RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
TCF4-241ENST00000568740 FOXD4L4Q8WXT5 416 aaPredicted RBP11.57□□□□□ -0.56
TCF4-241ENST00000568740 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
TCF4-241ENST00000568740 SLC12A5Q9H2X9 1139 aa11.57□□□□□ -0.56
TCF4-241ENST00000568740 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
TCF4-241ENST00000568740 MAPK8IP2Q13387 824 aaPredicted RBP11.56□□□□□ -0.56
TCF4-241ENST00000568740 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
TCF4-241ENST00000568740 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
TCF4-241ENST00000568740 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
TCF4-241ENST00000568740 MINK1Q8N4C8 1332 aaPredicted RBP11.56□□□□□ -0.56
TCF4-241ENST00000568740 CENPJQ9HC77 1338 aaPredicted RBP11.56□□□□□ -0.56
TCF4-241ENST00000568740 ADGRB3O60242 1522 aa11.56□□□□□ -0.56
TCF4-241ENST00000568740 WAPLQ7Z5K2 1190 aa11.56□□□□□ -0.56
TCF4-241ENST00000568740 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
TCF4-241ENST00000568740 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
TCF4-241ENST00000568740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
TCF4-241ENST00000568740 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
TCF4-241ENST00000568740 STAC3Q96MF2 364 aa11.54□□□□□ -0.56
TCF4-241ENST00000568740 PRAM1Q96QH2 718 aa11.54□□□□□ -0.56
TCF4-241ENST00000568740 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
TCF4-241ENST00000568740 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
TCF4-241ENST00000568740 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
TCF4-241ENST00000568740 ARHGAP31Q2M1Z3 1444 aa11.53□□□□□ -0.56
TCF4-241ENST00000568740 POGKQ9P215 609 aa11.53□□□□□ -0.56
TCF4-241ENST00000568740 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
TCF4-241ENST00000568740 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.57
TCF4-241ENST00000568740 MYOM2P54296 1465 aa11.51□□□□□ -0.57
TCF4-241ENST00000568740 EIF3AQ14152 1382 aaKnown RBP11.51□□□□□ -0.57
TCF4-241ENST00000568740 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
TCF4-241ENST00000568740 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
TCF4-241ENST00000568740 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
TCF4-241ENST00000568740 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
TCF4-241ENST00000568740 SLC26A8Q96RN1 970 aa11.51□□□□□ -0.57
TCF4-241ENST00000568740 PIK3C2BO00750 1634 aa11.51□□□□□ -0.57
TCF4-241ENST00000568740 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
TCF4-241ENST00000568740 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
TCF4-241ENST00000568740 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
TCF4-241ENST00000568740 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
TCF4-241ENST00000568740 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
TCF4-241ENST00000568740 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
TCF4-241ENST00000568740 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
TCF4-241ENST00000568740 POLR1AO95602 1720 aaPredicted RBP11.49□□□□□ -0.57
TCF4-241ENST00000568740 NRXN1Q9ULB1 1477 aa11.49□□□□□ -0.57
TCF4-241ENST00000568740 LTKP29376 864 aa11.49□□□□□ -0.57
TCF4-241ENST00000568740 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
TCF4-241ENST00000568740 RALBP1Q15311 655 aa11.48□□□□□ -0.57
TCF4-241ENST00000568740 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
TCF4-241ENST00000568740 TAF7LQ5H9L4 462 aa11.48□□□□□ -0.57
TCF4-241ENST00000568740 PPLO60437 1756 aa11.48□□□□□ -0.57
TCF4-241ENST00000568740 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 AGLP35573 1532 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 RIMS2Q9UQ26 1411 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 TNRQ92752 1358 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
TCF4-241ENST00000568740 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
TCF4-241ENST00000568740 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
TCF4-241ENST00000568740 IFT172Q9UG01 1749 aa11.46□□□□□ -0.57
TCF4-241ENST00000568740 FBLN1P23142 703 aa11.46□□□□□ -0.58
TCF4-241ENST00000568740 METP08581 1390 aa11.45□□□□□ -0.58
TCF4-241ENST00000568740 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
TCF4-241ENST00000568740 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
TCF4-241ENST00000568740 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
TCF4-241ENST00000568740 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
TCF4-241ENST00000568740 LAMC1P11047 1609 aa11.44□□□□□ -0.58
TCF4-241ENST00000568740 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
TCF4-241ENST00000568740 CCDC146Q8IYE0 955 aa11.44□□□□□ -0.58
TCF4-241ENST00000568740 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
TCF4-241ENST00000568740 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
TCF4-241ENST00000568740 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
TCF4-241ENST00000568740 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
TCF4-241ENST00000568740 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
TCF4-241ENST00000568740 ASXL1Q8IXJ9 1541 aa11.43□□□□□ -0.58
TCF4-241ENST00000568740 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
TCF4-241ENST00000568740 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
TCF4-241ENST00000568740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.58
TCF4-241ENST00000568740 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 USP35Q9P2H5 1018 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
TCF4-241ENST00000568740 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
TCF4-241ENST00000568740 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.58
TCF4-241ENST00000568740 PTPRMP28827 1452 aa11.4□□□□□ -0.58
TCF4-241ENST00000568740 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
TCF4-241ENST00000568740 ALKQ9UM73 1620 aa11.4□□□□□ -0.58
TCF4-241ENST00000568740 TMEM2Q9UHN6 1383 aa11.39□□□□□ -0.59
TCF4-241ENST00000568740 ZBED9Q6R2W3 1325 aa11.39□□□□□ -0.59
TCF4-241ENST00000568740 PROM2Q8N271 834 aa11.39□□□□□ -0.59
TCF4-241ENST00000568740 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
TCF4-241ENST00000568740 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
TCF4-241ENST00000568740 MFAP1P55081 439 aaKnown RBP11.38□□□□□ -0.59
TCF4-241ENST00000568740 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.38□□□□□ -0.59
TCF4-241ENST00000568740 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
TCF4-241ENST00000568740 TULP4Q9NRJ4 1543 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms