RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 QRICH2Q9H0J4 1663 aa32.89■■■□□ 2.86
RAB40C-212ENST00000569575 IQSEC2Q5JU85 1478 aa32.89■■■□□ 2.86
RAB40C-212ENST00000569575 DCCP43146 1447 aa32.89■■■□□ 2.86
RAB40C-212ENST00000569575 PLEKHH1Q9ULM0 1364 aa32.89■■■□□ 2.86
RAB40C-212ENST00000569575 ADGRB2O60241 1585 aa32.88■■■□□ 2.85
RAB40C-212ENST00000569575 PUS7Q96PZ0 661 aaKnown RBP32.87■■■□□ 2.85
RAB40C-212ENST00000569575 C14orf37Q86TY3 774 aa32.86■■■□□ 2.85
RAB40C-212ENST00000569575 TESK2Q96S53 571 aa32.86■■■□□ 2.85
RAB40C-212ENST00000569575 MSH6P52701 1360 aa32.85■■■□□ 2.85
RAB40C-212ENST00000569575 CDCA8Q53HL2 280 aa32.85■■■□□ 2.85
RAB40C-212ENST00000569575 EVC2Q86UK5 1308 aa32.84■■■□□ 2.85
RAB40C-212ENST00000569575 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.84■■■□□ 2.85
RAB40C-212ENST00000569575 TMF1P82094 1093 aa32.83■■■□□ 2.85
RAB40C-212ENST00000569575 XIRP1Q702N8 1843 aaKnown RBP32.82■■■□□ 2.84
RAB40C-212ENST00000569575 SAFB2Q14151 953 aaKnown RBP eCLIP32.82■■■□□ 2.84
RAB40C-212ENST00000569575 CDC42BPGQ6DT37 1551 aa32.82■■■□□ 2.84
RAB40C-212ENST00000569575 CADPS2Q86UW7 1296 aa32.81■■■□□ 2.84
RAB40C-212ENST00000569575 MINK1Q8N4C8 1332 aaPredicted RBP32.8■■■□□ 2.84
RAB40C-212ENST00000569575 WASLO00401 505 aaPredicted RBP32.8■■■□□ 2.84
RAB40C-212ENST00000569575 NALCNQ8IZF0 1738 aa32.8■■■□□ 2.84
RAB40C-212ENST00000569575 ATF3P18847 181 aa32.77■■■□□ 2.84
RAB40C-212ENST00000569575 CERKQ8TCT0 537 aa32.73■■■□□ 2.83
RAB40C-212ENST00000569575 RBM33Q96EV2 1170 aaKnown RBP32.73■■■□□ 2.83
RAB40C-212ENST00000569575 ANKARQ7Z5J8 1434 aa32.72■■■□□ 2.83
RAB40C-212ENST00000569575 CDK19Q9BWU1 502 aa32.72■■■□□ 2.83
RAB40C-212ENST00000569575 HIRIP3Q9BW71 556 aaPredicted RBP32.71■■■□□ 2.83
RAB40C-212ENST00000569575 TULP4Q9NRJ4 1543 aa32.69■■■□□ 2.82
RAB40C-212ENST00000569575 ATAD2Q6PL18 1390 aa32.69■■■□□ 2.82
RAB40C-212ENST00000569575 FMN2Q9NZ56 1722 aa32.68■■■□□ 2.82
RAB40C-212ENST00000569575 SRPK2P78362 688 aaKnown RBP32.68■■■□□ 2.82
RAB40C-212ENST00000569575 TOM1O60784 492 aa32.64■■■□□ 2.82
RAB40C-212ENST00000569575 NINLQ9Y2I6 1382 aa32.64■■■□□ 2.82
RAB40C-212ENST00000569575 CCDC61Q9Y6R9 512 aa32.64■■■□□ 2.82
RAB40C-212ENST00000569575 DISP3Q9P2K9 1392 aa32.62■■■□□ 2.81
RAB40C-212ENST00000569575 NUDT16Q96DE0 195 aaKnown RBP32.61■■■□□ 2.81
RAB40C-212ENST00000569575 MST1RQ04912 1400 aa32.6■■■□□ 2.81
RAB40C-212ENST00000569575 SLAIN2Q9P270 581 aa32.6■■■□□ 2.81
RAB40C-212ENST00000569575 CABP2Q9NPB3 220 aa32.59■■■□□ 2.81
RAB40C-212ENST00000569575 ITSN1Q15811 1721 aa32.58■■■□□ 2.81
RAB40C-212ENST00000569575 ATP7BP35670 1465 aa32.57■■■□□ 2.8
RAB40C-212ENST00000569575 C1orf167Q5SNV9 1468 aa32.57■■■□□ 2.8
RAB40C-212ENST00000569575 ZNF316A6NFI3 1004 aaPredicted RBP32.54■■■□□ 2.8
RAB40C-212ENST00000569575 USP32Q8NFA0 1604 aa32.53■■■□□ 2.8
RAB40C-212ENST00000569575 PLEKHG3A1L390 1219 aa32.53■■■□□ 2.8
RAB40C-212ENST00000569575 KIF7Q2M1P5 1343 aa32.52■■■□□ 2.8
RAB40C-212ENST00000569575 PRR36Q9H6K5 1346 aa32.52■■■□□ 2.8
RAB40C-212ENST00000569575 CCDC7Q96M83 1385 aa32.52■■■□□ 2.8
RAB40C-212ENST00000569575 C11orf95C9JLR9 678 aaPredicted RBP32.51■■■□□ 2.79
RAB40C-212ENST00000569575 TOPAZ1Q8N9V7 1692 aa32.5■■■□□ 2.79
RAB40C-212ENST00000569575 ESCO1Q5FWF5 840 aa32.49■■■□□ 2.79
RAB40C-212ENST00000569575 KIF1AQ12756 1690 aa32.49■■■□□ 2.79
RAB40C-212ENST00000569575 WASHC2AQ641Q2 1341 aa32.49■■■□□ 2.79
RAB40C-212ENST00000569575 PPIP5K1Q6PFW1 1433 aa32.48■■■□□ 2.79
RAB40C-212ENST00000569575 UBAP1LF5GYI3 381 aa32.47■■■□□ 2.79
RAB40C-212ENST00000569575 ZNF692Q9BU19 519 aaPredicted RBP32.47■■■□□ 2.79
RAB40C-212ENST00000569575 PHF8Q9UPP1 1060 aa32.47■■■□□ 2.79
RAB40C-212ENST00000569575 RGPD8O14715 1765 aaPredicted RBP32.46■■■□□ 2.79
RAB40C-212ENST00000569575 NUTM2FA1L443 756 aa32.46■■■□□ 2.79
RAB40C-212ENST00000569575 TERF2IPQ9NYB0 399 aa32.46■■■□□ 2.79
RAB40C-212ENST00000569575 CABP1Q9NZU7 370 aa32.45■■■□□ 2.79
RAB40C-212ENST00000569575 BRD4O60885 1362 aaPredicted RBP32.45■■■□□ 2.78
RAB40C-212ENST00000569575 POLR3AO14802 1390 aaPredicted RBP32.44■■■□□ 2.78
RAB40C-212ENST00000569575 TMC1Q8TDI8 760 aa32.43■■■□□ 2.78
RAB40C-212ENST00000569575 BRINP3Q76B58 766 aa32.42■■■□□ 2.78
RAB40C-212ENST00000569575 ORAI2Q96SN7 254 aa32.41■■■□□ 2.78
RAB40C-212ENST00000569575 HDGFL2Q7Z4V5 671 aaPredicted RBP32.4■■■□□ 2.78
RAB40C-212ENST00000569575 SLC12A5Q9H2X9 1139 aa32.4■■■□□ 2.78
RAB40C-212ENST00000569575 NGDNQ8NEJ9 315 aaKnown RBP32.39■■■□□ 2.78
RAB40C-212ENST00000569575 POLR3GLQ9BT43 218 aa32.39■■■□□ 2.78
RAB40C-212ENST00000569575 NPHP3Q7Z494 1330 aa32.39■■■□□ 2.78
RAB40C-212ENST00000569575 CPSF1Q10570 1443 aaKnown RBP32.38■■■□□ 2.77
RAB40C-212ENST00000569575 ANKRD36BQ8N2N9 1353 aa32.38■■■□□ 2.77
RAB40C-212ENST00000569575 ACEP12821 1306 aa32.37■■■□□ 2.77
RAB40C-212ENST00000569575 MYOM1P52179 1685 aa32.36■■■□□ 2.77
RAB40C-212ENST00000569575 PSME1Q06323 249 aa32.34■■■□□ 2.77
RAB40C-212ENST00000569575 PMFBP1Q8TBY8 1022 aa32.34■■■□□ 2.77
RAB40C-212ENST00000569575 ROBO1Q9Y6N7 1651 aa32.34■■■□□ 2.77
RAB40C-212ENST00000569575 AKAP12Q02952 1782 aa32.32■■■□□ 2.76
RAB40C-212ENST00000569575 FOXO3O43524 673 aa32.31■■■□□ 2.76
RAB40C-212ENST00000569575 CD163L1Q9NR16 1453 aa32.3■■■□□ 2.76
RAB40C-212ENST00000569575 KTN1Q86UP2 1357 aaKnown RBP32.29■■■□□ 2.76
RAB40C-212ENST00000569575 NHSL1Q5SYE7 1610 aa32.29■■■□□ 2.76
RAB40C-212ENST00000569575 USP6P35125 1406 aa32.28■■■□□ 2.76
RAB40C-212ENST00000569575 AHDC1Q5TGY3 1603 aaPredicted RBP32.28■■■□□ 2.76
RAB40C-212ENST00000569575 A0A1W2PP64 1363 aa32.28■■■□□ 2.76
RAB40C-212ENST00000569575 PIP4K2BP78356 416 aa32.27■■■□□ 2.76
RAB40C-212ENST00000569575 PANK3Q9H999 370 aa32.27■■■□□ 2.76
RAB40C-212ENST00000569575 SOS2Q07890 1332 aaPredicted RBP32.26■■■□□ 2.76
RAB40C-212ENST00000569575 EDC4Q6P2E9 1401 aaKnown RBP32.26■■■□□ 2.76
RAB40C-212ENST00000569575 MON2Q7Z3U7 1717 aa32.26■■■□□ 2.75
RAB40C-212ENST00000569575 SBNO1A3KN83 1393 aa32.25■■■□□ 2.75
RAB40C-212ENST00000569575 KRT28Q7Z3Y7 464 aa32.25■■■□□ 2.75
RAB40C-212ENST00000569575 TTC21AQ8NDW8 1320 aa32.25■■■□□ 2.75
RAB40C-212ENST00000569575 SCAF1Q9H7N4 1312 aaKnown RBP32.23■■■□□ 2.75
RAB40C-212ENST00000569575 SSH2Q76I76 1423 aa32.22■■■□□ 2.75
RAB40C-212ENST00000569575 PXDNQ92626 1479 aa32.21■■■□□ 2.75
RAB40C-212ENST00000569575 KNSTRNQ9Y448 316 aa32.2■■■□□ 2.75
RAB40C-212ENST00000569575 FBXO41Q8TF61 875 aa32.19■■■□□ 2.74
RAB40C-212ENST00000569575 LRRC59Q96AG4 307 aaKnown RBP32.19■■■□□ 2.74
RAB40C-212ENST00000569575 PER1O15534 1290 aaPredicted RBP32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms