RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SMAPO00193 183 aa11.94□□□□□ -0.5
SMG1-214ENST00000568038 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
SMG1-214ENST00000568038 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
SMG1-214ENST00000568038 FAM69CQ0P6D2 419 aa11.92□□□□□ -0.5
SMG1-214ENST00000568038 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
SMG1-214ENST00000568038 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
SMG1-214ENST00000568038 KIF14Q15058 1648 aa11.91□□□□□ -0.5
SMG1-214ENST00000568038 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
SMG1-214ENST00000568038 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
SMG1-214ENST00000568038 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
SMG1-214ENST00000568038 SUPT6HQ7KZ85 1726 aaKnown RBP11.89□□□□□ -0.51
SMG1-214ENST00000568038 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
SMG1-214ENST00000568038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMG1-214ENST00000568038 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
SMG1-214ENST00000568038 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
SMG1-214ENST00000568038 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
SMG1-214ENST00000568038 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
SMG1-214ENST00000568038 TATDN2Q93075 761 aa11.87□□□□□ -0.51
SMG1-214ENST00000568038 DIP2BQ9P265 1576 aa11.87□□□□□ -0.51
SMG1-214ENST00000568038 SEMA3EO15041 775 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 NPDC1Q9NQX5 325 aaPredicted RBP11.86□□□□□ -0.51
SMG1-214ENST00000568038 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
SMG1-214ENST00000568038 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
SMG1-214ENST00000568038 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
SMG1-214ENST00000568038 ABCA9Q8IUA7 1624 aa11.85□□□□□ -0.51
SMG1-214ENST00000568038 GLI2P10070 1586 aa11.84□□□□□ -0.51
SMG1-214ENST00000568038 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
SMG1-214ENST00000568038 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
SMG1-214ENST00000568038 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
SMG1-214ENST00000568038 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
SMG1-214ENST00000568038 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
SMG1-214ENST00000568038 SAMD7Q7Z3H4 446 aa11.83□□□□□ -0.52
SMG1-214ENST00000568038 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.52
SMG1-214ENST00000568038 PLCH2O75038 1416 aa11.82□□□□□ -0.52
SMG1-214ENST00000568038 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
SMG1-214ENST00000568038 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
SMG1-214ENST00000568038 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
SMG1-214ENST00000568038 TSR3Q9UJK0 312 aaKnown RBP11.81□□□□□ -0.52
SMG1-214ENST00000568038 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
SMG1-214ENST00000568038 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
SMG1-214ENST00000568038 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
SMG1-214ENST00000568038 MAP3K4Q9Y6R4 1608 aa11.8□□□□□ -0.52
SMG1-214ENST00000568038 RNF40O75150 1001 aa11.79□□□□□ -0.52
SMG1-214ENST00000568038 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
SMG1-214ENST00000568038 PPP4CP60510 307 aa11.79□□□□□ -0.52
SMG1-214ENST00000568038 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
SMG1-214ENST00000568038 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
SMG1-214ENST00000568038 CDC42BPBQ9Y5S2 1711 aa11.79□□□□□ -0.52
SMG1-214ENST00000568038 ZNF644Q9H582 1327 aaPredicted RBP11.79□□□□□ -0.52
SMG1-214ENST00000568038 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
SMG1-214ENST00000568038 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
SMG1-214ENST00000568038 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
SMG1-214ENST00000568038 FANCAO15360 1455 aa11.78□□□□□ -0.52
SMG1-214ENST00000568038 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
SMG1-214ENST00000568038 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
SMG1-214ENST00000568038 PTGDRQ13258 359 aa11.76□□□□□ -0.53
SMG1-214ENST00000568038 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
SMG1-214ENST00000568038 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
SMG1-214ENST00000568038 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMG1-214ENST00000568038 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
SMG1-214ENST00000568038 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
SMG1-214ENST00000568038 TEX14Q8IWB6 1497 aa11.75□□□□□ -0.53
SMG1-214ENST00000568038 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
SMG1-214ENST00000568038 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
SMG1-214ENST00000568038 RRBP1Q9P2E9 1410 aaKnown RBP11.74□□□□□ -0.53
SMG1-214ENST00000568038 CAMSAP2Q08AD1 1489 aa11.74□□□□□ -0.53
SMG1-214ENST00000568038 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
SMG1-214ENST00000568038 ITGAEP38570 1179 aa11.73□□□□□ -0.53
SMG1-214ENST00000568038 NEO1Q92859 1461 aa11.73□□□□□ -0.53
SMG1-214ENST00000568038 ADGRL1O94910 1474 aa11.72□□□□□ -0.53
SMG1-214ENST00000568038 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
SMG1-214ENST00000568038 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
SMG1-214ENST00000568038 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
SMG1-214ENST00000568038 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.53
SMG1-214ENST00000568038 PLEKHH2Q8IVE3 1493 aa11.71□□□□□ -0.53
SMG1-214ENST00000568038 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.53
SMG1-214ENST00000568038 FAM161AQ3B820 660 aa11.71□□□□□ -0.53
SMG1-214ENST00000568038 RBM26Q5T8P6 1007 aaKnown RBP11.71□□□□□ -0.53
SMG1-214ENST00000568038 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
SMG1-214ENST00000568038 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
SMG1-214ENST00000568038 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
SMG1-214ENST00000568038 FCHSD2O94868 740 aa11.7□□□□□ -0.54
SMG1-214ENST00000568038 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
SMG1-214ENST00000568038 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
SMG1-214ENST00000568038 ABCC1P33527 1531 aa11.7□□□□□ -0.54
SMG1-214ENST00000568038 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 RAPGEF3O95398 923 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
SMG1-214ENST00000568038 KCNC4Q03721 635 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 EYA1Q99502 592 aa11.69□□□□□ -0.54
SMG1-214ENST00000568038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMG1-214ENST00000568038 A0A0G2JS52 829 aa11.68□□□□□ -0.54
SMG1-214ENST00000568038 RSPH4AQ5TD94 716 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms