RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
KLHDC4-223ENST00000568499 USP47Q96K76 1375 aa20.96■□□□□ 0.95
KLHDC4-223ENST00000568499 PLEKHH1Q9ULM0 1364 aa20.96■□□□□ 0.95
KLHDC4-223ENST00000568499 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
KLHDC4-223ENST00000568499 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
KLHDC4-223ENST00000568499 MINK1Q8N4C8 1332 aaPredicted RBP20.93■□□□□ 0.94
KLHDC4-223ENST00000568499 TOM1O60784 492 aa20.92■□□□□ 0.94
KLHDC4-223ENST00000568499 ARHGEF28Q8N1W1 1705 aaKnown RBP20.92■□□□□ 0.94
KLHDC4-223ENST00000568499 ST20-MTHFSA0A0A6YYL1 179 aa20.91■□□□□ 0.94
KLHDC4-223ENST00000568499 DCCP43146 1447 aa20.91■□□□□ 0.94
KLHDC4-223ENST00000568499 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
KLHDC4-223ENST00000568499 EVC2Q86UK5 1308 aa20.88■□□□□ 0.93
KLHDC4-223ENST00000568499 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
KLHDC4-223ENST00000568499 WASLO00401 505 aaPredicted RBP20.87■□□□□ 0.93
KLHDC4-223ENST00000568499 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
KLHDC4-223ENST00000568499 HSPA5P11021 654 aaKnown RBP20.86■□□□□ 0.93
KLHDC4-223ENST00000568499 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 XIRP1Q702N8 1843 aaKnown RBP20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 TMF1P82094 1093 aa20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 CDK19Q9BWU1 502 aa20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 CDC42BPGQ6DT37 1551 aa20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 NALCNQ8IZF0 1738 aa20.84■□□□□ 0.93
KLHDC4-223ENST00000568499 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.93
KLHDC4-223ENST00000568499 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
KLHDC4-223ENST00000568499 ADGRB2O60241 1585 aa20.83■□□□□ 0.92
KLHDC4-223ENST00000568499 TESK2Q96S53 571 aa20.81■□□□□ 0.92
KLHDC4-223ENST00000568499 NUTM2FA1L443 756 aa20.8■□□□□ 0.92
KLHDC4-223ENST00000568499 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
KLHDC4-223ENST00000568499 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
KLHDC4-223ENST00000568499 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
KLHDC4-223ENST00000568499 PUS7Q96PZ0 661 aaKnown RBP20.78■□□□□ 0.92
KLHDC4-223ENST00000568499 MST1RQ04912 1400 aa20.78■□□□□ 0.92
KLHDC4-223ENST00000568499 ESCO1Q5FWF5 840 aa20.77■□□□□ 0.92
KLHDC4-223ENST00000568499 NUDT16Q96DE0 195 aaKnown RBP20.77■□□□□ 0.92
KLHDC4-223ENST00000568499 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
KLHDC4-223ENST00000568499 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
KLHDC4-223ENST00000568499 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
KLHDC4-223ENST00000568499 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
KLHDC4-223ENST00000568499 TULP4Q9NRJ4 1543 aa20.75■□□□□ 0.91
KLHDC4-223ENST00000568499 FMN2Q9NZ56 1722 aa20.73■□□□□ 0.91
KLHDC4-223ENST00000568499 PHF8Q9UPP1 1060 aa20.72■□□□□ 0.91
KLHDC4-223ENST00000568499 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
KLHDC4-223ENST00000568499 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
KLHDC4-223ENST00000568499 ORAI2Q96SN7 254 aa20.71■□□□□ 0.91
KLHDC4-223ENST00000568499 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
KLHDC4-223ENST00000568499 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
KLHDC4-223ENST00000568499 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
KLHDC4-223ENST00000568499 TMC1Q8TDI8 760 aa20.69■□□□□ 0.9
KLHDC4-223ENST00000568499 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
KLHDC4-223ENST00000568499 ATP7BP35670 1465 aa20.69■□□□□ 0.9
KLHDC4-223ENST00000568499 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
KLHDC4-223ENST00000568499 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
KLHDC4-223ENST00000568499 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
KLHDC4-223ENST00000568499 NINLQ9Y2I6 1382 aa20.67■□□□□ 0.9
KLHDC4-223ENST00000568499 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
KLHDC4-223ENST00000568499 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
KLHDC4-223ENST00000568499 FOXO3O43524 673 aa20.65■□□□□ 0.9
KLHDC4-223ENST00000568499 PSME1Q06323 249 aa20.65■□□□□ 0.9
KLHDC4-223ENST00000568499 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
KLHDC4-223ENST00000568499 ITSN1Q15811 1721 aa20.64■□□□□ 0.89
KLHDC4-223ENST00000568499 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
KLHDC4-223ENST00000568499 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
KLHDC4-223ENST00000568499 KIF1AQ12756 1690 aa20.63■□□□□ 0.89
KLHDC4-223ENST00000568499 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
KLHDC4-223ENST00000568499 USP32Q8NFA0 1604 aa20.63■□□□□ 0.89
KLHDC4-223ENST00000568499 ACEP12821 1306 aa20.62■□□□□ 0.89
KLHDC4-223ENST00000568499 KRT28Q7Z3Y7 464 aa20.6■□□□□ 0.89
KLHDC4-223ENST00000568499 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
KLHDC4-223ENST00000568499 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
KLHDC4-223ENST00000568499 KIF7Q2M1P5 1343 aa20.59■□□□□ 0.89
KLHDC4-223ENST00000568499 C11orf95C9JLR9 678 aaPredicted RBP20.59■□□□□ 0.89
KLHDC4-223ENST00000568499 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
KLHDC4-223ENST00000568499 TOPAZ1Q8N9V7 1692 aa20.58■□□□□ 0.88
KLHDC4-223ENST00000568499 LRRC59Q96AG4 307 aaKnown RBP20.57■□□□□ 0.88
KLHDC4-223ENST00000568499 BRD4O60885 1362 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-223ENST00000568499 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
KLHDC4-223ENST00000568499 DDX17Q92841 729 aaKnown RBP20.56■□□□□ 0.88
KLHDC4-223ENST00000568499 SOS2Q07890 1332 aaPredicted RBP20.55■□□□□ 0.88
KLHDC4-223ENST00000568499 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
KLHDC4-223ENST00000568499 XPCQ01831 940 aaPredicted RBP20.55■□□□□ 0.88
KLHDC4-223ENST00000568499 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
KLHDC4-223ENST00000568499 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
KLHDC4-223ENST00000568499 WASHC2AQ641Q2 1341 aa20.54■□□□□ 0.88
KLHDC4-223ENST00000568499 HSPA1LP34931 641 aa20.54■□□□□ 0.88
KLHDC4-223ENST00000568499 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
KLHDC4-223ENST00000568499 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
KLHDC4-223ENST00000568499 CPSF1Q10570 1443 aaKnown RBP20.53■□□□□ 0.88
KLHDC4-223ENST00000568499 SBNO1A3KN83 1393 aa20.52■□□□□ 0.88
KLHDC4-223ENST00000568499 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
KLHDC4-223ENST00000568499 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
KLHDC4-223ENST00000568499 USP6P35125 1406 aa20.51■□□□□ 0.87
KLHDC4-223ENST00000568499 PXDNQ92626 1479 aa20.5■□□□□ 0.87
KLHDC4-223ENST00000568499 PHLPP1O60346 1717 aa20.5■□□□□ 0.87
KLHDC4-223ENST00000568499 A0A1W2PP64 1363 aa20.5■□□□□ 0.87
KLHDC4-223ENST00000568499 PANK3Q9H999 370 aa20.49■□□□□ 0.87
KLHDC4-223ENST00000568499 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
KLHDC4-223ENST00000568499 TTC21AQ8NDW8 1320 aa20.49■□□□□ 0.87
KLHDC4-223ENST00000568499 ARHGEF10O15013 1369 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms