RNA–Protein interactions for RNA: ENST00000570205.1

CPEB1-206, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-206ENST00000570205 PIP4K2BP78356 416 aa13.66□□□□□ -0.22
CPEB1-206ENST00000570205 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
CPEB1-206ENST00000570205 ROCK2O75116 1388 aaKnown RBP13.66□□□□□ -0.22
CPEB1-206ENST00000570205 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
CPEB1-206ENST00000570205 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
CPEB1-206ENST00000570205 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
CPEB1-206ENST00000570205 TRAK1Q9UPV9 953 aa13.65□□□□□ -0.22
CPEB1-206ENST00000570205 MST1RQ04912 1400 aa13.64□□□□□ -0.23
CPEB1-206ENST00000570205 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
CPEB1-206ENST00000570205 WAPLQ7Z5K2 1190 aa13.64□□□□□ -0.23
CPEB1-206ENST00000570205 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
CPEB1-206ENST00000570205 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
CPEB1-206ENST00000570205 ANKARQ7Z5J8 1434 aa13.62□□□□□ -0.23
CPEB1-206ENST00000570205 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
CPEB1-206ENST00000570205 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
CPEB1-206ENST00000570205 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
CPEB1-206ENST00000570205 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
CPEB1-206ENST00000570205 CENPJQ9HC77 1338 aaPredicted RBP13.61□□□□□ -0.23
CPEB1-206ENST00000570205 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
CPEB1-206ENST00000570205 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
CPEB1-206ENST00000570205 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
CPEB1-206ENST00000570205 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
CPEB1-206ENST00000570205 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
CPEB1-206ENST00000570205 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
CPEB1-206ENST00000570205 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
CPEB1-206ENST00000570205 HSPA1LP34931 641 aa13.57□□□□□ -0.24
CPEB1-206ENST00000570205 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
CPEB1-206ENST00000570205 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
CPEB1-206ENST00000570205 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPEB1-206ENST00000570205 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
CPEB1-206ENST00000570205 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
CPEB1-206ENST00000570205 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
CPEB1-206ENST00000570205 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
CPEB1-206ENST00000570205 ITSN1Q15811 1721 aa13.54□□□□□ -0.24
CPEB1-206ENST00000570205 ESCO1Q5FWF5 840 aa13.54□□□□□ -0.24
CPEB1-206ENST00000570205 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
CPEB1-206ENST00000570205 JCADQ9P266 1359 aa13.53□□□□□ -0.24
CPEB1-206ENST00000570205 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CPEB1-206ENST00000570205 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
CPEB1-206ENST00000570205 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
CPEB1-206ENST00000570205 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
CPEB1-206ENST00000570205 HIRIP3Q9BW71 556 aaPredicted RBP13.51□□□□□ -0.25
CPEB1-206ENST00000570205 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
CPEB1-206ENST00000570205 ATP7BP35670 1465 aa13.5□□□□□ -0.25
CPEB1-206ENST00000570205 PSME1Q06323 249 aa13.5□□□□□ -0.25
CPEB1-206ENST00000570205 PUS7Q96PZ0 661 aaKnown RBP13.5□□□□□ -0.25
CPEB1-206ENST00000570205 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
CPEB1-206ENST00000570205 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
CPEB1-206ENST00000570205 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
CPEB1-206ENST00000570205 ATAD2Q6PL18 1390 aa13.49□□□□□ -0.25
CPEB1-206ENST00000570205 USP47Q96K76 1375 aa13.49□□□□□ -0.25
CPEB1-206ENST00000570205 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
CPEB1-206ENST00000570205 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
CPEB1-206ENST00000570205 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
CPEB1-206ENST00000570205 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
CPEB1-206ENST00000570205 BRD4O60885 1362 aaPredicted RBP13.47□□□□□ -0.25
CPEB1-206ENST00000570205 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
CPEB1-206ENST00000570205 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
CPEB1-206ENST00000570205 CDCA8Q53HL2 280 aa13.47□□□□□ -0.25
CPEB1-206ENST00000570205 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
CPEB1-206ENST00000570205 PXDNQ92626 1479 aa13.47□□□□□ -0.25
CPEB1-206ENST00000570205 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
CPEB1-206ENST00000570205 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
CPEB1-206ENST00000570205 FOXO3O43524 673 aa13.46□□□□□ -0.25
CPEB1-206ENST00000570205 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
CPEB1-206ENST00000570205 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
CPEB1-206ENST00000570205 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
CPEB1-206ENST00000570205 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
CPEB1-206ENST00000570205 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
CPEB1-206ENST00000570205 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
CPEB1-206ENST00000570205 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
CPEB1-206ENST00000570205 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
CPEB1-206ENST00000570205 TMF1P82094 1093 aa13.43□□□□□ -0.26
CPEB1-206ENST00000570205 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
CPEB1-206ENST00000570205 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
CPEB1-206ENST00000570205 PNPLA6Q8IY17 1366 aa13.43□□□□□ -0.26
CPEB1-206ENST00000570205 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
CPEB1-206ENST00000570205 TESK2Q96S53 571 aa13.42□□□□□ -0.26
CPEB1-206ENST00000570205 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
CPEB1-206ENST00000570205 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
CPEB1-206ENST00000570205 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
CPEB1-206ENST00000570205 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
CPEB1-206ENST00000570205 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
CPEB1-206ENST00000570205 ACEP12821 1306 aa13.39□□□□□ -0.27
CPEB1-206ENST00000570205 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
CPEB1-206ENST00000570205 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
CPEB1-206ENST00000570205 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
CPEB1-206ENST00000570205 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
CPEB1-206ENST00000570205 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
CPEB1-206ENST00000570205 USP6P35125 1406 aa13.37□□□□□ -0.27
CPEB1-206ENST00000570205 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
CPEB1-206ENST00000570205 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
CPEB1-206ENST00000570205 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
CPEB1-206ENST00000570205 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
CPEB1-206ENST00000570205 CPSF1Q10570 1443 aaKnown RBP13.35□□□□□ -0.27
CPEB1-206ENST00000570205 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
CPEB1-206ENST00000570205 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
CPEB1-206ENST00000570205 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
CPEB1-206ENST00000570205 DISP3Q9P2K9 1392 aa13.33□□□□□ -0.27
CPEB1-206ENST00000570205 LRP6O75581 1613 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms