RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
CYLD-213ENST00000568744 HRCP23327 699 aa11.67□□□□□ -0.54
CYLD-213ENST00000568744 FLIIQ13045 1269 aa11.67□□□□□ -0.54
CYLD-213ENST00000568744 MORN1Q5T089 497 aa11.67□□□□□ -0.54
CYLD-213ENST00000568744 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
CYLD-213ENST00000568744 TSC1Q92574 1164 aa11.67□□□□□ -0.54
CYLD-213ENST00000568744 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
CYLD-213ENST00000568744 MTMR2Q13614 643 aa11.66□□□□□ -0.54
CYLD-213ENST00000568744 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
CYLD-213ENST00000568744 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
CYLD-213ENST00000568744 SLC27A5Q9Y2P5 690 aa11.66□□□□□ -0.54
CYLD-213ENST00000568744 AP1G2O75843 785 aa11.65□□□□□ -0.54
CYLD-213ENST00000568744 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
CYLD-213ENST00000568744 COPS2P61201 443 aa11.63□□□□□ -0.55
CYLD-213ENST00000568744 Q3C1V9 767 aa11.63□□□□□ -0.55
CYLD-213ENST00000568744 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
CYLD-213ENST00000568744 NR1I2O75469 434 aa11.62□□□□□ -0.55
CYLD-213ENST00000568744 SPDYE5A6NIY4 337 aa11.59□□□□□ -0.55
CYLD-213ENST00000568744 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
CYLD-213ENST00000568744 MCM6Q14566 821 aa11.59□□□□□ -0.55
CYLD-213ENST00000568744 RNF19BQ6ZMZ0 732 aa11.59□□□□□ -0.55
CYLD-213ENST00000568744 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
CYLD-213ENST00000568744 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
CYLD-213ENST00000568744 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
CYLD-213ENST00000568744 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
CYLD-213ENST00000568744 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
CYLD-213ENST00000568744 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
CYLD-213ENST00000568744 CFAP99D6REC4 459 aa11.57□□□□□ -0.56
CYLD-213ENST00000568744 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
CYLD-213ENST00000568744 RETREG3Q86VR2 466 aa11.57□□□□□ -0.56
CYLD-213ENST00000568744 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
CYLD-213ENST00000568744 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
CYLD-213ENST00000568744 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
CYLD-213ENST00000568744 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
CYLD-213ENST00000568744 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
CYLD-213ENST00000568744 BRICD5Q6PL45 260 aa11.54□□□□□ -0.56
CYLD-213ENST00000568744 RAD21O60216 631 aa11.53□□□□□ -0.56
CYLD-213ENST00000568744 MTRQ99707 1265 aa11.53□□□□□ -0.56
CYLD-213ENST00000568744 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.57
CYLD-213ENST00000568744 SPSB2Q99619 263 aa11.51□□□□□ -0.57
CYLD-213ENST00000568744 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
CYLD-213ENST00000568744 TLL1O43897 1013 aa11.5□□□□□ -0.57
CYLD-213ENST00000568744 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
CYLD-213ENST00000568744 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
CYLD-213ENST00000568744 APBB1O00213 710 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
CYLD-213ENST00000568744 ZPR1O75312 459 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 LRRN4Q8WUT4 740 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 HCSTQ9UBK5 93 aa11.49□□□□□ -0.57
CYLD-213ENST00000568744 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
CYLD-213ENST00000568744 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
CYLD-213ENST00000568744 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
CYLD-213ENST00000568744 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
CYLD-213ENST00000568744 ADH1BP00325 375 aa11.46□□□□□ -0.57
CYLD-213ENST00000568744 HMX1Q9NP08 348 aaPredicted RBP11.46□□□□□ -0.57
CYLD-213ENST00000568744 GDPD2Q9HCC8 539 aa11.45□□□□□ -0.58
CYLD-213ENST00000568744 JUNDP17535 347 aa11.44□□□□□ -0.58
CYLD-213ENST00000568744 DESI1Q6ICB0 168 aa11.44□□□□□ -0.58
CYLD-213ENST00000568744 FAM160A2Q8N612 972 aaPredicted RBP11.44□□□□□ -0.58
CYLD-213ENST00000568744 PRDM9Q9NQV7 894 aa11.44□□□□□ -0.58
CYLD-213ENST00000568744 COG6Q9Y2V7 657 aa11.44□□□□□ -0.58
CYLD-213ENST00000568744 ABL2P42684 1182 aa11.43□□□□□ -0.58
CYLD-213ENST00000568744 MSS51Q4VC12 460 aa11.43□□□□□ -0.58
CYLD-213ENST00000568744 LYPD8Q6UX82 237 aa11.43□□□□□ -0.58
CYLD-213ENST00000568744 TBC1D2BQ9UPU7 963 aa11.42□□□□□ -0.58
CYLD-213ENST00000568744 A6NJR5 290 aa11.41□□□□□ -0.58
CYLD-213ENST00000568744 CTHP32929 405 aa11.41□□□□□ -0.58
CYLD-213ENST00000568744 NR6A1Q15406 480 aa11.41□□□□□ -0.58
CYLD-213ENST00000568744 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
CYLD-213ENST00000568744 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
CYLD-213ENST00000568744 SLC6A16Q9GZN6 736 aa11.41□□□□□ -0.58
CYLD-213ENST00000568744 KCNC4Q03721 635 aa11.4□□□□□ -0.58
CYLD-213ENST00000568744 EPS8L1Q8TE68 723 aa11.4□□□□□ -0.58
CYLD-213ENST00000568744 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
CYLD-213ENST00000568744 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
CYLD-213ENST00000568744 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
CYLD-213ENST00000568744 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
CYLD-213ENST00000568744 PTPRNQ16849 979 aa11.38□□□□□ -0.59
CYLD-213ENST00000568744 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
CYLD-213ENST00000568744 TRIM34Q9BYJ4 488 aa11.38□□□□□ -0.59
CYLD-213ENST00000568744 SOCS7O14512 581 aa11.37□□□□□ -0.59
CYLD-213ENST00000568744 DXOO77932 396 aaKnown RBP11.37□□□□□ -0.59
CYLD-213ENST00000568744 TRAK2O60296 914 aa11.36□□□□□ -0.59
CYLD-213ENST00000568744 S1PR4O95977 384 aa11.36□□□□□ -0.59
CYLD-213ENST00000568744 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
CYLD-213ENST00000568744 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
CYLD-213ENST00000568744 MMP16P51512 607 aa11.35□□□□□ -0.59
CYLD-213ENST00000568744 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
CYLD-213ENST00000568744 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
CYLD-213ENST00000568744 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
CYLD-213ENST00000568744 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
CYLD-213ENST00000568744 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
CYLD-213ENST00000568744 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
CYLD-213ENST00000568744 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
CYLD-213ENST00000568744 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
CYLD-213ENST00000568744 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
CYLD-213ENST00000568744 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
CYLD-213ENST00000568744 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms