RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
LINC01654-201ENST00000569711 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01654-201ENST00000569711 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
LINC01654-201ENST00000569711 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
LINC01654-201ENST00000569711 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
LINC01654-201ENST00000569711 FRMPD1Q5SYB0 1578 aa13.85□□□□□ -0.19
LINC01654-201ENST00000569711 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
LINC01654-201ENST00000569711 ABCC3O15438 1527 aa13.84□□□□□ -0.19
LINC01654-201ENST00000569711 NEFMP07197 916 aa13.84□□□□□ -0.19
LINC01654-201ENST00000569711 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
LINC01654-201ENST00000569711 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
LINC01654-201ENST00000569711 PIK3C2BO00750 1634 aa13.84□□□□□ -0.19
LINC01654-201ENST00000569711 CD109Q6YHK3 1445 aa13.83□□□□□ -0.2
LINC01654-201ENST00000569711 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
LINC01654-201ENST00000569711 ARHGAP31Q2M1Z3 1444 aa13.83□□□□□ -0.2
LINC01654-201ENST00000569711 NEO1Q92859 1461 aa13.83□□□□□ -0.2
LINC01654-201ENST00000569711 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
LINC01654-201ENST00000569711 CAMSAP1Q5T5Y3 1602 aa13.82□□□□□ -0.2
LINC01654-201ENST00000569711 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
LINC01654-201ENST00000569711 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
LINC01654-201ENST00000569711 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
LINC01654-201ENST00000569711 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
LINC01654-201ENST00000569711 GLI2P10070 1586 aa13.81□□□□□ -0.2
LINC01654-201ENST00000569711 BCAR3O75815 825 aa13.81□□□□□ -0.2
LINC01654-201ENST00000569711 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
LINC01654-201ENST00000569711 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
LINC01654-201ENST00000569711 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
LINC01654-201ENST00000569711 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
LINC01654-201ENST00000569711 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
LINC01654-201ENST00000569711 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
LINC01654-201ENST00000569711 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
LINC01654-201ENST00000569711 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
LINC01654-201ENST00000569711 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
LINC01654-201ENST00000569711 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
LINC01654-201ENST00000569711 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
LINC01654-201ENST00000569711 ADGRB2O60241 1585 aa13.77□□□□□ -0.21
LINC01654-201ENST00000569711 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.21
LINC01654-201ENST00000569711 TCP11L2Q8N4U5 519 aa13.77□□□□□ -0.21
LINC01654-201ENST00000569711 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
LINC01654-201ENST00000569711 MED14O60244 1454 aa13.76□□□□□ -0.21
LINC01654-201ENST00000569711 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
LINC01654-201ENST00000569711 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
LINC01654-201ENST00000569711 RGS3P49796 1198 aa13.75□□□□□ -0.21
LINC01654-201ENST00000569711 MTHFSP49914 203 aa13.75□□□□□ -0.21
LINC01654-201ENST00000569711 GGT6Q6P531 493 aa13.75□□□□□ -0.21
LINC01654-201ENST00000569711 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
LINC01654-201ENST00000569711 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
LINC01654-201ENST00000569711 IGHDP01880 384 aa13.73□□□□□ -0.21
LINC01654-201ENST00000569711 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
LINC01654-201ENST00000569711 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
LINC01654-201ENST00000569711 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
LINC01654-201ENST00000569711 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
LINC01654-201ENST00000569711 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
LINC01654-201ENST00000569711 BECN1Q14457 450 aa13.72□□□□□ -0.21
LINC01654-201ENST00000569711 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
LINC01654-201ENST00000569711 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
LINC01654-201ENST00000569711 TMEM132EQ6IEE7 984 aa13.71□□□□□ -0.21
LINC01654-201ENST00000569711 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.21
LINC01654-201ENST00000569711 IL16Q14005 1332 aa13.71□□□□□ -0.21
LINC01654-201ENST00000569711 PANK1Q8TE04 598 aa13.71□□□□□ -0.21
LINC01654-201ENST00000569711 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.22
LINC01654-201ENST00000569711 GSE1Q14687 1217 aa13.7□□□□□ -0.22
LINC01654-201ENST00000569711 UPF2Q9HAU5 1272 aaKnown RBP13.7□□□□□ -0.22
LINC01654-201ENST00000569711 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
LINC01654-201ENST00000569711 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
LINC01654-201ENST00000569711 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
LINC01654-201ENST00000569711 U2AF1L5P0DN76 240 aaPredicted RBP13.68□□□□□ -0.22
LINC01654-201ENST00000569711 TNNT2P45379 298 aaPredicted RBP13.68□□□□□ -0.22
LINC01654-201ENST00000569711 U2AF1Q01081 240 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC01654-201ENST00000569711 ZKSCAN2Q63HK3 967 aa13.68□□□□□ -0.22
LINC01654-201ENST00000569711 MVPQ14764 893 aaKnown RBP13.68□□□□□ -0.22
LINC01654-201ENST00000569711 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
LINC01654-201ENST00000569711 RICTORQ6R327 1708 aa13.67□□□□□ -0.22
LINC01654-201ENST00000569711 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
LINC01654-201ENST00000569711 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
LINC01654-201ENST00000569711 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
LINC01654-201ENST00000569711 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
LINC01654-201ENST00000569711 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
LINC01654-201ENST00000569711 USP19O94966 1318 aa13.66□□□□□ -0.22
LINC01654-201ENST00000569711 PTPRMP28827 1452 aa13.66□□□□□ -0.22
LINC01654-201ENST00000569711 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
LINC01654-201ENST00000569711 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
LINC01654-201ENST00000569711 PLEKHF1Q96S99 279 aa13.65□□□□□ -0.22
LINC01654-201ENST00000569711 IDI1Q13907 227 aa13.65□□□□□ -0.22
LINC01654-201ENST00000569711 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
LINC01654-201ENST00000569711 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.23
LINC01654-201ENST00000569711 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 HDAC1Q13547 482 aaPredicted RBP13.64□□□□□ -0.23
LINC01654-201ENST00000569711 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
LINC01654-201ENST00000569711 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
LINC01654-201ENST00000569711 RLBP1P12271 317 aa13.63□□□□□ -0.23
LINC01654-201ENST00000569711 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
LINC01654-201ENST00000569711 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
LINC01654-201ENST00000569711 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
LINC01654-201ENST00000569711 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
LINC01654-201ENST00000569711 TMPOP42166 694 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms