RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 CDC42BPGQ6DT37 1551 aa33.09■■■□□ 2.89
GGA2-206ENST00000566547 LRPPRCP42704 1394 aaKnown RBP33.09■■■□□ 2.89
GGA2-206ENST00000566547 SOS2Q07890 1332 aaPredicted RBP33.08■■■□□ 2.89
GGA2-206ENST00000566547 RAB3GAP2Q9H2M9 1393 aa33.08■■■□□ 2.89
GGA2-206ENST00000566547 PLEKHH1Q9ULM0 1364 aa33.08■■■□□ 2.89
GGA2-206ENST00000566547 NUTM2FA1L443 756 aa33.07■■■□□ 2.88
GGA2-206ENST00000566547 TECPR2O15040 1411 aa33.06■■■□□ 2.88
GGA2-206ENST00000566547 RXRBP28702 533 aa33.06■■■□□ 2.88
GGA2-206ENST00000566547 KNDC1Q76NI1 1749 aa33.05■■■□□ 2.88
GGA2-206ENST00000566547 ADAMTS2O95450 1211 aa33.05■■■□□ 2.88
GGA2-206ENST00000566547 ESCO1Q5FWF5 840 aa33.05■■■□□ 2.88
GGA2-206ENST00000566547 ABCC11Q96J66 1382 aa33.02■■■□□ 2.88
GGA2-206ENST00000566547 YTHDC2Q9H6S0 1430 aaKnown RBP33.02■■■□□ 2.88
GGA2-206ENST00000566547 XPCQ01831 940 aaPredicted RBP33■■■□□ 2.87
GGA2-206ENST00000566547 CFAP70Q5T0N1 1121 aa32.98■■■□□ 2.87
GGA2-206ENST00000566547 ACIN1Q9UKV3 1341 aaKnown RBP32.98■■■□□ 2.87
GGA2-206ENST00000566547 NGLY1Q96IV0 654 aa32.97■■■□□ 2.87
GGA2-206ENST00000566547 FOXO3O43524 673 aa32.96■■■□□ 2.87
GGA2-206ENST00000566547 C14orf93Q9H972 538 aaKnown RBP32.96■■■□□ 2.87
GGA2-206ENST00000566547 QTRT2Q9H974 415 aaKnown RBP32.96■■■□□ 2.87
GGA2-206ENST00000566547 PXDNQ92626 1479 aa32.96■■■□□ 2.87
GGA2-206ENST00000566547 NRXN1Q9ULB1 1477 aa32.96■■■□□ 2.87
GGA2-206ENST00000566547 NPHP3Q7Z494 1330 aa32.95■■■□□ 2.86
GGA2-206ENST00000566547 FMN2Q9NZ56 1722 aa32.94■■■□□ 2.86
GGA2-206ENST00000566547 MYOM2P54296 1465 aa32.93■■■□□ 2.86
GGA2-206ENST00000566547 COL22A1Q8NFW1 1626 aaPredicted RBP32.93■■■□□ 2.86
GGA2-206ENST00000566547 UPF1Q92900 1129 aaKnown RBP eCLIP32.92■■■□□ 2.86
GGA2-206ENST00000566547 CDK12Q9NYV4 1490 aaPredicted RBP32.91■■■□□ 2.86
GGA2-206ENST00000566547 RGS12O14924 1447 aa32.89■■■□□ 2.86
GGA2-206ENST00000566547 DHX57Q6P158 1386 aaKnown RBP32.88■■■□□ 2.85
GGA2-206ENST00000566547 SAFB2Q14151 953 aaKnown RBP eCLIP32.88■■■□□ 2.85
GGA2-206ENST00000566547 RGPD8O14715 1765 aaPredicted RBP32.88■■■□□ 2.85
GGA2-206ENST00000566547 RBM6P78332 1123 aaKnown RBP32.87■■■□□ 2.85
GGA2-206ENST00000566547 USP21Q9UK80 565 aa32.85■■■□□ 2.85
GGA2-206ENST00000566547 SIRT1Q96EB6 747 aa32.84■■■□□ 2.85
GGA2-206ENST00000566547 PRAM1Q96QH2 718 aa32.84■■■□□ 2.85
GGA2-206ENST00000566547 KIF1AQ12756 1690 aa32.82■■■□□ 2.84
GGA2-206ENST00000566547 KDM2AQ9Y2K7 1162 aa32.81■■■□□ 2.84
GGA2-206ENST00000566547 MARF1Q9Y4F3 1742 aaKnown RBP32.8■■■□□ 2.84
GGA2-206ENST00000566547 FNBP4Q8N3X1 1017 aaPredicted RBP32.79■■■□□ 2.84
GGA2-206ENST00000566547 ADGRB1O14514 1584 aa32.77■■■□□ 2.84
GGA2-206ENST00000566547 KRT28Q7Z3Y7 464 aa32.76■■■□□ 2.83
GGA2-206ENST00000566547 DCAF11Q8TEB1 546 aa32.76■■■□□ 2.83
GGA2-206ENST00000566547 POGKQ9P215 609 aa32.76■■■□□ 2.83
GGA2-206ENST00000566547 TRPC5Q9UL62 973 aaPredicted RBP32.76■■■□□ 2.83
GGA2-206ENST00000566547 SPATA31A3Q5VYP0 1347 aa32.76■■■□□ 2.83
GGA2-206ENST00000566547 PHF8Q9UPP1 1060 aa32.75■■■□□ 2.83
GGA2-206ENST00000566547 DLC1Q96QB1 1528 aa32.74■■■□□ 2.83
GGA2-206ENST00000566547 TRAK1Q9UPV9 953 aa32.74■■■□□ 2.83
GGA2-206ENST00000566547 ATRNO75882 1429 aa32.73■■■□□ 2.83
GGA2-206ENST00000566547 USP32Q8NFA0 1604 aa32.71■■■□□ 2.83
GGA2-206ENST00000566547 PLEKHG5O94827 1062 aa32.71■■■□□ 2.83
GGA2-206ENST00000566547 HIRIP3Q9BW71 556 aaPredicted RBP32.71■■■□□ 2.83
GGA2-206ENST00000566547 BCL9LQ86UU0 1499 aa32.71■■■□□ 2.83
GGA2-206ENST00000566547 PMFBP1Q8TBY8 1022 aa32.67■■■□□ 2.82
GGA2-206ENST00000566547 HRCP23327 699 aa32.66■■■□□ 2.82
GGA2-206ENST00000566547 MINK1Q8N4C8 1332 aaPredicted RBP32.66■■■□□ 2.82
GGA2-206ENST00000566547 TNS3Q68CZ2 1445 aa32.66■■■□□ 2.82
GGA2-206ENST00000566547 ADGRB2O60241 1585 aa32.66■■■□□ 2.82
GGA2-206ENST00000566547 CABLES1Q8TDN4 633 aa32.65■■■□□ 2.82
GGA2-206ENST00000566547 EP400Q96L91 3159 aa32.64■■■□□ 2.82
GGA2-206ENST00000566547 PSME1Q06323 249 aa32.63■■■□□ 2.81
GGA2-206ENST00000566547 LMOD2Q6P5Q4 547 aa32.63■■■□□ 2.81
GGA2-206ENST00000566547 ANKARQ7Z5J8 1434 aa32.6■■■□□ 2.81
GGA2-206ENST00000566547 HAP1P54257 671 aaPredicted RBP32.59■■■□□ 2.81
GGA2-206ENST00000566547 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.59■■■□□ 2.81
GGA2-206ENST00000566547 PRR36Q9H6K5 1346 aa32.58■■■□□ 2.81
GGA2-206ENST00000566547 SLIT2O94813 1529 aa32.58■■■□□ 2.81
GGA2-206ENST00000566547 GJD4Q96KN9 370 aaPredicted RBP32.58■■■□□ 2.81
GGA2-206ENST00000566547 SBNO1A3KN83 1393 aa32.58■■■□□ 2.81
GGA2-206ENST00000566547 ATAD2Q6PL18 1390 aa32.58■■■□□ 2.81
GGA2-206ENST00000566547 ABCA3Q99758 1704 aa32.57■■■□□ 2.81
GGA2-206ENST00000566547 UNC5CLQ8IV45 518 aa32.56■■■□□ 2.8
GGA2-206ENST00000566547 ARHGEF28Q8N1W1 1705 aaKnown RBP32.56■■■□□ 2.8
GGA2-206ENST00000566547 GLI3P10071 1580 aa32.53■■■□□ 2.8
GGA2-206ENST00000566547 TULP4Q9NRJ4 1543 aa32.53■■■□□ 2.8
GGA2-206ENST00000566547 WASLO00401 505 aaPredicted RBP32.53■■■□□ 2.8
GGA2-206ENST00000566547 TRPM3Q9HCF6 1732 aaPredicted RBP32.53■■■□□ 2.8
GGA2-206ENST00000566547 STAC3Q96MF2 364 aa32.52■■■□□ 2.8
GGA2-206ENST00000566547 RALGAPBQ86X10 1494 aa32.52■■■□□ 2.8
GGA2-206ENST00000566547 PLCH1Q4KWH8 1693 aa32.52■■■□□ 2.8
GGA2-206ENST00000566547 ARHGEF10O15013 1369 aa32.51■■■□□ 2.79
GGA2-206ENST00000566547 EIF3AQ14152 1382 aaKnown RBP32.47■■■□□ 2.79
GGA2-206ENST00000566547 ALS2Q96Q42 1657 aa32.46■■■□□ 2.79
GGA2-206ENST00000566547 GPRASP1Q5JY77 1395 aa32.45■■■□□ 2.79
GGA2-206ENST00000566547 NWD2Q9ULI1 1742 aa32.44■■■□□ 2.78
GGA2-206ENST00000566547 BRWD3Q6RI45 1802 aa32.44■■■□□ 2.78
GGA2-206ENST00000566547 FAM83GA6ND36 823 aa32.43■■■□□ 2.78
GGA2-206ENST00000566547 NGDNQ8NEJ9 315 aaKnown RBP32.43■■■□□ 2.78
GGA2-206ENST00000566547 CCDC9Q9Y3X0 531 aaKnown RBP32.41■■■□□ 2.78
GGA2-206ENST00000566547 ATP7BP35670 1465 aa32.41■■■□□ 2.78
GGA2-206ENST00000566547 PAK3O75914 559 aaPredicted RBP32.4■■■□□ 2.78
GGA2-206ENST00000566547 VPS72Q15906 364 aa32.4■■■□□ 2.78
GGA2-206ENST00000566547 NBPF1Q3BBV0 1214 aa32.4■■■□□ 2.78
GGA2-206ENST00000566547 NUDT16Q96DE0 195 aaKnown RBP32.4■■■□□ 2.78
GGA2-206ENST00000566547 ITSN1Q15811 1721 aa32.4■■■□□ 2.78
GGA2-206ENST00000566547 SRCAPQ6ZRS2 3230 aa32.39■■■□□ 2.78
GGA2-206ENST00000566547 KIAA1210Q9ULL0 1709 aa32.39■■■□□ 2.78
GGA2-206ENST00000566547 CDK19Q9BWU1 502 aa32.37■■■□□ 2.77
GGA2-206ENST00000566547 SEPT12Q8IYM1 358 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms