RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
GCOM1-213ENST00000569945 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
GCOM1-213ENST00000569945 PDE4AP27815 886 aa18.61■□□□□ 0.57
GCOM1-213ENST00000569945 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
GCOM1-213ENST00000569945 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
GCOM1-213ENST00000569945 BACH2Q9BYV9 841 aa18.61■□□□□ 0.57
GCOM1-213ENST00000569945 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
GCOM1-213ENST00000569945 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
GCOM1-213ENST00000569945 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
GCOM1-213ENST00000569945 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
GCOM1-213ENST00000569945 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
GCOM1-213ENST00000569945 ROCK2O75116 1388 aaKnown RBP18.59■□□□□ 0.57
GCOM1-213ENST00000569945 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.57
GCOM1-213ENST00000569945 GLIPR1L2Q4G1C9 344 aa18.58■□□□□ 0.56
GCOM1-213ENST00000569945 ZMYND15Q9H091 742 aa18.58■□□□□ 0.56
GCOM1-213ENST00000569945 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
GCOM1-213ENST00000569945 STRCQ7RTU9 1775 aa18.58■□□□□ 0.56
GCOM1-213ENST00000569945 METP08581 1390 aa18.58■□□□□ 0.56
GCOM1-213ENST00000569945 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
GCOM1-213ENST00000569945 POLR1AO95602 1720 aaPredicted RBP18.57■□□□□ 0.56
GCOM1-213ENST00000569945 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
GCOM1-213ENST00000569945 SETD1AO15047 1707 aaKnown RBP18.56■□□□□ 0.56
GCOM1-213ENST00000569945 CARD11Q9BXL7 1154 aa18.56■□□□□ 0.56
GCOM1-213ENST00000569945 MS4A1P11836 297 aa18.55■□□□□ 0.56
GCOM1-213ENST00000569945 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
GCOM1-213ENST00000569945 STK26Q9P289 416 aa18.55■□□□□ 0.56
GCOM1-213ENST00000569945 MED14O60244 1454 aa18.54■□□□□ 0.56
GCOM1-213ENST00000569945 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
GCOM1-213ENST00000569945 GPRASP1Q5JY77 1395 aa18.52■□□□□ 0.56
GCOM1-213ENST00000569945 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
GCOM1-213ENST00000569945 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
GCOM1-213ENST00000569945 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
GCOM1-213ENST00000569945 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
GCOM1-213ENST00000569945 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
GCOM1-213ENST00000569945 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
GCOM1-213ENST00000569945 LAMC1P11047 1609 aa18.49■□□□□ 0.55
GCOM1-213ENST00000569945 YTHDC2Q9H6S0 1430 aaKnown RBP18.48■□□□□ 0.55
GCOM1-213ENST00000569945 USP47Q96K76 1375 aa18.47■□□□□ 0.55
GCOM1-213ENST00000569945 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
GCOM1-213ENST00000569945 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
GCOM1-213ENST00000569945 AMOTL2Q9Y2J4 779 aa18.45■□□□□ 0.54
GCOM1-213ENST00000569945 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
GCOM1-213ENST00000569945 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
GCOM1-213ENST00000569945 WAPLQ7Z5K2 1190 aa18.44■□□□□ 0.54
GCOM1-213ENST00000569945 KCNA6P17658 529 aa18.44■□□□□ 0.54
GCOM1-213ENST00000569945 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
GCOM1-213ENST00000569945 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
GCOM1-213ENST00000569945 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
GCOM1-213ENST00000569945 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
GCOM1-213ENST00000569945 RRAGDQ9NQL2 400 aaPredicted RBP18.42■□□□□ 0.54
GCOM1-213ENST00000569945 PRAM1Q96QH2 718 aa18.41■□□□□ 0.54
GCOM1-213ENST00000569945 ABCC11Q96J66 1382 aa18.41■□□□□ 0.54
GCOM1-213ENST00000569945 PODXL2Q9NZ53 605 aa18.4■□□□□ 0.54
GCOM1-213ENST00000569945 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
GCOM1-213ENST00000569945 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
GCOM1-213ENST00000569945 ZNF335Q9H4Z2 1342 aaPredicted RBP18.4■□□□□ 0.54
GCOM1-213ENST00000569945 EXOC6Q8TAG9 804 aa18.4■□□□□ 0.54
GCOM1-213ENST00000569945 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
GCOM1-213ENST00000569945 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
GCOM1-213ENST00000569945 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
GCOM1-213ENST00000569945 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
GCOM1-213ENST00000569945 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
GCOM1-213ENST00000569945 TESK2Q96S53 571 aa18.38■□□□□ 0.53
GCOM1-213ENST00000569945 TECPR2O15040 1411 aa18.37■□□□□ 0.53
GCOM1-213ENST00000569945 POGKQ9P215 609 aa18.37■□□□□ 0.53
GCOM1-213ENST00000569945 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
GCOM1-213ENST00000569945 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
GCOM1-213ENST00000569945 FRAT2O75474 233 aaPredicted RBP18.35■□□□□ 0.53
GCOM1-213ENST00000569945 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
GCOM1-213ENST00000569945 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
GCOM1-213ENST00000569945 CPS1P31327 1500 aa18.35■□□□□ 0.53
GCOM1-213ENST00000569945 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
GCOM1-213ENST00000569945 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
GCOM1-213ENST00000569945 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
GCOM1-213ENST00000569945 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
GCOM1-213ENST00000569945 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
GCOM1-213ENST00000569945 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
GCOM1-213ENST00000569945 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
GCOM1-213ENST00000569945 HSP90AA2PQ14568 343 aaPredicted RBP18.32■□□□□ 0.52
GCOM1-213ENST00000569945 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
GCOM1-213ENST00000569945 PTCH1Q13635 1447 aa18.31■□□□□ 0.52
GCOM1-213ENST00000569945 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
GCOM1-213ENST00000569945 FAM135BQ49AJ0 1406 aa18.31■□□□□ 0.52
GCOM1-213ENST00000569945 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
GCOM1-213ENST00000569945 SIRT1Q96EB6 747 aa18.31■□□□□ 0.52
GCOM1-213ENST00000569945 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
GCOM1-213ENST00000569945 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
GCOM1-213ENST00000569945 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
GCOM1-213ENST00000569945 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
GCOM1-213ENST00000569945 CABP2Q9NPB3 220 aa18.26■□□□□ 0.51
GCOM1-213ENST00000569945 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
GCOM1-213ENST00000569945 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
GCOM1-213ENST00000569945 LRRC7Q96NW7 1537 aa18.24■□□□□ 0.51
GCOM1-213ENST00000569945 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
GCOM1-213ENST00000569945 TMF1P82094 1093 aa18.24■□□□□ 0.51
GCOM1-213ENST00000569945 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
GCOM1-213ENST00000569945 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
GCOM1-213ENST00000569945 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
GCOM1-213ENST00000569945 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
GCOM1-213ENST00000569945 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms