RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
LINC00562-201ENST00000566385 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
LINC00562-201ENST00000566385 SRPK2P78362 688 aaKnown RBP15.4■□□□□ 0.06
LINC00562-201ENST00000566385 ABCC11Q96J66 1382 aa15.4■□□□□ 0.06
LINC00562-201ENST00000566385 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
LINC00562-201ENST00000566385 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
LINC00562-201ENST00000566385 SLIT1O75093 1534 aa15.39■□□□□ 0.05
LINC00562-201ENST00000566385 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
LINC00562-201ENST00000566385 THEMISQ8N1K5 641 aaPredicted RBP15.38■□□□□ 0.05
LINC00562-201ENST00000566385 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
LINC00562-201ENST00000566385 EID1Q9Y6B2 187 aa15.38■□□□□ 0.05
LINC00562-201ENST00000566385 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
LINC00562-201ENST00000566385 DLC1Q96QB1 1528 aa15.37■□□□□ 0.05
LINC00562-201ENST00000566385 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
LINC00562-201ENST00000566385 NSD3Q9BZ95 1437 aa15.36■□□□□ 0.05
LINC00562-201ENST00000566385 PPP2R1AP30153 589 aa15.36■□□□□ 0.05
LINC00562-201ENST00000566385 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
LINC00562-201ENST00000566385 MED14O60244 1454 aa15.35■□□□□ 0.05
LINC00562-201ENST00000566385 ROBO2Q9HCK4 1378 aa15.34■□□□□ 0.05
LINC00562-201ENST00000566385 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
LINC00562-201ENST00000566385 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
LINC00562-201ENST00000566385 TECPR2O15040 1411 aa15.33■□□□□ 0.04
LINC00562-201ENST00000566385 A0A1W2PP64 1363 aa15.32■□□□□ 0.04
LINC00562-201ENST00000566385 ANKRD36BQ8N2N9 1353 aa15.32■□□□□ 0.04
LINC00562-201ENST00000566385 KNDC1Q76NI1 1749 aa15.32■□□□□ 0.04
LINC00562-201ENST00000566385 CABP1Q9NZU7 370 aa15.32■□□□□ 0.04
LINC00562-201ENST00000566385 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
LINC00562-201ENST00000566385 NCKAP5LQ9HCH0 1330 aa15.31■□□□□ 0.04
LINC00562-201ENST00000566385 CPS1P31327 1500 aa15.31■□□□□ 0.04
LINC00562-201ENST00000566385 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
LINC00562-201ENST00000566385 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
LINC00562-201ENST00000566385 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
LINC00562-201ENST00000566385 SETD1BQ9UPS6 1966 aaKnown RBP15.3■□□□□ 0.04
LINC00562-201ENST00000566385 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
LINC00562-201ENST00000566385 AMOTL2Q9Y2J4 779 aa15.29■□□□□ 0.04
LINC00562-201ENST00000566385 TBX22Q9Y458 520 aa15.29■□□□□ 0.04
LINC00562-201ENST00000566385 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
LINC00562-201ENST00000566385 SIRT1Q96EB6 747 aa15.28■□□□□ 0.04
LINC00562-201ENST00000566385 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.28■□□□□ 0.04
LINC00562-201ENST00000566385 ZNF142P52746 1687 aaPredicted RBP15.27■□□□□ 0.04
LINC00562-201ENST00000566385 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.03
LINC00562-201ENST00000566385 NUTM2FA1L443 756 aa15.26■□□□□ 0.03
LINC00562-201ENST00000566385 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
LINC00562-201ENST00000566385 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
LINC00562-201ENST00000566385 NINLQ9Y2I6 1382 aa15.26■□□□□ 0.03
LINC00562-201ENST00000566385 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
LINC00562-201ENST00000566385 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
LINC00562-201ENST00000566385 ANKLE2Q86XL3 938 aa15.25■□□□□ 0.03
LINC00562-201ENST00000566385 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
LINC00562-201ENST00000566385 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
LINC00562-201ENST00000566385 PRR36Q9H6K5 1346 aa15.25■□□□□ 0.03
LINC00562-201ENST00000566385 NUDT16Q96DE0 195 aaKnown RBP15.24■□□□□ 0.03
LINC00562-201ENST00000566385 FYB1O15117 783 aa15.23■□□□□ 0.03
LINC00562-201ENST00000566385 KCNA6P17658 529 aa15.23■□□□□ 0.03
LINC00562-201ENST00000566385 PPIP5K1Q6PFW1 1433 aa15.23■□□□□ 0.03
LINC00562-201ENST00000566385 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
LINC00562-201ENST00000566385 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
LINC00562-201ENST00000566385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC00562-201ENST00000566385 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.03
LINC00562-201ENST00000566385 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.02
LINC00562-201ENST00000566385 ATP7BP35670 1465 aa15.21■□□□□ 0.02
LINC00562-201ENST00000566385 XRN1Q8IZH2 1706 aaKnown RBP15.2■□□□□ 0.02
LINC00562-201ENST00000566385 MTHFSP49914 203 aa15.2■□□□□ 0.02
LINC00562-201ENST00000566385 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
LINC00562-201ENST00000566385 CPSF1Q10570 1443 aaKnown RBP15.19■□□□□ 0.02
LINC00562-201ENST00000566385 PTCH1Q13635 1447 aa15.19■□□□□ 0.02
LINC00562-201ENST00000566385 FBLN1P23142 703 aa15.19■□□□□ 0.02
LINC00562-201ENST00000566385 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC00562-201ENST00000566385 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
LINC00562-201ENST00000566385 ADGRB2O60241 1585 aa15.18■□□□□ 0.02
LINC00562-201ENST00000566385 NSD2O96028 1365 aa15.18■□□□□ 0.02
LINC00562-201ENST00000566385 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
LINC00562-201ENST00000566385 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
LINC00562-201ENST00000566385 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
LINC00562-201ENST00000566385 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
LINC00562-201ENST00000566385 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
LINC00562-201ENST00000566385 CDC42BPGQ6DT37 1551 aa15.15■□□□□ 0.02
LINC00562-201ENST00000566385 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
LINC00562-201ENST00000566385 NME9Q86XW9 330 aa15.15■□□□□ 0.02
LINC00562-201ENST00000566385 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
LINC00562-201ENST00000566385 KIF20BQ96Q89 1820 aa15.14■□□□□ 0.01
LINC00562-201ENST00000566385 SHPRHQ149N8 1683 aa15.14■□□□□ 0.01
LINC00562-201ENST00000566385 ANKRD26Q9UPS8 1709 aa15.14■□□□□ 0.01
LINC00562-201ENST00000566385 NPHP4O75161 1426 aaPredicted RBP15.14■□□□□ 0.01
LINC00562-201ENST00000566385 FKBP8Q14318 412 aa15.14■□□□□ 0.01
LINC00562-201ENST00000566385 PMFBP1Q8TBY8 1022 aa15.14■□□□□ 0.01
LINC00562-201ENST00000566385 ACEP12821 1306 aa15.13■□□□□ 0.01
LINC00562-201ENST00000566385 KDM4FA0A1W2PPD8 638 aa15.13■□□□□ 0.01
LINC00562-201ENST00000566385 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
LINC00562-201ENST00000566385 TOPAZ1Q8N9V7 1692 aa15.13■□□□□ 0.01
LINC00562-201ENST00000566385 AKAP12Q02952 1782 aa15.13■□□□□ 0.01
LINC00562-201ENST00000566385 MON2Q7Z3U7 1717 aa15.12■□□□□ 0.01
LINC00562-201ENST00000566385 INSRP06213 1382 aa15.12■□□□□ 0.01
LINC00562-201ENST00000566385 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
LINC00562-201ENST00000566385 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
LINC00562-201ENST00000566385 HSPA2P54652 639 aa15.11■□□□□ 0.01
LINC00562-201ENST00000566385 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
LINC00562-201ENST00000566385 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
LINC00562-201ENST00000566385 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
LINC00562-201ENST00000566385 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms