RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 HRCP23327 699 aa24.41■■□□□ 1.5
CDR2-207ENST00000569045 CDC42BPGQ6DT37 1551 aa24.41■■□□□ 1.5
CDR2-207ENST00000569045 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
CDR2-207ENST00000569045 C14orf93Q9H972 538 aaKnown RBP24.4■■□□□ 1.5
CDR2-207ENST00000569045 MYOM2P54296 1465 aa24.39■■□□□ 1.5
CDR2-207ENST00000569045 YTHDC2Q9H6S0 1430 aaKnown RBP24.39■■□□□ 1.5
CDR2-207ENST00000569045 ESCO1Q5FWF5 840 aa24.39■■□□□ 1.49
CDR2-207ENST00000569045 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
CDR2-207ENST00000569045 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
CDR2-207ENST00000569045 KNDC1Q76NI1 1749 aa24.38■■□□□ 1.49
CDR2-207ENST00000569045 LAMC1P11047 1609 aa24.37■■□□□ 1.49
CDR2-207ENST00000569045 SOS2Q07890 1332 aaPredicted RBP24.36■■□□□ 1.49
CDR2-207ENST00000569045 SIRT1Q96EB6 747 aa24.36■■□□□ 1.49
CDR2-207ENST00000569045 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
CDR2-207ENST00000569045 NRXN1Q9ULB1 1477 aa24.35■■□□□ 1.49
CDR2-207ENST00000569045 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
CDR2-207ENST00000569045 C8orf37Q96NL8 207 aa24.32■■□□□ 1.48
CDR2-207ENST00000569045 AFF2P51816 1311 aa24.32■■□□□ 1.48
CDR2-207ENST00000569045 PLEKHH1Q9ULM0 1364 aa24.31■■□□□ 1.48
CDR2-207ENST00000569045 NUTM2FA1L443 756 aa24.31■■□□□ 1.48
CDR2-207ENST00000569045 RXRBP28702 533 aa24.31■■□□□ 1.48
CDR2-207ENST00000569045 STAC3Q96MF2 364 aa24.31■■□□□ 1.48
CDR2-207ENST00000569045 ADAMTS2O95450 1211 aa24.29■■□□□ 1.48
CDR2-207ENST00000569045 POGKQ9P215 609 aa24.29■■□□□ 1.48
CDR2-207ENST00000569045 FOXO3O43524 673 aa24.28■■□□□ 1.48
CDR2-207ENST00000569045 DCAF11Q8TEB1 546 aa24.28■■□□□ 1.48
CDR2-207ENST00000569045 NGLY1Q96IV0 654 aa24.28■■□□□ 1.48
CDR2-207ENST00000569045 KDM2AQ9Y2K7 1162 aa24.28■■□□□ 1.48
CDR2-207ENST00000569045 PRAM1Q96QH2 718 aa24.26■■□□□ 1.47
CDR2-207ENST00000569045 FMN2Q9NZ56 1722 aa24.25■■□□□ 1.47
CDR2-207ENST00000569045 SAFB2Q14151 953 aaKnown RBP eCLIP24.24■■□□□ 1.47
CDR2-207ENST00000569045 XPCQ01831 940 aaPredicted RBP24.23■■□□□ 1.47
CDR2-207ENST00000569045 KIF1AQ12756 1690 aa24.22■■□□□ 1.47
CDR2-207ENST00000569045 DLC1Q96QB1 1528 aa24.22■■□□□ 1.47
CDR2-207ENST00000569045 PXDNQ92626 1479 aa24.22■■□□□ 1.47
CDR2-207ENST00000569045 QTRT2Q9H974 415 aaKnown RBP24.22■■□□□ 1.47
CDR2-207ENST00000569045 COL22A1Q8NFW1 1626 aaPredicted RBP24.21■■□□□ 1.47
CDR2-207ENST00000569045 RBM6P78332 1123 aaKnown RBP24.2■■□□□ 1.46
CDR2-207ENST00000569045 TRAK1Q9UPV9 953 aa24.2■■□□□ 1.46
CDR2-207ENST00000569045 CDK12Q9NYV4 1490 aaPredicted RBP24.19■■□□□ 1.46
CDR2-207ENST00000569045 PHF8Q9UPP1 1060 aa24.19■■□□□ 1.46
CDR2-207ENST00000569045 PSME1Q06323 249 aa24.18■■□□□ 1.46
CDR2-207ENST00000569045 USP21Q9UK80 565 aa24.18■■□□□ 1.46
CDR2-207ENST00000569045 KRT28Q7Z3Y7 464 aa24.17■■□□□ 1.46
CDR2-207ENST00000569045 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
CDR2-207ENST00000569045 EIF3AQ14152 1382 aaKnown RBP24.15■■□□□ 1.46
CDR2-207ENST00000569045 TRPC5Q9UL62 973 aaPredicted RBP24.14■■□□□ 1.45
CDR2-207ENST00000569045 SPATA31A3Q5VYP0 1347 aa24.13■■□□□ 1.45
CDR2-207ENST00000569045 ANKARQ7Z5J8 1434 aa24.13■■□□□ 1.45
CDR2-207ENST00000569045 FNBP4Q8N3X1 1017 aaPredicted RBP24.13■■□□□ 1.45
CDR2-207ENST00000569045 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
CDR2-207ENST00000569045 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
CDR2-207ENST00000569045 HIRIP3Q9BW71 556 aaPredicted RBP24.11■■□□□ 1.45
CDR2-207ENST00000569045 ADGRB2O60241 1585 aa24.11■■□□□ 1.45
CDR2-207ENST00000569045 MINK1Q8N4C8 1332 aaPredicted RBP24.1■■□□□ 1.45
CDR2-207ENST00000569045 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
CDR2-207ENST00000569045 UPF1Q92900 1129 aaKnown RBP eCLIP24.08■■□□□ 1.45
CDR2-207ENST00000569045 TNS3Q68CZ2 1445 aa24.08■■□□□ 1.44
CDR2-207ENST00000569045 SBNO1A3KN83 1393 aa24.07■■□□□ 1.44
CDR2-207ENST00000569045 PMFBP1Q8TBY8 1022 aa24.07■■□□□ 1.44
CDR2-207ENST00000569045 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
CDR2-207ENST00000569045 ARHGEF10O15013 1369 aa24.06■■□□□ 1.44
CDR2-207ENST00000569045 WASLO00401 505 aaPredicted RBP24.06■■□□□ 1.44
CDR2-207ENST00000569045 RGS12O14924 1447 aa24.06■■□□□ 1.44
CDR2-207ENST00000569045 GPRASP1Q5JY77 1395 aa24.05■■□□□ 1.44
CDR2-207ENST00000569045 ATRNO75882 1429 aa24.03■■□□□ 1.44
CDR2-207ENST00000569045 TULP4Q9NRJ4 1543 aa24.03■■□□□ 1.44
CDR2-207ENST00000569045 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
CDR2-207ENST00000569045 PLEKHG5O94827 1062 aa24.01■■□□□ 1.43
CDR2-207ENST00000569045 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
CDR2-207ENST00000569045 KIAA1210Q9ULL0 1709 aa24.01■■□□□ 1.43
CDR2-207ENST00000569045 BCL9LQ86UU0 1499 aa24■■□□□ 1.43
CDR2-207ENST00000569045 ARHGEF28Q8N1W1 1705 aaKnown RBP24■■□□□ 1.43
CDR2-207ENST00000569045 UNC5CLQ8IV45 518 aa23.99■■□□□ 1.43
CDR2-207ENST00000569045 CABLES1Q8TDN4 633 aa23.98■■□□□ 1.43
CDR2-207ENST00000569045 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
CDR2-207ENST00000569045 GJD4Q96KN9 370 aaPredicted RBP23.97■■□□□ 1.43
CDR2-207ENST00000569045 PRR36Q9H6K5 1346 aa23.97■■□□□ 1.43
CDR2-207ENST00000569045 NUDT16Q96DE0 195 aaKnown RBP23.95■■□□□ 1.42
CDR2-207ENST00000569045 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.95■■□□□ 1.42
CDR2-207ENST00000569045 SLIT2O94813 1529 aa23.94■■□□□ 1.42
CDR2-207ENST00000569045 ITSN1Q15811 1721 aa23.94■■□□□ 1.42
CDR2-207ENST00000569045 PAK3O75914 559 aaPredicted RBP23.94■■□□□ 1.42
CDR2-207ENST00000569045 CDK19Q9BWU1 502 aa23.94■■□□□ 1.42
CDR2-207ENST00000569045 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
CDR2-207ENST00000569045 ATP7BP35670 1465 aa23.9■■□□□ 1.42
CDR2-207ENST00000569045 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
CDR2-207ENST00000569045 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
CDR2-207ENST00000569045 L3MBTL2Q969R5 705 aa23.89■■□□□ 1.41
CDR2-207ENST00000569045 CCDC61Q9Y6R9 512 aa23.89■■□□□ 1.41
CDR2-207ENST00000569045 CENPJQ9HC77 1338 aaPredicted RBP23.88■■□□□ 1.41
CDR2-207ENST00000569045 ABCA3Q99758 1704 aa23.88■■□□□ 1.41
CDR2-207ENST00000569045 NEUROD1Q13562 356 aa23.88■■□□□ 1.41
CDR2-207ENST00000569045 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
CDR2-207ENST00000569045 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
CDR2-207ENST00000569045 VPS72Q15906 364 aa23.87■■□□□ 1.41
CDR2-207ENST00000569045 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
CDR2-207ENST00000569045 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
CDR2-207ENST00000569045 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
CDR2-207ENST00000569045 FAM83GA6ND36 823 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms