RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 UNC13BO14795 1591 aa10.7□□□□□ -0.7
TCF4-246ENST00000570287 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 USP47Q96K76 1375 aa10.69□□□□□ -0.7
TCF4-246ENST00000570287 KIAA1522Q9P206 1035 aaPredicted RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 NOP58Q9Y2X3 529 aaKnown RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 KDM5CP41229 1560 aa10.69□□□□□ -0.7
TCF4-246ENST00000570287 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 PRKRIP1Q9H875 184 aaPredicted RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 BRPF3Q9ULD4 1205 aa10.69□□□□□ -0.7
TCF4-246ENST00000570287 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
TCF4-246ENST00000570287 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.68□□□□□ -0.7
TCF4-246ENST00000570287 PLCH2O75038 1416 aa10.67□□□□□ -0.7
TCF4-246ENST00000570287 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
TCF4-246ENST00000570287 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
TCF4-246ENST00000570287 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
TCF4-246ENST00000570287 BCORL1Q5H9F3 1711 aa10.66□□□□□ -0.7
TCF4-246ENST00000570287 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
TCF4-246ENST00000570287 RFX1P22670 979 aa10.66□□□□□ -0.7
TCF4-246ENST00000570287 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
TCF4-246ENST00000570287 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
TCF4-246ENST00000570287 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
TCF4-246ENST00000570287 AAMPQ13685 434 aa10.65□□□□□ -0.7
TCF4-246ENST00000570287 PCMTD1Q96MG8 357 aaPredicted RBP10.65□□□□□ -0.7
TCF4-246ENST00000570287 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
TCF4-246ENST00000570287 IQGAP3Q86VI3 1631 aa10.65□□□□□ -0.7
TCF4-246ENST00000570287 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
TCF4-246ENST00000570287 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.71
TCF4-246ENST00000570287 AMHR2Q16671 573 aa10.65□□□□□ -0.71
TCF4-246ENST00000570287 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.71
TCF4-246ENST00000570287 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 ABCC1P33527 1531 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 ARAP3Q8WWN8 1544 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 MAGI2Q86UL8 1455 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
TCF4-246ENST00000570287 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
TCF4-246ENST00000570287 KDM4AO75164 1064 aa10.63□□□□□ -0.71
TCF4-246ENST00000570287 CARD11Q9BXL7 1154 aa10.63□□□□□ -0.71
TCF4-246ENST00000570287 FBXO31Q5XUX0 539 aaPredicted RBP10.63□□□□□ -0.71
TCF4-246ENST00000570287 IRF6O14896 467 aa10.62□□□□□ -0.71
TCF4-246ENST00000570287 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
TCF4-246ENST00000570287 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
TCF4-246ENST00000570287 DCAF11Q8TEB1 546 aa10.62□□□□□ -0.71
TCF4-246ENST00000570287 DHX29Q7Z478 1369 aaKnown RBP10.62□□□□□ -0.71
TCF4-246ENST00000570287 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
TCF4-246ENST00000570287 ATP10AO60312 1499 aa10.62□□□□□ -0.71
TCF4-246ENST00000570287 PLA2R1Q13018 1463 aa10.62□□□□□ -0.71
TCF4-246ENST00000570287 CCDC184Q52MB2 194 aa10.61□□□□□ -0.71
TCF4-246ENST00000570287 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
TCF4-246ENST00000570287 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
TCF4-246ENST00000570287 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
TCF4-246ENST00000570287 BRD1O95696 1058 aa10.6□□□□□ -0.71
TCF4-246ENST00000570287 SND1Q7KZF4 910 aaKnown RBP eCLIP10.6□□□□□ -0.71
TCF4-246ENST00000570287 PRAG1Q86YV5 1406 aa10.6□□□□□ -0.71
TCF4-246ENST00000570287 TRPM1Q7Z4N2 1603 aa10.6□□□□□ -0.71
TCF4-246ENST00000570287 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
TCF4-246ENST00000570287 RTEL1-TNFRSF6BF6WH68 1400 aa10.6□□□□□ -0.71
TCF4-246ENST00000570287 TMED8Q6PL24 325 aaPredicted RBP10.59□□□□□ -0.71
TCF4-246ENST00000570287 ZNF592Q92610 1267 aa10.59□□□□□ -0.71
TCF4-246ENST00000570287 TRAPPC8Q9Y2L5 1435 aa10.59□□□□□ -0.71
TCF4-246ENST00000570287 MRRFQ96E11 262 aaKnown RBP10.59□□□□□ -0.71
TCF4-246ENST00000570287 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
TCF4-246ENST00000570287 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
TCF4-246ENST00000570287 PCDHB8Q9UN66 801 aa10.59□□□□□ -0.71
TCF4-246ENST00000570287 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
TCF4-246ENST00000570287 PCDHB13Q9Y5F0 798 aa10.59□□□□□ -0.71
TCF4-246ENST00000570287 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
TCF4-246ENST00000570287 LAMC1P11047 1609 aa10.58□□□□□ -0.72
TCF4-246ENST00000570287 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
TCF4-246ENST00000570287 ST20-MTHFSA0A0A6YYL1 179 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 A2MP01023 1474 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 WDR7Q9Y4E6 1490 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 GLMNQ92990 594 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 IPO9Q96P70 1041 aaKnown RBP10.57□□□□□ -0.72
TCF4-246ENST00000570287 POLR3EQ9NVU0 708 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 ZBED9Q6R2W3 1325 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 DPYSL4O14531 572 aa10.57□□□□□ -0.72
TCF4-246ENST00000570287 EIF2AK4Q9P2K8 1649 aaKnown RBP10.56□□□□□ -0.72
TCF4-246ENST00000570287 ZFYVE16Q7Z3T8 1539 aa10.56□□□□□ -0.72
TCF4-246ENST00000570287 SPAG9O60271 1321 aaKnown RBP10.56□□□□□ -0.72
TCF4-246ENST00000570287 KCNA1Q09470 495 aa10.56□□□□□ -0.72
TCF4-246ENST00000570287 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
TCF4-246ENST00000570287 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
TCF4-246ENST00000570287 E9PCH4 1651 aa10.55□□□□□ -0.72
TCF4-246ENST00000570287 ZNF526Q8TF50 670 aaPredicted RBP10.55□□□□□ -0.72
TCF4-246ENST00000570287 KTN1Q86UP2 1357 aaKnown RBP10.55□□□□□ -0.72
TCF4-246ENST00000570287 PPP1R1BQ9UD71 204 aaPredicted RBP10.55□□□□□ -0.72
TCF4-246ENST00000570287 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
TCF4-246ENST00000570287 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
TCF4-246ENST00000570287 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms