RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 ATP10AO60312 1499 aa11.12□□□□□ -0.63
CNOT1-212ENST00000567285 MAGI2Q86UL8 1455 aa11.12□□□□□ -0.63
CNOT1-212ENST00000567285 CAMSAP1Q5T5Y3 1602 aa11.12□□□□□ -0.63
CNOT1-212ENST00000567285 SIGLEC1Q9BZZ2 1709 aa11.12□□□□□ -0.63
CNOT1-212ENST00000567285 PTPRKQ15262 1439 aa11.11□□□□□ -0.63
CNOT1-212ENST00000567285 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-212ENST00000567285 ATP10BO94823 1461 aa11.11□□□□□ -0.63
CNOT1-212ENST00000567285 ABCA8O94911 1581 aa11.11□□□□□ -0.63
CNOT1-212ENST00000567285 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
CNOT1-212ENST00000567285 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
CNOT1-212ENST00000567285 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
CNOT1-212ENST00000567285 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
CNOT1-212ENST00000567285 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
CNOT1-212ENST00000567285 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
CNOT1-212ENST00000567285 C9orf84Q5VXU9 1444 aa11.09□□□□□ -0.63
CNOT1-212ENST00000567285 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
CNOT1-212ENST00000567285 PLEKHD1A6NEE1 506 aa11.08□□□□□ -0.64
CNOT1-212ENST00000567285 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
CNOT1-212ENST00000567285 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
CNOT1-212ENST00000567285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
CNOT1-212ENST00000567285 ZMYM4Q5VZL5 1548 aa11.06□□□□□ -0.64
CNOT1-212ENST00000567285 PTGDRQ13258 359 aa11.05□□□□□ -0.64
CNOT1-212ENST00000567285 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
CNOT1-212ENST00000567285 SCAPERQ9BY12 1400 aa11.05□□□□□ -0.64
CNOT1-212ENST00000567285 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
CNOT1-212ENST00000567285 HECW1Q76N89 1606 aa11.05□□□□□ -0.64
CNOT1-212ENST00000567285 TK2O00142 265 aa11.04□□□□□ -0.64
CNOT1-212ENST00000567285 GPR37O15354 613 aa11.04□□□□□ -0.64
CNOT1-212ENST00000567285 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
CNOT1-212ENST00000567285 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
CNOT1-212ENST00000567285 BCANQ96GW7 911 aa11.03□□□□□ -0.64
CNOT1-212ENST00000567285 TSKSQ9UJT2 592 aa11.03□□□□□ -0.64
CNOT1-212ENST00000567285 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
CNOT1-212ENST00000567285 HRO43593 1189 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 PRSS12P56730 875 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 CPS1P31327 1500 aa11.02□□□□□ -0.65
CNOT1-212ENST00000567285 C3P01024 1663 aa11.01□□□□□ -0.65
CNOT1-212ENST00000567285 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
CNOT1-212ENST00000567285 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
CNOT1-212ENST00000567285 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
CNOT1-212ENST00000567285 CFAP74Q9C0B2 1584 aa11□□□□□ -0.65
CNOT1-212ENST00000567285 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
CNOT1-212ENST00000567285 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
CNOT1-212ENST00000567285 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-212ENST00000567285 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-212ENST00000567285 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
CNOT1-212ENST00000567285 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
CNOT1-212ENST00000567285 FCHSD2O94868 740 aa10.98□□□□□ -0.65
CNOT1-212ENST00000567285 FECHP22830 423 aa10.98□□□□□ -0.65
CNOT1-212ENST00000567285 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
CNOT1-212ENST00000567285 TTC13Q8NBP0 860 aa10.98□□□□□ -0.65
CNOT1-212ENST00000567285 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
CNOT1-212ENST00000567285 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
CNOT1-212ENST00000567285 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
CNOT1-212ENST00000567285 NPATQ14207 1427 aa10.96□□□□□ -0.65
CNOT1-212ENST00000567285 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
CNOT1-212ENST00000567285 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
CNOT1-212ENST00000567285 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
CNOT1-212ENST00000567285 SEPT9Q9UHD8 586 aaPredicted RBP10.95□□□□□ -0.66
CNOT1-212ENST00000567285 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
CNOT1-212ENST00000567285 SMAPO00193 183 aa10.94□□□□□ -0.66
CNOT1-212ENST00000567285 ONECUT3O60422 494 aaPredicted RBP10.93□□□□□ -0.66
CNOT1-212ENST00000567285 HIC1Q14526 733 aa10.93□□□□□ -0.66
CNOT1-212ENST00000567285 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
CNOT1-212ENST00000567285 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
CNOT1-212ENST00000567285 GNPATO15228 680 aa10.92□□□□□ -0.66
CNOT1-212ENST00000567285 RXRBP28702 533 aa10.92□□□□□ -0.66
CNOT1-212ENST00000567285 MMRN1Q13201 1228 aa10.92□□□□□ -0.66
CNOT1-212ENST00000567285 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
CNOT1-212ENST00000567285 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
CNOT1-212ENST00000567285 IFFO2Q5TF58 517 aa10.91□□□□□ -0.66
CNOT1-212ENST00000567285 ZNF772Q68DY9 489 aaPredicted RBP10.91□□□□□ -0.66
CNOT1-212ENST00000567285 NUDT18Q6ZVK8 323 aa10.9□□□□□ -0.66
CNOT1-212ENST00000567285 ZC3H15Q8WU90 426 aaKnown RBP10.9□□□□□ -0.66
CNOT1-212ENST00000567285 TATDN2Q93075 761 aa10.9□□□□□ -0.66
CNOT1-212ENST00000567285 SUPT6HQ7KZ85 1726 aaKnown RBP10.89□□□□□ -0.67
CNOT1-212ENST00000567285 ALKQ9UM73 1620 aa10.89□□□□□ -0.67
CNOT1-212ENST00000567285 MRPL50Q8N5N7 158 aaKnown RBP10.89□□□□□ -0.67
CNOT1-212ENST00000567285 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
CNOT1-212ENST00000567285 PNMA3Q9UL41 463 aa10.89□□□□□ -0.67
CNOT1-212ENST00000567285 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
CNOT1-212ENST00000567285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNOT1-212ENST00000567285 PLCH2O75038 1416 aa10.88□□□□□ -0.67
CNOT1-212ENST00000567285 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-212ENST00000567285 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
CNOT1-212ENST00000567285 ZNF518AQ6AHZ1 1483 aa10.87□□□□□ -0.67
CNOT1-212ENST00000567285 STAC3Q96MF2 364 aa10.87□□□□□ -0.67
CNOT1-212ENST00000567285 CEP170BQ9Y4F5 1589 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-212ENST00000567285 AGLP35573 1532 aa10.86□□□□□ -0.67
CNOT1-212ENST00000567285 NUTM2BA6NNL0 878 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-212ENST00000567285 NUTM2EB1AL46 878 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-212ENST00000567285 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
CNOT1-212ENST00000567285 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-212ENST00000567285 NUTM2AQ8IVF1 878 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-212ENST00000567285 EYA1Q99502 592 aa10.86□□□□□ -0.67
CNOT1-212ENST00000567285 ZMYND10O75800 440 aa10.84□□□□□ -0.67
CNOT1-212ENST00000567285 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms