RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
KARS-207ENST00000566560 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
KARS-207ENST00000566560 PTCH1Q13635 1447 aa16.37■□□□□ 0.21
KARS-207ENST00000566560 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
KARS-207ENST00000566560 TECPR2O15040 1411 aa16.36■□□□□ 0.21
KARS-207ENST00000566560 KCNA6P17658 529 aa16.36■□□□□ 0.21
KARS-207ENST00000566560 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
KARS-207ENST00000566560 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
KARS-207ENST00000566560 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
KARS-207ENST00000566560 AMOTL2Q9Y2J4 779 aa16.34■□□□□ 0.21
KARS-207ENST00000566560 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
KARS-207ENST00000566560 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
KARS-207ENST00000566560 LRRC7Q96NW7 1537 aa16.32■□□□□ 0.2
KARS-207ENST00000566560 STK26Q9P289 416 aa16.32■□□□□ 0.2
KARS-207ENST00000566560 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
KARS-207ENST00000566560 ROBO2Q9HCK4 1378 aa16.31■□□□□ 0.2
KARS-207ENST00000566560 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
KARS-207ENST00000566560 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
KARS-207ENST00000566560 EIF3AQ14152 1382 aaKnown RBP16.29■□□□□ 0.2
KARS-207ENST00000566560 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
KARS-207ENST00000566560 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
KARS-207ENST00000566560 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
KARS-207ENST00000566560 TRAK1Q9UPV9 953 aa16.28■□□□□ 0.2
KARS-207ENST00000566560 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
KARS-207ENST00000566560 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
KARS-207ENST00000566560 PROSER2Q86WR7 435 aaPredicted RBP16.26■□□□□ 0.19
KARS-207ENST00000566560 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
KARS-207ENST00000566560 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
KARS-207ENST00000566560 USP47Q96K76 1375 aa16.26■□□□□ 0.19
KARS-207ENST00000566560 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
KARS-207ENST00000566560 CDC42BPGQ6DT37 1551 aa16.25■□□□□ 0.19
KARS-207ENST00000566560 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
KARS-207ENST00000566560 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
KARS-207ENST00000566560 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
KARS-207ENST00000566560 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
KARS-207ENST00000566560 WAPLQ7Z5K2 1190 aa16.23■□□□□ 0.19
KARS-207ENST00000566560 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
KARS-207ENST00000566560 POGKQ9P215 609 aa16.23■□□□□ 0.19
KARS-207ENST00000566560 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
KARS-207ENST00000566560 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
KARS-207ENST00000566560 MSH6P52701 1360 aa16.22■□□□□ 0.19
KARS-207ENST00000566560 CENPJQ9HC77 1338 aaPredicted RBP16.21■□□□□ 0.19
KARS-207ENST00000566560 DCCP43146 1447 aa16.2■□□□□ 0.18
KARS-207ENST00000566560 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
KARS-207ENST00000566560 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
KARS-207ENST00000566560 SBNO2Q9Y2G9 1366 aa16.17■□□□□ 0.18
KARS-207ENST00000566560 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
KARS-207ENST00000566560 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
KARS-207ENST00000566560 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
KARS-207ENST00000566560 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
KARS-207ENST00000566560 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
KARS-207ENST00000566560 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
KARS-207ENST00000566560 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
KARS-207ENST00000566560 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
KARS-207ENST00000566560 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
KARS-207ENST00000566560 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
KARS-207ENST00000566560 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
KARS-207ENST00000566560 MST1RQ04912 1400 aa16.12■□□□□ 0.17
KARS-207ENST00000566560 TOPAZ1Q8N9V7 1692 aa16.12■□□□□ 0.17
KARS-207ENST00000566560 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
KARS-207ENST00000566560 ATF3P18847 181 aa16.12■□□□□ 0.17
KARS-207ENST00000566560 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
KARS-207ENST00000566560 RGPD8O14715 1765 aaPredicted RBP16.11■□□□□ 0.17
KARS-207ENST00000566560 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
KARS-207ENST00000566560 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
KARS-207ENST00000566560 ATP7BP35670 1465 aa16.1■□□□□ 0.17
KARS-207ENST00000566560 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
KARS-207ENST00000566560 TESK2Q96S53 571 aa16.09■□□□□ 0.17
KARS-207ENST00000566560 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
KARS-207ENST00000566560 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
KARS-207ENST00000566560 KIF1AQ12756 1690 aa16.08■□□□□ 0.17
KARS-207ENST00000566560 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.17
KARS-207ENST00000566560 DISP3Q9P2K9 1392 aa16.08■□□□□ 0.16
KARS-207ENST00000566560 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
KARS-207ENST00000566560 PROM2Q8N271 834 aa16.07■□□□□ 0.16
KARS-207ENST00000566560 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
KARS-207ENST00000566560 TOM1O60784 492 aa16.06■□□□□ 0.16
KARS-207ENST00000566560 SRPK2P78362 688 aaKnown RBP16.06■□□□□ 0.16
KARS-207ENST00000566560 CDK19Q9BWU1 502 aa16.06■□□□□ 0.16
KARS-207ENST00000566560 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
KARS-207ENST00000566560 TMF1P82094 1093 aa16.05■□□□□ 0.16
KARS-207ENST00000566560 PRR36Q9H6K5 1346 aa16.04■□□□□ 0.16
KARS-207ENST00000566560 CABP2Q9NPB3 220 aa16.04■□□□□ 0.16
KARS-207ENST00000566560 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
KARS-207ENST00000566560 MYOM1P52179 1685 aa16.04■□□□□ 0.16
KARS-207ENST00000566560 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
KARS-207ENST00000566560 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
KARS-207ENST00000566560 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
KARS-207ENST00000566560 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.15
KARS-207ENST00000566560 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
KARS-207ENST00000566560 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
KARS-207ENST00000566560 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
KARS-207ENST00000566560 CDCA8Q53HL2 280 aa16■□□□□ 0.15
KARS-207ENST00000566560 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
KARS-207ENST00000566560 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
KARS-207ENST00000566560 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
KARS-207ENST00000566560 ORAI2Q96SN7 254 aa15.99■□□□□ 0.15
KARS-207ENST00000566560 AKAP12Q02952 1782 aa15.99■□□□□ 0.15
KARS-207ENST00000566560 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
KARS-207ENST00000566560 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms