RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
LINC01238-205ENST00000567549 AFF2P51816 1311 aa27.46■■□□□ 1.99
LINC01238-205ENST00000567549 SOS2Q07890 1332 aaPredicted RBP27.46■■□□□ 1.99
LINC01238-205ENST00000567549 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.99
LINC01238-205ENST00000567549 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
LINC01238-205ENST00000567549 STK26Q9P289 416 aa27.44■■□□□ 1.98
LINC01238-205ENST00000567549 ESCO1Q5FWF5 840 aa27.43■■□□□ 1.98
LINC01238-205ENST00000567549 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
LINC01238-205ENST00000567549 C8orf37Q96NL8 207 aa27.43■■□□□ 1.98
LINC01238-205ENST00000567549 MYOM2P54296 1465 aa27.4■■□□□ 1.98
LINC01238-205ENST00000567549 SIRT1Q96EB6 747 aa27.4■■□□□ 1.98
LINC01238-205ENST00000567549 YTHDC2Q9H6S0 1430 aaKnown RBP27.4■■□□□ 1.98
LINC01238-205ENST00000567549 DHX57Q6P158 1386 aaKnown RBP27.39■■□□□ 1.98
LINC01238-205ENST00000567549 NGLY1Q96IV0 654 aa27.39■■□□□ 1.98
LINC01238-205ENST00000567549 RAB3GAP2Q9H2M9 1393 aa27.38■■□□□ 1.97
LINC01238-205ENST00000567549 RBM6P78332 1123 aaKnown RBP27.36■■□□□ 1.97
LINC01238-205ENST00000567549 C14orf93Q9H972 538 aaKnown RBP27.36■■□□□ 1.97
LINC01238-205ENST00000567549 TMEM132EQ6IEE7 984 aa27.35■■□□□ 1.97
LINC01238-205ENST00000567549 COL22A1Q8NFW1 1626 aaPredicted RBP27.34■■□□□ 1.97
LINC01238-205ENST00000567549 KIF1AQ12756 1690 aa27.34■■□□□ 1.97
LINC01238-205ENST00000567549 NRXN1Q9ULB1 1477 aa27.34■■□□□ 1.97
LINC01238-205ENST00000567549 ADAMTS2O95450 1211 aa27.34■■□□□ 1.97
LINC01238-205ENST00000567549 WAPLQ7Z5K2 1190 aa27.34■■□□□ 1.97
LINC01238-205ENST00000567549 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
LINC01238-205ENST00000567549 QTRT2Q9H974 415 aaKnown RBP27.34■■□□□ 1.97
LINC01238-205ENST00000567549 FMN2Q9NZ56 1722 aa27.31■■□□□ 1.96
LINC01238-205ENST00000567549 HRCP23327 699 aa27.31■■□□□ 1.96
LINC01238-205ENST00000567549 FOXO3O43524 673 aa27.3■■□□□ 1.96
LINC01238-205ENST00000567549 PXDNQ92626 1479 aa27.28■■□□□ 1.96
LINC01238-205ENST00000567549 USP21Q9UK80 565 aa27.28■■□□□ 1.96
LINC01238-205ENST00000567549 TRPC5Q9UL62 973 aaPredicted RBP27.28■■□□□ 1.96
LINC01238-205ENST00000567549 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
LINC01238-205ENST00000567549 CFAP70Q5T0N1 1121 aa27.26■■□□□ 1.95
LINC01238-205ENST00000567549 UPF1Q92900 1129 aaKnown RBP eCLIP27.26■■□□□ 1.95
LINC01238-205ENST00000567549 PLEKHH1Q9ULM0 1364 aa27.25■■□□□ 1.95
LINC01238-205ENST00000567549 PSME1Q06323 249 aa27.25■■□□□ 1.95
LINC01238-205ENST00000567549 POGKQ9P215 609 aa27.25■■□□□ 1.95
LINC01238-205ENST00000567549 DLC1Q96QB1 1528 aa27.25■■□□□ 1.95
LINC01238-205ENST00000567549 FNBP4Q8N3X1 1017 aaPredicted RBP27.24■■□□□ 1.95
LINC01238-205ENST00000567549 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
LINC01238-205ENST00000567549 MARF1Q9Y4F3 1742 aaKnown RBP27.21■■□□□ 1.95
LINC01238-205ENST00000567549 PRAM1Q96QH2 718 aa27.21■■□□□ 1.95
LINC01238-205ENST00000567549 RGS12O14924 1447 aa27.21■■□□□ 1.95
LINC01238-205ENST00000567549 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
LINC01238-205ENST00000567549 PHF8Q9UPP1 1060 aa27.19■■□□□ 1.94
LINC01238-205ENST00000567549 SPATA31A3Q5VYP0 1347 aa27.18■■□□□ 1.94
LINC01238-205ENST00000567549 ANKARQ7Z5J8 1434 aa27.18■■□□□ 1.94
LINC01238-205ENST00000567549 KRT28Q7Z3Y7 464 aa27.18■■□□□ 1.94
LINC01238-205ENST00000567549 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
LINC01238-205ENST00000567549 DCAF11Q8TEB1 546 aa27.17■■□□□ 1.94
LINC01238-205ENST00000567549 ATAD2Q6PL18 1390 aa27.16■■□□□ 1.94
LINC01238-205ENST00000567549 ADGRB2O60241 1585 aa27.15■■□□□ 1.94
LINC01238-205ENST00000567549 ATRNO75882 1429 aa27.15■■□□□ 1.94
LINC01238-205ENST00000567549 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
LINC01238-205ENST00000567549 SAFB2Q14151 953 aaKnown RBP eCLIP27.14■■□□□ 1.94
LINC01238-205ENST00000567549 TNS3Q68CZ2 1445 aa27.13■■□□□ 1.93
LINC01238-205ENST00000567549 RGPD8O14715 1765 aaPredicted RBP27.12■■□□□ 1.93
LINC01238-205ENST00000567549 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
LINC01238-205ENST00000567549 KDM2AQ9Y2K7 1162 aa27.12■■□□□ 1.93
LINC01238-205ENST00000567549 ADGRB1O14514 1584 aa27.12■■□□□ 1.93
LINC01238-205ENST00000567549 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.1■■□□□ 1.93
LINC01238-205ENST00000567549 TRAK1Q9UPV9 953 aa27.1■■□□□ 1.93
LINC01238-205ENST00000567549 GPRASP1Q5JY77 1395 aa27.09■■□□□ 1.93
LINC01238-205ENST00000567549 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
LINC01238-205ENST00000567549 BCL9LQ86UU0 1499 aa27.07■■□□□ 1.92
LINC01238-205ENST00000567549 LMOD2Q6P5Q4 547 aa27.06■■□□□ 1.92
LINC01238-205ENST00000567549 UNC5CLQ8IV45 518 aa27.06■■□□□ 1.92
LINC01238-205ENST00000567549 GJD4Q96KN9 370 aaPredicted RBP27.06■■□□□ 1.92
LINC01238-205ENST00000567549 TULP4Q9NRJ4 1543 aa27.04■■□□□ 1.92
LINC01238-205ENST00000567549 CCDC125Q86Z20 511 aa27.03■■□□□ 1.92
LINC01238-205ENST00000567549 SLIT2O94813 1529 aa27.02■■□□□ 1.92
LINC01238-205ENST00000567549 MINK1Q8N4C8 1332 aaPredicted RBP27.02■■□□□ 1.92
LINC01238-205ENST00000567549 WASLO00401 505 aaPredicted RBP27.01■■□□□ 1.91
LINC01238-205ENST00000567549 PMFBP1Q8TBY8 1022 aa27■■□□□ 1.91
LINC01238-205ENST00000567549 HIRIP3Q9BW71 556 aaPredicted RBP27■■□□□ 1.91
LINC01238-205ENST00000567549 NWD2Q9ULI1 1742 aa26.99■■□□□ 1.91
LINC01238-205ENST00000567549 ITSN1Q15811 1721 aa26.99■■□□□ 1.91
LINC01238-205ENST00000567549 KIAA1210Q9ULL0 1709 aa26.98■■□□□ 1.91
LINC01238-205ENST00000567549 NGDNQ8NEJ9 315 aaKnown RBP26.97■■□□□ 1.91
LINC01238-205ENST00000567549 ARHGEF28Q8N1W1 1705 aaKnown RBP26.96■■□□□ 1.91
LINC01238-205ENST00000567549 RALGAPBQ86X10 1494 aa26.94■■□□□ 1.9
LINC01238-205ENST00000567549 ABCA3Q99758 1704 aa26.94■■□□□ 1.9
LINC01238-205ENST00000567549 PLCH1Q4KWH8 1693 aa26.93■■□□□ 1.9
LINC01238-205ENST00000567549 VPS72Q15906 364 aa26.93■■□□□ 1.9
LINC01238-205ENST00000567549 CCDC9Q9Y3X0 531 aaKnown RBP26.93■■□□□ 1.9
LINC01238-205ENST00000567549 CABLES1Q8TDN4 633 aa26.92■■□□□ 1.9
LINC01238-205ENST00000567549 TRPM3Q9HCF6 1732 aaPredicted RBP26.91■■□□□ 1.9
LINC01238-205ENST00000567549 ALS2Q96Q42 1657 aa26.89■■□□□ 1.9
LINC01238-205ENST00000567549 PLEKHG5O94827 1062 aa26.89■■□□□ 1.9
LINC01238-205ENST00000567549 PRR36Q9H6K5 1346 aa26.89■■□□□ 1.89
LINC01238-205ENST00000567549 GLI3P10071 1580 aa26.88■■□□□ 1.89
LINC01238-205ENST00000567549 PAK3O75914 559 aaPredicted RBP26.88■■□□□ 1.89
LINC01238-205ENST00000567549 NUDT16Q96DE0 195 aaKnown RBP26.87■■□□□ 1.89
LINC01238-205ENST00000567549 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
LINC01238-205ENST00000567549 SF3B2Q13435 895 aaKnown RBP26.85■■□□□ 1.89
LINC01238-205ENST00000567549 ATP7BP35670 1465 aa26.85■■□□□ 1.89
LINC01238-205ENST00000567549 ZRANB1Q9UGI0 708 aa26.84■■□□□ 1.89
LINC01238-205ENST00000567549 FAM83GA6ND36 823 aa26.83■■□□□ 1.89
LINC01238-205ENST00000567549 SEPT12Q8IYM1 358 aa26.83■■□□□ 1.89
LINC01238-205ENST00000567549 CDK19Q9BWU1 502 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms