RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NRXN3Q9Y4C0 1643 aa24.06■■□□□ 1.44
CLN6-208ENST00000567060 DDX17Q92841 729 aaKnown RBP24.05■■□□□ 1.44
CLN6-208ENST00000567060 LAMC1P11047 1609 aa24.05■■□□□ 1.44
CLN6-208ENST00000567060 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
CLN6-208ENST00000567060 METP08581 1390 aa24.04■■□□□ 1.44
CLN6-208ENST00000567060 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
CLN6-208ENST00000567060 L3MBTL2Q969R5 705 aa24.03■■□□□ 1.44
CLN6-208ENST00000567060 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
CLN6-208ENST00000567060 QTRT2Q9H974 415 aaKnown RBP24.01■■□□□ 1.43
CLN6-208ENST00000567060 NHSL1Q5SYE7 1610 aa24■■□□□ 1.43
CLN6-208ENST00000567060 C8orf37Q96NL8 207 aa23.99■■□□□ 1.43
CLN6-208ENST00000567060 C14orf93Q9H972 538 aaKnown RBP23.99■■□□□ 1.43
CLN6-208ENST00000567060 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
CLN6-208ENST00000567060 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
CLN6-208ENST00000567060 KIAA1210Q9ULL0 1709 aa23.98■■□□□ 1.43
CLN6-208ENST00000567060 RBM6P78332 1123 aaKnown RBP23.97■■□□□ 1.43
CLN6-208ENST00000567060 PRAG1Q86YV5 1406 aa23.97■■□□□ 1.43
CLN6-208ENST00000567060 RGS12O14924 1447 aa23.96■■□□□ 1.43
CLN6-208ENST00000567060 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
CLN6-208ENST00000567060 ADAMTS2O95450 1211 aa23.91■■□□□ 1.42
CLN6-208ENST00000567060 NGLY1Q96IV0 654 aa23.91■■□□□ 1.42
CLN6-208ENST00000567060 C1orf167Q5SNV9 1468 aa23.89■■□□□ 1.42
CLN6-208ENST00000567060 NALCNQ8IZF0 1738 aa23.88■■□□□ 1.41
CLN6-208ENST00000567060 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
CLN6-208ENST00000567060 ORAI2Q96SN7 254 aa23.88■■□□□ 1.41
CLN6-208ENST00000567060 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
CLN6-208ENST00000567060 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
CLN6-208ENST00000567060 SOS2Q07890 1332 aaPredicted RBP23.86■■□□□ 1.41
CLN6-208ENST00000567060 TECPR2O15040 1411 aa23.86■■□□□ 1.41
CLN6-208ENST00000567060 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
CLN6-208ENST00000567060 PTCH1Q13635 1447 aa23.85■■□□□ 1.41
CLN6-208ENST00000567060 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
CLN6-208ENST00000567060 ROBO2Q9HCK4 1378 aa23.84■■□□□ 1.41
CLN6-208ENST00000567060 SIRT1Q96EB6 747 aa23.84■■□□□ 1.41
CLN6-208ENST00000567060 TRPM1Q7Z4N2 1603 aa23.84■■□□□ 1.41
CLN6-208ENST00000567060 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
CLN6-208ENST00000567060 FNBP4Q8N3X1 1017 aaPredicted RBP23.83■■□□□ 1.41
CLN6-208ENST00000567060 EP400Q96L91 3159 aa23.83■■□□□ 1.4
CLN6-208ENST00000567060 USP21Q9UK80 565 aa23.82■■□□□ 1.4
CLN6-208ENST00000567060 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
CLN6-208ENST00000567060 DLC1Q96QB1 1528 aa23.81■■□□□ 1.4
CLN6-208ENST00000567060 GPRASP1Q5JY77 1395 aa23.8■■□□□ 1.4
CLN6-208ENST00000567060 TRPC5Q9UL62 973 aaPredicted RBP23.79■■□□□ 1.4
CLN6-208ENST00000567060 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
CLN6-208ENST00000567060 TMEM132EQ6IEE7 984 aa23.78■■□□□ 1.4
CLN6-208ENST00000567060 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
CLN6-208ENST00000567060 ATAD2Q6PL18 1390 aa23.78■■□□□ 1.4
CLN6-208ENST00000567060 ATRNO75882 1429 aa23.75■■□□□ 1.39
CLN6-208ENST00000567060 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
CLN6-208ENST00000567060 STK26Q9P289 416 aa23.71■■□□□ 1.39
CLN6-208ENST00000567060 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.39
CLN6-208ENST00000567060 BCL9LQ86UU0 1499 aa23.7■■□□□ 1.38
CLN6-208ENST00000567060 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
CLN6-208ENST00000567060 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
CLN6-208ENST00000567060 ARHGEF28Q8N1W1 1705 aaKnown RBP23.68■■□□□ 1.38
CLN6-208ENST00000567060 CARD11Q9BXL7 1154 aa23.68■■□□□ 1.38
CLN6-208ENST00000567060 FOXO3O43524 673 aa23.67■■□□□ 1.38
CLN6-208ENST00000567060 TRAK1Q9UPV9 953 aa23.67■■□□□ 1.38
CLN6-208ENST00000567060 NPHP3Q7Z494 1330 aa23.66■■□□□ 1.38
CLN6-208ENST00000567060 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
CLN6-208ENST00000567060 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
CLN6-208ENST00000567060 PXDNQ92626 1479 aa23.66■■□□□ 1.38
CLN6-208ENST00000567060 POGKQ9P215 609 aa23.65■■□□□ 1.38
CLN6-208ENST00000567060 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.37
CLN6-208ENST00000567060 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
CLN6-208ENST00000567060 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
CLN6-208ENST00000567060 CCDC125Q86Z20 511 aa23.63■■□□□ 1.37
CLN6-208ENST00000567060 SLC24A1O60721 1099 aa23.62■■□□□ 1.37
CLN6-208ENST00000567060 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
CLN6-208ENST00000567060 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
CLN6-208ENST00000567060 CENPJQ9HC77 1338 aaPredicted RBP23.6■■□□□ 1.37
CLN6-208ENST00000567060 NUTM2FA1L443 756 aa23.6■■□□□ 1.37
CLN6-208ENST00000567060 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
CLN6-208ENST00000567060 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
CLN6-208ENST00000567060 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
CLN6-208ENST00000567060 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
CLN6-208ENST00000567060 UNC5CLQ8IV45 518 aa23.56■■□□□ 1.36
CLN6-208ENST00000567060 USP47Q96K76 1375 aa23.54■■□□□ 1.36
CLN6-208ENST00000567060 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
CLN6-208ENST00000567060 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
CLN6-208ENST00000567060 SLIT2O94813 1529 aa23.54■■□□□ 1.36
CLN6-208ENST00000567060 GLI3P10071 1580 aa23.52■■□□□ 1.36
CLN6-208ENST00000567060 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLN6-208ENST00000567060 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
CLN6-208ENST00000567060 EIF4G2P78344 907 aaKnown RBP eCLIP23.49■■□□□ 1.354e-7■■□□□ 14.2
CLN6-208ENST00000567060 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
CLN6-208ENST00000567060 DEFB132Q7Z7B7 95 aa23.49■■□□□ 1.35
CLN6-208ENST00000567060 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
CLN6-208ENST00000567060 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
CLN6-208ENST00000567060 ANKARQ7Z5J8 1434 aa23.49■■□□□ 1.35
CLN6-208ENST00000567060 WASLO00401 505 aaPredicted RBP23.48■■□□□ 1.35
CLN6-208ENST00000567060 MINK1Q8N4C8 1332 aaPredicted RBP23.48■■□□□ 1.35
CLN6-208ENST00000567060 EVC2Q86UK5 1308 aa23.47■■□□□ 1.35
CLN6-208ENST00000567060 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
CLN6-208ENST00000567060 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
CLN6-208ENST00000567060 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
CLN6-208ENST00000567060 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
CLN6-208ENST00000567060 CABLES1Q8TDN4 633 aa23.45■■□□□ 1.34
CLN6-208ENST00000567060 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
CLN6-208ENST00000567060 VPS72Q15906 364 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms