RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 KRT27Q7Z3Y8 459 aa15.46■□□□□ 0.07
RBFOX1-221ENST00000570626 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
RBFOX1-221ENST00000570626 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
RBFOX1-221ENST00000570626 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
RBFOX1-221ENST00000570626 ABCC5O15440 1437 aa15.44■□□□□ 0.06
RBFOX1-221ENST00000570626 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
RBFOX1-221ENST00000570626 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
RBFOX1-221ENST00000570626 TNS1Q9HBL0 1735 aaKnown RBP15.43■□□□□ 0.06
RBFOX1-221ENST00000570626 METP08581 1390 aa15.43■□□□□ 0.06
RBFOX1-221ENST00000570626 PXDNQ92626 1479 aa15.43■□□□□ 0.06
RBFOX1-221ENST00000570626 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
RBFOX1-221ENST00000570626 CEP350Q5VT06 3117 aa15.42■□□□□ 0.06
RBFOX1-221ENST00000570626 DISP2A7MBM2 1401 aa15.41■□□□□ 0.06
RBFOX1-221ENST00000570626 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
RBFOX1-221ENST00000570626 USP32Q8NFA0 1604 aa15.39■□□□□ 0.05
RBFOX1-221ENST00000570626 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
RBFOX1-221ENST00000570626 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
RBFOX1-221ENST00000570626 VPS72Q15906 364 aa15.38■□□□□ 0.05
RBFOX1-221ENST00000570626 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
RBFOX1-221ENST00000570626 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-221ENST00000570626 UTRNP46939 3433 aa15.36■□□□□ 0.05
RBFOX1-221ENST00000570626 DAPK1P53355 1430 aa15.36■□□□□ 0.05
RBFOX1-221ENST00000570626 ADGRL2O95490 1459 aa15.36■□□□□ 0.05
RBFOX1-221ENST00000570626 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-221ENST00000570626 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
RBFOX1-221ENST00000570626 NWD2Q9ULI1 1742 aa15.35■□□□□ 0.05
RBFOX1-221ENST00000570626 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
RBFOX1-221ENST00000570626 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-221ENST00000570626 E9PCH4 1651 aa15.34■□□□□ 0.05
RBFOX1-221ENST00000570626 ADGRB2O60241 1585 aa15.33■□□□□ 0.05
RBFOX1-221ENST00000570626 A0A0G2JS52 829 aa15.33■□□□□ 0.04
RBFOX1-221ENST00000570626 MYT1Q01538 1121 aa15.33■□□□□ 0.04
RBFOX1-221ENST00000570626 FAM182BQ5T319 152 aa15.33■□□□□ 0.04
RBFOX1-221ENST00000570626 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
RBFOX1-221ENST00000570626 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.04
RBFOX1-221ENST00000570626 RREB1Q92766 1687 aa15.32■□□□□ 0.04
RBFOX1-221ENST00000570626 NUP188Q5SRE5 1749 aa15.32■□□□□ 0.04
RBFOX1-221ENST00000570626 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
RBFOX1-221ENST00000570626 CHIC2Q9UKJ5 165 aa15.31■□□□□ 0.04
RBFOX1-221ENST00000570626 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
RBFOX1-221ENST00000570626 FOXO3O43524 673 aa15.29■□□□□ 0.04
RBFOX1-221ENST00000570626 SPON1Q9HCB6 807 aa15.29■□□□□ 0.04
RBFOX1-221ENST00000570626 FAM98CQ17RN3 349 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-221ENST00000570626 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
RBFOX1-221ENST00000570626 NRAPQ86VF7 1730 aa15.28■□□□□ 0.04
RBFOX1-221ENST00000570626 ABCA3Q99758 1704 aa15.27■□□□□ 0.04
RBFOX1-221ENST00000570626 CDC42BPGQ6DT37 1551 aa15.27■□□□□ 0.03
RBFOX1-221ENST00000570626 KCNQ2O43526 872 aa15.26■□□□□ 0.03
RBFOX1-221ENST00000570626 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
RBFOX1-221ENST00000570626 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
RBFOX1-221ENST00000570626 KANK4Q5T7N3 995 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-221ENST00000570626 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
RBFOX1-221ENST00000570626 CHD4Q14839 1912 aa15.24■□□□□ 0.03
RBFOX1-221ENST00000570626 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
RBFOX1-221ENST00000570626 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
RBFOX1-221ENST00000570626 ANKRD50Q9ULJ7 1429 aa15.23■□□□□ 0.03
RBFOX1-221ENST00000570626 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
RBFOX1-221ENST00000570626 TRIM37O94972 964 aa15.22■□□□□ 0.03
RBFOX1-221ENST00000570626 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
RBFOX1-221ENST00000570626 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
RBFOX1-221ENST00000570626 CABLES1Q8TDN4 633 aa15.21■□□□□ 0.03
RBFOX1-221ENST00000570626 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
RBFOX1-221ENST00000570626 MYOM1P52179 1685 aa15.2■□□□□ 0.02
RBFOX1-221ENST00000570626 APBA3O96018 575 aa15.2■□□□□ 0.02
RBFOX1-221ENST00000570626 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
RBFOX1-221ENST00000570626 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
RBFOX1-221ENST00000570626 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
RBFOX1-221ENST00000570626 CCDC144AA2RUR9 1427 aa15.18■□□□□ 0.02
RBFOX1-221ENST00000570626 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-221ENST00000570626 ZNF326Q5BKZ1 582 aaKnown RBP15.18■□□□□ 0.02
RBFOX1-221ENST00000570626 KIF1AQ12756 1690 aa15.18■□□□□ 0.02
RBFOX1-221ENST00000570626 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
RBFOX1-221ENST00000570626 TNS3Q68CZ2 1445 aa15.17■□□□□ 0.02
RBFOX1-221ENST00000570626 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
RBFOX1-221ENST00000570626 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
RBFOX1-221ENST00000570626 NAIPQ13075 1403 aa15.15■□□□□ 0.02
RBFOX1-221ENST00000570626 MSH5O43196 834 aa15.14■□□□□ 0.01
RBFOX1-221ENST00000570626 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
RBFOX1-221ENST00000570626 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
RBFOX1-221ENST00000570626 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
RBFOX1-221ENST00000570626 FAM196AQ6ZSG2 479 aa15.13■□□□□ 0.01
RBFOX1-221ENST00000570626 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
RBFOX1-221ENST00000570626 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
RBFOX1-221ENST00000570626 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
RBFOX1-221ENST00000570626 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
RBFOX1-221ENST00000570626 PTGER2P43116 358 aa15.09■□□□□ 0.01
RBFOX1-221ENST00000570626 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
RBFOX1-221ENST00000570626 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
RBFOX1-221ENST00000570626 PDGFDQ9GZP0 370 aaPredicted RBP15.08■□□□□ 0
RBFOX1-221ENST00000570626 RRBP1Q9P2E9 1410 aaKnown RBP15.08■□□□□ 0
RBFOX1-221ENST00000570626 SYT17Q9BSW7 474 aa15.07■□□□□ 0
RBFOX1-221ENST00000570626 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
RBFOX1-221ENST00000570626 ANO8Q9HCE9 1232 aaPredicted RBP15.07■□□□□ 0
RBFOX1-221ENST00000570626 SBNO1A3KN83 1393 aa15.07■□□□□ 0
RBFOX1-221ENST00000570626 ARHGEF10O15013 1369 aa15.07■□□□□ 0
RBFOX1-221ENST00000570626 DLC1Q96QB1 1528 aa15.07■□□□□ 0
RBFOX1-221ENST00000570626 ZBTB7AO95365 584 aa15.06■□□□□ 0
RBFOX1-221ENST00000570626 LMOD2Q6P5Q4 547 aa15.06■□□□□ 0
RBFOX1-221ENST00000570626 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
RBFOX1-221ENST00000570626 RGPD3A6NKT7 1758 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms