RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.11	□□□□□ -0.31
FANCA-223	ENST00000567284	RGPD8	O14715	1765 aa	Predicted RBP	13.11	□□□□□ -0.31
FANCA-223	ENST00000567284	PTCH1	Q13635	1447 aa		13.11	□□□□□ -0.31
FANCA-223	ENST00000567284	FAM135B	Q49AJ0	1406 aa		13.11	□□□□□ -0.31
FANCA-223	ENST00000567284	SIRT1	Q96EB6	747 aa		13.1	□□□□□ -0.31
FANCA-223	ENST00000567284	NKTR	P30414	1462 aa	Known RBP	13.1	□□□□□ -0.31
FANCA-223	ENST00000567284	TMF1	P82094	1093 aa		13.09	□□□□□ -0.31
FANCA-223	ENST00000567284	TESK2	Q96S53	571 aa		13.09	□□□□□ -0.31
FANCA-223	ENST00000567284	DISP3	Q9P2K9	1392 aa		13.08	□□□□□ -0.31
FANCA-223	ENST00000567284	C11orf95	C9JLR9	678 aa	Predicted RBP	13.08	□□□□□ -0.32
FANCA-223	ENST00000567284	SRPK2	P78362	688 aa	Known RBP	13.07	□□□□□ -0.32
FANCA-223	ENST00000567284	TULP4	Q9NRJ4	1543 aa		13.07	□□□□□ -0.32
FANCA-223	ENST00000567284	EVC2	Q86UK5	1308 aa		13.07	□□□□□ -0.32
FANCA-223	ENST00000567284	TMEM94	Q12767	1356 aa		13.07	□□□□□ -0.32
FANCA-223	ENST00000567284	NUTM2F	A1L443	756 aa		13.06	□□□□□ -0.32
FANCA-223	ENST00000567284	CDK19	Q9BWU1	502 aa		13.06	□□□□□ -0.32
FANCA-223	ENST00000567284	CABP2	Q9NPB3	220 aa		13.06	□□□□□ -0.32
FANCA-223	ENST00000567284	FMN2	Q9NZ56	1722 aa		13.05	□□□□□ -0.32
FANCA-223	ENST00000567284	LRRC7	Q96NW7	1537 aa		13.05	□□□□□ -0.32
FANCA-223	ENST00000567284	ADGRB2	O60241	1585 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	LTBP4	Q8N2S1	1624 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	KIF7	Q2M1P5	1343 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	CCDC7	Q96M83	1385 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	SBNO2	Q9Y2G9	1366 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	ADGRL3	Q9HAR2	1447 aa		13.04	□□□□□ -0.32
FANCA-223	ENST00000567284	WASL	O00401	505 aa	Predicted RBP	13.03	□□□□□ -0.32
FANCA-223	ENST00000567284	WASHC2A	Q641Q2	1341 aa		13.03	□□□□□ -0.32
FANCA-223	ENST00000567284	ITSN1	Q15811	1721 aa		13.02	□□□□□ -0.32
FANCA-223	ENST00000567284	SLC24A1	O60721	1099 aa		13.02	□□□□□ -0.33
FANCA-223	ENST00000567284	CDCA8	Q53HL2	280 aa		13.02	□□□□□ -0.33
FANCA-223	ENST00000567284	MYOM1	P52179	1685 aa		13.02	□□□□□ -0.33
FANCA-223	ENST00000567284	TMC1	Q8TDI8	760 aa		13.01	□□□□□ -0.33
FANCA-223	ENST00000567284	MSH6	P52701	1360 aa		13.01	□□□□□ -0.33
FANCA-223	ENST00000567284	CDC42BPG	Q6DT37	1551 aa		13.01	□□□□□ -0.33
FANCA-223	ENST00000567284	USP32	Q8NFA0	1604 aa		13.01	□□□□□ -0.33
FANCA-223	ENST00000567284	ATF3	P18847	181 aa		13	□□□□□ -0.33
FANCA-223	ENST00000567284	DDX10	Q13206	875 aa	Known RBP	13	□□□□□ -0.33
FANCA-223	ENST00000567284	NUDT16	Q96DE0	195 aa	Known RBP	12.99	□□□□□ -0.33
FANCA-223	ENST00000567284	C19orf44	Q9H6X5	657 aa		12.99	□□□□□ -0.33
FANCA-223	ENST00000567284	NCOA3	Q9Y6Q9	1424 aa		12.98	□□□□□ -0.33
FANCA-223	ENST00000567284	TOPAZ1	Q8N9V7	1692 aa		12.98	□□□□□ -0.33
FANCA-223	ENST00000567284	PRR36	Q9H6K5	1346 aa		12.97	□□□□□ -0.33
FANCA-223	ENST00000567284	AKAP12	Q02952	1782 aa		12.97	□□□□□ -0.33
FANCA-223	ENST00000567284	PPIP5K1	Q6PFW1	1433 aa		12.96	□□□□□ -0.33
FANCA-223	ENST00000567284	ATAD2	Q6PL18	1390 aa		12.96	□□□□□ -0.33
FANCA-223	ENST00000567284	SLC12A5	Q9H2X9	1139 aa		12.96	□□□□□ -0.33
FANCA-223	ENST00000567284	ATP7B	P35670	1465 aa		12.96	□□□□□ -0.34
FANCA-223	ENST00000567284	CADPS2	Q86UW7	1296 aa		12.95	□□□□□ -0.34
FANCA-223	ENST00000567284	PMFBP1	Q8TBY8	1022 aa		12.95	□□□□□ -0.34
FANCA-223	ENST00000567284	CABP1	Q9NZU7	370 aa		12.95	□□□□□ -0.34
FANCA-223	ENST00000567284	CNGB1	Q14028	1251 aa	Predicted RBP	12.94	□□□□□ -0.34
FANCA-223	ENST00000567284	ESCO1	Q5FWF5	840 aa		12.94	□□□□□ -0.34
FANCA-223	ENST00000567284	CCDC61	Q9Y6R9	512 aa		12.94	□□□□□ -0.34
FANCA-223	ENST00000567284	PUS7	Q96PZ0	661 aa	Known RBP	12.93	□□□□□ -0.34
FANCA-223	ENST00000567284	PANK3	Q9H999	370 aa		12.93	□□□□□ -0.34
FANCA-223	ENST00000567284	DCC	P43146	1447 aa		12.93	□□□□□ -0.34
FANCA-223	ENST00000567284	MST1R	Q04912	1400 aa		12.93	□□□□□ -0.34
FANCA-223	ENST00000567284	ANKAR	Q7Z5J8	1434 aa		12.93	□□□□□ -0.34
FANCA-223	ENST00000567284	C1orf167	Q5SNV9	1468 aa		12.92	□□□□□ -0.34
FANCA-223	ENST00000567284	NGDN	Q8NEJ9	315 aa	Known RBP	12.92	□□□□□ -0.34
FANCA-223	ENST00000567284	CERK	Q8TCT0	537 aa		12.92	□□□□□ -0.34
FANCA-223	ENST00000567284	ORAI2	Q96SN7	254 aa		12.92	□□□□□ -0.34
FANCA-223	ENST00000567284	KIF1A	Q12756	1690 aa		12.92	□□□□□ -0.34
FANCA-223	ENST00000567284	MON2	Q7Z3U7	1717 aa		12.91	□□□□□ -0.34
FANCA-223	ENST00000567284	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.91	□□□□□ -0.34
FANCA-223	ENST00000567284	PHF8	Q9UPP1	1060 aa		12.91	□□□□□ -0.34
FANCA-223	ENST00000567284	ACE	P12821	1306 aa		12.9	□□□□□ -0.34
FANCA-223	ENST00000567284	SCAF1	Q9H7N4	1312 aa	Known RBP	12.9	□□□□□ -0.34
FANCA-223	ENST00000567284	SLAIN2	Q9P270	581 aa		12.9	□□□□□ -0.34
FANCA-223	ENST00000567284	KIF20B	Q96Q89	1820 aa		12.9	□□□□□ -0.34
FANCA-223	ENST00000567284	PIP4K2B	P78356	416 aa		12.89	□□□□□ -0.35
FANCA-223	ENST00000567284	TERF2IP	Q9NYB0	399 aa		12.89	□□□□□ -0.35
FANCA-223	ENST00000567284	NINL	Q9Y2I6	1382 aa		12.89	□□□□□ -0.35
FANCA-223	ENST00000567284	ROBO1	Q9Y6N7	1651 aa		12.89	□□□□□ -0.35
FANCA-223	ENST00000567284	PLEKHG3	A1L390	1219 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	UBAP1L	F5GYI3	381 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	XPC	Q01831	940 aa	Predicted RBP	12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	DDX17	Q92841	729 aa	Known RBP	12.88	□□□□□ -0.35
FANCA-223	ENST00000567284		A0A1W2PP64	1363 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	KTN1	Q86UP2	1357 aa	Known RBP	12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	ANKRD36B	Q8N2N9	1353 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	CD163L1	Q9NR16	1453 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	NSD3	Q9BZ95	1437 aa		12.88	□□□□□ -0.35
FANCA-223	ENST00000567284	FOXO3	O43524	673 aa		12.87	□□□□□ -0.35
FANCA-223	ENST00000567284	TOM1	O60784	492 aa		12.87	□□□□□ -0.35
FANCA-223	ENST00000567284	PSME1	Q06323	249 aa		12.87	□□□□□ -0.35
FANCA-223	ENST00000567284	DIEXF	Q68CQ4	756 aa	Known RBP	12.87	□□□□□ -0.35
FANCA-223	ENST00000567284	PAK3	O75914	559 aa	Predicted RBP	12.86	□□□□□ -0.35
FANCA-223	ENST00000567284	BRINP3	Q76B58	766 aa		12.86	□□□□□ -0.35
FANCA-223	ENST00000567284	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
FANCA-223	ENST00000567284	CARD14	Q9BXL6	1004 aa		12.86	□□□□□ -0.35
FANCA-223	ENST00000567284	IQSEC2	Q5JU85	1478 aa		12.85	□□□□□ -0.35
FANCA-223	ENST00000567284	KNSTRN	Q9Y448	316 aa		12.85	□□□□□ -0.35
FANCA-223	ENST00000567284	NRK	Q7Z2Y5	1582 aa		12.85	□□□□□ -0.35
FANCA-223	ENST00000567284	POLR3A	O14802	1390 aa	Predicted RBP	12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	PLEKHG5	O94827	1062 aa		12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	CC2D1B	Q5T0F9	858 aa	Known RBP	12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	KRT28	Q7Z3Y7	464 aa		12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	ZNF692	Q9BU19	519 aa	Predicted RBP	12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	CPSF1	Q10570	1443 aa	Known RBP	12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms