RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 TECPR2O15040 1411 aa31.03■■■□□ 2.56
RPA1-202ENST00000570451 CDC42BPGQ6DT37 1551 aa31.02■■■□□ 2.56
RPA1-202ENST00000570451 ABCC11Q96J66 1382 aa31.01■■■□□ 2.55
RPA1-202ENST00000570451 ESCO1Q5FWF5 840 aa31■■■□□ 2.55
RPA1-202ENST00000570451 YTHDC2Q9H6S0 1430 aaKnown RBP30.99■■■□□ 2.55
RPA1-202ENST00000570451 PLEKHH1Q9ULM0 1364 aa30.99■■■□□ 2.55
RPA1-202ENST00000570451 NUTM2FA1L443 756 aa30.98■■■□□ 2.55
RPA1-202ENST00000570451 KNDC1Q76NI1 1749 aa30.98■■■□□ 2.55
RPA1-202ENST00000570451 LAMC1P11047 1609 aa30.98■■■□□ 2.55
RPA1-202ENST00000570451 AFF2P51816 1311 aa30.97■■■□□ 2.55
RPA1-202ENST00000570451 SOS2Q07890 1332 aaPredicted RBP30.97■■■□□ 2.55
RPA1-202ENST00000570451 MYOM2P54296 1465 aa30.96■■■□□ 2.55
RPA1-202ENST00000570451 CFAP70Q5T0N1 1121 aa30.96■■■□□ 2.55
RPA1-202ENST00000570451 C8orf37Q96NL8 207 aa30.96■■■□□ 2.55
RPA1-202ENST00000570451 C14orf93Q9H972 538 aaKnown RBP30.96■■■□□ 2.55
RPA1-202ENST00000570451 NRXN1Q9ULB1 1477 aa30.95■■■□□ 2.54
RPA1-202ENST00000570451 ADAMTS2O95450 1211 aa30.92■■■□□ 2.54
RPA1-202ENST00000570451 DHX57Q6P158 1386 aaKnown RBP30.92■■■□□ 2.54
RPA1-202ENST00000570451 NPHP3Q7Z494 1330 aa30.91■■■□□ 2.54
RPA1-202ENST00000570451 RXRBP28702 533 aa30.9■■■□□ 2.54
RPA1-202ENST00000570451 XPCQ01831 940 aaPredicted RBP30.89■■■□□ 2.54
RPA1-202ENST00000570451 FOXO3O43524 673 aa30.88■■■□□ 2.53
RPA1-202ENST00000570451 SAFB2Q14151 953 aaKnown RBP eCLIP30.86■■■□□ 2.53
RPA1-202ENST00000570451 NGLY1Q96IV0 654 aa30.86■■■□□ 2.53
RPA1-202ENST00000570451 KDM2AQ9Y2K7 1162 aa30.86■■■□□ 2.53
RPA1-202ENST00000570451 SIRT1Q96EB6 747 aa30.85■■■□□ 2.53
RPA1-202ENST00000570451 FMN2Q9NZ56 1722 aa30.84■■■□□ 2.53
RPA1-202ENST00000570451 HRCP23327 699 aa30.84■■■□□ 2.53
RPA1-202ENST00000570451 PXDNQ92626 1479 aa30.83■■■□□ 2.53
RPA1-202ENST00000570451 DCAF11Q8TEB1 546 aa30.83■■■□□ 2.53
RPA1-202ENST00000570451 PRAM1Q96QH2 718 aa30.83■■■□□ 2.53
RPA1-202ENST00000570451 QTRT2Q9H974 415 aaKnown RBP30.81■■■□□ 2.52
RPA1-202ENST00000570451 POGKQ9P215 609 aa30.81■■■□□ 2.52
RPA1-202ENST00000570451 COL22A1Q8NFW1 1626 aaPredicted RBP30.79■■■□□ 2.52
RPA1-202ENST00000570451 TRAK1Q9UPV9 953 aa30.76■■■□□ 2.51
RPA1-202ENST00000570451 KIF1AQ12756 1690 aa30.76■■■□□ 2.51
RPA1-202ENST00000570451 CDK12Q9NYV4 1490 aaPredicted RBP30.76■■■□□ 2.51
RPA1-202ENST00000570451 DLC1Q96QB1 1528 aa30.75■■■□□ 2.51
RPA1-202ENST00000570451 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
RPA1-202ENST00000570451 RBM6P78332 1123 aaKnown RBP30.74■■■□□ 2.51
RPA1-202ENST00000570451 USP21Q9UK80 565 aa30.74■■■□□ 2.51
RPA1-202ENST00000570451 KRT28Q7Z3Y7 464 aa30.72■■■□□ 2.51
RPA1-202ENST00000570451 PHF8Q9UPP1 1060 aa30.72■■■□□ 2.51
RPA1-202ENST00000570451 RGPD8O14715 1765 aaPredicted RBP30.71■■■□□ 2.51
RPA1-202ENST00000570451 STAC3Q96MF2 364 aa30.69■■■□□ 2.5
RPA1-202ENST00000570451 HIRIP3Q9BW71 556 aaPredicted RBP30.69■■■□□ 2.5
RPA1-202ENST00000570451 RGS12O14924 1447 aa30.69■■■□□ 2.5
RPA1-202ENST00000570451 UPF1Q92900 1129 aaKnown RBP eCLIP30.68■■■□□ 2.5
RPA1-202ENST00000570451 SPATA31A3Q5VYP0 1347 aa30.68■■■□□ 2.5
RPA1-202ENST00000570451 FNBP4Q8N3X1 1017 aaPredicted RBP30.67■■■□□ 2.5
RPA1-202ENST00000570451 MINK1Q8N4C8 1332 aaPredicted RBP30.67■■■□□ 2.5
RPA1-202ENST00000570451 TRPC5Q9UL62 973 aaPredicted RBP30.66■■■□□ 2.5
RPA1-202ENST00000570451 PSME1Q06323 249 aa30.65■■■□□ 2.5
RPA1-202ENST00000570451 PLEKHG5O94827 1062 aa30.64■■■□□ 2.5
RPA1-202ENST00000570451 ADGRB2O60241 1585 aa30.63■■■□□ 2.49
RPA1-202ENST00000570451 PMFBP1Q8TBY8 1022 aa30.63■■■□□ 2.49
RPA1-202ENST00000570451 ANKARQ7Z5J8 1434 aa30.63■■■□□ 2.49
RPA1-202ENST00000570451 TNS3Q68CZ2 1445 aa30.62■■■□□ 2.49
RPA1-202ENST00000570451 MARF1Q9Y4F3 1742 aaKnown RBP30.61■■■□□ 2.49
RPA1-202ENST00000570451 HAP1P54257 671 aaPredicted RBP30.61■■■□□ 2.49
RPA1-202ENST00000570451 LMOD2Q6P5Q4 547 aa30.61■■■□□ 2.49
RPA1-202ENST00000570451 USP32Q8NFA0 1604 aa30.6■■■□□ 2.49
RPA1-202ENST00000570451 ATRNO75882 1429 aa30.59■■■□□ 2.49
RPA1-202ENST00000570451 EIF3AQ14152 1382 aaKnown RBP30.57■■■□□ 2.48
RPA1-202ENST00000570451 BCL9LQ86UU0 1499 aa30.57■■■□□ 2.48
RPA1-202ENST00000570451 SBNO1A3KN83 1393 aa30.55■■■□□ 2.48
RPA1-202ENST00000570451 WASLO00401 505 aaPredicted RBP30.55■■■□□ 2.48
RPA1-202ENST00000570451 CABLES1Q8TDN4 633 aa30.55■■■□□ 2.48
RPA1-202ENST00000570451 TULP4Q9NRJ4 1543 aa30.53■■■□□ 2.48
RPA1-202ENST00000570451 PRR36Q9H6K5 1346 aa30.53■■■□□ 2.48
RPA1-202ENST00000570451 ARHGEF28Q8N1W1 1705 aaKnown RBP30.53■■■□□ 2.48
RPA1-202ENST00000570451 ARHGEF10O15013 1369 aa30.53■■■□□ 2.48
RPA1-202ENST00000570451 GPRASP1Q5JY77 1395 aa30.5■■■□□ 2.47
RPA1-202ENST00000570451 UNC5CLQ8IV45 518 aa30.49■■■□□ 2.47
RPA1-202ENST00000570451 GJD4Q96KN9 370 aaPredicted RBP30.48■■■□□ 2.47
RPA1-202ENST00000570451 ATAD2Q6PL18 1390 aa30.47■■■□□ 2.47
RPA1-202ENST00000570451 NGDNQ8NEJ9 315 aaKnown RBP30.47■■■□□ 2.47
RPA1-202ENST00000570451 SLIT2O94813 1529 aa30.47■■■□□ 2.47
RPA1-202ENST00000570451 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.45■■■□□ 2.47
RPA1-202ENST00000570451 KIAA1210Q9ULL0 1709 aa30.44■■■□□ 2.46
RPA1-202ENST00000570451 ABCA3Q99758 1704 aa30.44■■■□□ 2.46
RPA1-202ENST00000570451 NBPF1Q3BBV0 1214 aa30.43■■■□□ 2.46
RPA1-202ENST00000570451 TRPM3Q9HCF6 1732 aaPredicted RBP30.42■■■□□ 2.46
RPA1-202ENST00000570451 PAK3O75914 559 aaPredicted RBP30.42■■■□□ 2.46
RPA1-202ENST00000570451 NUDT16Q96DE0 195 aaKnown RBP30.42■■■□□ 2.46
RPA1-202ENST00000570451 CDK19Q9BWU1 502 aa30.41■■■□□ 2.46
RPA1-202ENST00000570451 RALGAPBQ86X10 1494 aa30.41■■■□□ 2.46
RPA1-202ENST00000570451 ATP7BP35670 1465 aa30.4■■■□□ 2.46
RPA1-202ENST00000570451 EP400Q96L91 3159 aa30.4■■■□□ 2.46
RPA1-202ENST00000570451 PLCH1Q4KWH8 1693 aa30.39■■■□□ 2.45
RPA1-202ENST00000570451 ITSN1Q15811 1721 aa30.39■■■□□ 2.45
RPA1-202ENST00000570451 CCDC9Q9Y3X0 531 aaKnown RBP30.38■■■□□ 2.45
RPA1-202ENST00000570451 GLI3P10071 1580 aa30.37■■■□□ 2.45
RPA1-202ENST00000570451 ALS2Q96Q42 1657 aa30.37■■■□□ 2.45
RPA1-202ENST00000570451 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
RPA1-202ENST00000570451 VPS72Q15906 364 aa30.34■■■□□ 2.45
RPA1-202ENST00000570451 NWD2Q9ULI1 1742 aa30.33■■■□□ 2.45
RPA1-202ENST00000570451 L3MBTL2Q969R5 705 aa30.33■■■□□ 2.45
RPA1-202ENST00000570451 SIN3AQ96ST3 1273 aa30.33■■■□□ 2.45
RPA1-202ENST00000570451 NEUROD1Q13562 356 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms