RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TBX22Q9Y458 520 aa14.83□□□□□ -0.04
CDH3-210ENST00000569117 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
CDH3-210ENST00000569117 SLC26A8Q96RN1 970 aa14.81□□□□□ -0.04
CDH3-210ENST00000569117 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
CDH3-210ENST00000569117 PTPRUQ92729 1446 aa14.81□□□□□ -0.04
CDH3-210ENST00000569117 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
CDH3-210ENST00000569117 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
CDH3-210ENST00000569117 USP47Q96K76 1375 aa14.8□□□□□ -0.04
CDH3-210ENST00000569117 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
CDH3-210ENST00000569117 NKTRP30414 1462 aaKnown RBP14.79□□□□□ -0.04
CDH3-210ENST00000569117 EIF3AQ14152 1382 aaKnown RBP14.79□□□□□ -0.04
CDH3-210ENST00000569117 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
CDH3-210ENST00000569117 TMEM132EQ6IEE7 984 aa14.78□□□□□ -0.04
CDH3-210ENST00000569117 FAM135BQ49AJ0 1406 aa14.76□□□□□ -0.05
CDH3-210ENST00000569117 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
CDH3-210ENST00000569117 POLA2Q14181 598 aa14.76□□□□□ -0.05
CDH3-210ENST00000569117 ADGRB2O60241 1585 aa14.75□□□□□ -0.05
CDH3-210ENST00000569117 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
CDH3-210ENST00000569117 NALCNQ8IZF0 1738 aa14.73□□□□□ -0.05
CDH3-210ENST00000569117 EIF4G2P78344 907 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDH3-210ENST00000569117 ROBO2Q9HCK4 1378 aa14.73□□□□□ -0.05
CDH3-210ENST00000569117 TRAK1Q9UPV9 953 aa14.72□□□□□ -0.05
CDH3-210ENST00000569117 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
CDH3-210ENST00000569117 KCNA6P17658 529 aa14.71□□□□□ -0.05
CDH3-210ENST00000569117 SIRT1Q96EB6 747 aa14.71□□□□□ -0.05
CDH3-210ENST00000569117 STK26Q9P289 416 aa14.71□□□□□ -0.05
CDH3-210ENST00000569117 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
CDH3-210ENST00000569117 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
CDH3-210ENST00000569117 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
CDH3-210ENST00000569117 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
CDH3-210ENST00000569117 HSPA5P11021 654 aaKnown RBP14.7□□□□□ -0.06
CDH3-210ENST00000569117 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
CDH3-210ENST00000569117 PLEKHH1Q9ULM0 1364 aa14.69□□□□□ -0.06
CDH3-210ENST00000569117 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
CDH3-210ENST00000569117 TULP4Q9NRJ4 1543 aa14.68□□□□□ -0.06
CDH3-210ENST00000569117 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
CDH3-210ENST00000569117 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
CDH3-210ENST00000569117 PRAM1Q96QH2 718 aa14.68□□□□□ -0.06
CDH3-210ENST00000569117 ZNF335Q9H4Z2 1342 aaPredicted RBP14.67□□□□□ -0.06
CDH3-210ENST00000569117 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
CDH3-210ENST00000569117 TESK2Q96S53 571 aa14.66□□□□□ -0.06
CDH3-210ENST00000569117 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
CDH3-210ENST00000569117 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
CDH3-210ENST00000569117 NCOA3Q9Y6Q9 1424 aa14.66□□□□□ -0.06
CDH3-210ENST00000569117 BBXQ8WY36 941 aaPredicted RBP14.65□□□□□ -0.06
CDH3-210ENST00000569117 FMN2Q9NZ56 1722 aa14.65□□□□□ -0.06
CDH3-210ENST00000569117 WAPLQ7Z5K2 1190 aa14.64□□□□□ -0.07
CDH3-210ENST00000569117 POGKQ9P215 609 aa14.64□□□□□ -0.07
CDH3-210ENST00000569117 MYOM1P52179 1685 aa14.63□□□□□ -0.07
CDH3-210ENST00000569117 TMEM94Q12767 1356 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 DISP3Q9P2K9 1392 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 DCCP43146 1447 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
CDH3-210ENST00000569117 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
CDH3-210ENST00000569117 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDH3-210ENST00000569117 HIRIP3Q9BW71 556 aaPredicted RBP14.61□□□□□ -0.07
CDH3-210ENST00000569117 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
CDH3-210ENST00000569117 MINK1Q8N4C8 1332 aaPredicted RBP14.61□□□□□ -0.07
CDH3-210ENST00000569117 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
CDH3-210ENST00000569117 TMF1P82094 1093 aa14.59□□□□□ -0.07
CDH3-210ENST00000569117 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
CDH3-210ENST00000569117 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
CDH3-210ENST00000569117 ATP7BP35670 1465 aa14.58□□□□□ -0.08
CDH3-210ENST00000569117 EVC2Q86UK5 1308 aa14.58□□□□□ -0.08
CDH3-210ENST00000569117 CAPN15O75808 1086 aa14.57□□□□□ -0.08
CDH3-210ENST00000569117 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
CDH3-210ENST00000569117 CCDC7Q96M83 1385 aa14.57□□□□□ -0.08
CDH3-210ENST00000569117 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
CDH3-210ENST00000569117 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
CDH3-210ENST00000569117 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
CDH3-210ENST00000569117 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
CDH3-210ENST00000569117 MSH6P52701 1360 aa14.56□□□□□ -0.08
CDH3-210ENST00000569117 WASLO00401 505 aaPredicted RBP14.55□□□□□ -0.08
CDH3-210ENST00000569117 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
CDH3-210ENST00000569117 RBM33Q96EV2 1170 aaKnown RBP14.55□□□□□ -0.08
CDH3-210ENST00000569117 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
CDH3-210ENST00000569117 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
CDH3-210ENST00000569117 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
CDH3-210ENST00000569117 ATAD2Q6PL18 1390 aa14.55□□□□□ -0.08
CDH3-210ENST00000569117 C11orf95C9JLR9 678 aaPredicted RBP14.54□□□□□ -0.08
CDH3-210ENST00000569117 KIF1AQ12756 1690 aa14.53□□□□□ -0.08
CDH3-210ENST00000569117 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
CDH3-210ENST00000569117 C14orf37Q86TY3 774 aa14.53□□□□□ -0.08
CDH3-210ENST00000569117 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
CDH3-210ENST00000569117 C19orf44Q9H6X5 657 aa14.53□□□□□ -0.08
CDH3-210ENST00000569117 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
CDH3-210ENST00000569117 MST1RQ04912 1400 aa14.52□□□□□ -0.08
CDH3-210ENST00000569117 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
CDH3-210ENST00000569117 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
CDH3-210ENST00000569117 AKAP12Q02952 1782 aa14.52□□□□□ -0.09
CDH3-210ENST00000569117 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
CDH3-210ENST00000569117 PRR36Q9H6K5 1346 aa14.5□□□□□ -0.09
CDH3-210ENST00000569117 CABP2Q9NPB3 220 aa14.5□□□□□ -0.09
CDH3-210ENST00000569117 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
CDH3-210ENST00000569117 PPIP5K1Q6PFW1 1433 aa14.49□□□□□ -0.09
CDH3-210ENST00000569117 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
CDH3-210ENST00000569117 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
CDH3-210ENST00000569117 NRKQ7Z2Y5 1582 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms