.09
NDE1-203ENST00000570727 MYOM2P54296 1465 aa21.88■■□□□ 1.09
NDE1-203ENST00000570727 FMN2Q9NZ56 1722 aa21.87■■□□□ 1.09
NDE1-203ENST00000570727 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
NDE1-203ENST00000570727 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
NDE1-203ENST00000570727 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
NDE1-203ENST00000570727 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
NDE1-203ENST00000570727 SPATA31A3Q5VYP0 1347 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 ATRNO75882 1429 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
NDE1-203ENST00000570727 BCL9LQ86UU0 1499 aa21.8■■□□□ 1.08
NDE1-203ENST00000570727 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
NDE1-203ENST00000570727 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
NDE1-203ENST00000570727 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
NDE1-203ENST00000570727 HRCP23327 699 aa21.76■■□□□ 1.07
NDE1-203ENST00000570727 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 POGKQ9P215 609 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 EP400Q96L91 3159 aa21.75■■□□□ 1.07
NDE1-203ENST00000570727 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
NDE1-203ENST00000570727 TRAK1Q9UPV9 953 aa21.74■■□□□ 1.07
NDE1-203ENST00000570727 PSME1Q06323 249 aa21.73■■□□□ 1.07
NDE1-203ENST00000570727 GJD4Q96KN9 370 aaPredicted RBP21.73■■□□□ 1.07
NDE1-203ENST00000570727 USP32Q8NFA0 1604 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 CABLES1Q8TDN4 633 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 ATAD2Q6PL18 1390 aa21.71■■□□□ 1.07
NDE1-203ENST00000570727 SLIT2O94813 1529 aa21.7■■□□□ 1.07
NDE1-203ENST00000570727 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 SBNO1A3KN83 1393 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
NDE1-203ENST00000570727 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.69■■□□□ 1.06
NDE1-203ENST00000570727 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
NDE1-203ENST00000570727 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
NDE1-203ENST00000570727 ADGRB2O60241 1585 aa21.68■■□□□ 1.06
NDE1-203ENST00000570727 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
NDE1-203ENST00000570727 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 PLEKHG5O94827 1062 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 GLI3P10071 1580 aa21.65■■□□□ 1.06
NDE1-203ENST00000570727 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.06
NDE1-203ENST00000570727 HAP1P54257 671 aaPredicted RBP21.64■■□□□ 1.05
NDE1-203ENST00000570727 ARHGEF10O15013 1369 aa21.63■■□□□ 1.05
NDE1-203ENST00000570727 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
NDE1-203ENST00000570727 FAM83GA6ND36 823 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 SRCAPQ6ZRS2 3230 aa21.62■■□□□ 1.05
NDE1-203ENST00000570727 TRPM3Q9HCF6 1732 aaPredicted RBP21.61■■□□□ 1.05
NDE1-203ENST00000570727 VPS72Q15906 364 aa21.6■■□□□ 1.05
NDE1-203ENST00000570727 TULP4Q9NRJ4 1543 aa21.6■■□□□ 1.05
NDE1-203ENST00000570727 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
NDE1-203ENST00000570727 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
NDE1-203ENST00000570727 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
NDE1-203ENST00000570727 NWD2Q9ULI1 1742 aa21.58■■□□□ 1.05
NDE1-203ENST00000570727 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
NDE1-203ENST00000570727 ARHGEF28Q8N1W1 1705 aaKnown RBP21.58■■□□□ 1.04
NDE1-203ENST00000570727 ALS2Q96Q42 1657 aa21.57■■□□□ 1.04
NDE1-203ENST00000570727 ONECUT3O60422 494 aaPredicted RBP21.57■■□□□ 1.04
NDE1-203ENST00000570727 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
NDE1-203ENST00000570727 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
NDE1-203ENST00000570727 NGDNQ8NEJ9 315 aaKnown RBP21.55■■□□□ 1.04
NDE1-203ENST00000570727 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
NDE1-203ENST00000570727 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
NDE1-203ENST00000570727 CCDC9Q9Y3X0 531 aaKnown RBP21.52■■□□□ 1.04
NDE1-203ENST00000570727 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
NDE1-203ENST00000570727 BTG4Q9NY30 223 aa21.51■■□□□ 1.03
NDE1-203ENST00000570727 ATP7BP35670 1465 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms