RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
LINC00563-201ENST00000566370 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
LINC00563-201ENST00000566370 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
LINC00563-201ENST00000566370 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
LINC00563-201ENST00000566370 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
LINC00563-201ENST00000566370 POGKQ9P215 609 aa17.62■□□□□ 0.41
LINC00563-201ENST00000566370 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
LINC00563-201ENST00000566370 GOLGA2Q08379 1002 aa17.61■□□□□ 0.41
LINC00563-201ENST00000566370 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
LINC00563-201ENST00000566370 CARD14Q9BXL6 1004 aa17.61■□□□□ 0.41
LINC00563-201ENST00000566370 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
LINC00563-201ENST00000566370 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
LINC00563-201ENST00000566370 DLC1Q96QB1 1528 aa17.59■□□□□ 0.41
LINC00563-201ENST00000566370 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.41
LINC00563-201ENST00000566370 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.41
LINC00563-201ENST00000566370 MYT1Q01538 1121 aa17.58■□□□□ 0.41
LINC00563-201ENST00000566370 SLC12A5Q9H2X9 1139 aa17.58■□□□□ 0.41
LINC00563-201ENST00000566370 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
LINC00563-201ENST00000566370 RBM19Q9Y4C8 960 aaKnown RBP17.57■□□□□ 0.4
LINC00563-201ENST00000566370 RIMS2Q9UQ26 1411 aa17.57■□□□□ 0.4
LINC00563-201ENST00000566370 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
LINC00563-201ENST00000566370 PTPRMP28827 1452 aa17.57■□□□□ 0.4
LINC00563-201ENST00000566370 STK26Q9P289 416 aa17.56■□□□□ 0.4
LINC00563-201ENST00000566370 HDGFL2Q7Z4V5 671 aaPredicted RBP17.55■□□□□ 0.4
LINC00563-201ENST00000566370 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
LINC00563-201ENST00000566370 MLECQ14165 292 aa17.54■□□□□ 0.4
LINC00563-201ENST00000566370 ANKRD26Q9UPS8 1709 aa17.53■□□□□ 0.4
LINC00563-201ENST00000566370 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
LINC00563-201ENST00000566370 ZNF521Q96K83 1311 aa17.52■□□□□ 0.4
LINC00563-201ENST00000566370 E9PSI1 815 aa17.52■□□□□ 0.4
LINC00563-201ENST00000566370 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
LINC00563-201ENST00000566370 MED14O60244 1454 aa17.52■□□□□ 0.39
LINC00563-201ENST00000566370 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
LINC00563-201ENST00000566370 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
LINC00563-201ENST00000566370 ZMYM3Q14202 1370 aa17.51■□□□□ 0.39
LINC00563-201ENST00000566370 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00563-201ENST00000566370 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
LINC00563-201ENST00000566370 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
LINC00563-201ENST00000566370 SHPRHQ149N8 1683 aa17.5■□□□□ 0.39
LINC00563-201ENST00000566370 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
LINC00563-201ENST00000566370 APAF1O14727 1248 aa17.49■□□□□ 0.39
LINC00563-201ENST00000566370 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
LINC00563-201ENST00000566370 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
LINC00563-201ENST00000566370 TNRQ92752 1358 aa17.49■□□□□ 0.39
LINC00563-201ENST00000566370 NKTRP30414 1462 aaKnown RBP17.49■□□□□ 0.39
LINC00563-201ENST00000566370 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
LINC00563-201ENST00000566370 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
LINC00563-201ENST00000566370 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
LINC00563-201ENST00000566370 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
LINC00563-201ENST00000566370 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
LINC00563-201ENST00000566370 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
LINC00563-201ENST00000566370 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
LINC00563-201ENST00000566370 ATP7BP35670 1465 aa17.46■□□□□ 0.39
LINC00563-201ENST00000566370 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.39
LINC00563-201ENST00000566370 TNNT2P45379 298 aaPredicted RBP17.46■□□□□ 0.39
LINC00563-201ENST00000566370 MTHFSP49914 203 aa17.46■□□□□ 0.39
LINC00563-201ENST00000566370 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
LINC00563-201ENST00000566370 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
LINC00563-201ENST00000566370 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
LINC00563-201ENST00000566370 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
LINC00563-201ENST00000566370 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
LINC00563-201ENST00000566370 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
LINC00563-201ENST00000566370 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
LINC00563-201ENST00000566370 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
LINC00563-201ENST00000566370 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
LINC00563-201ENST00000566370 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
LINC00563-201ENST00000566370 CPS1P31327 1500 aa17.4■□□□□ 0.38
LINC00563-201ENST00000566370 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
LINC00563-201ENST00000566370 TECPR2O15040 1411 aa17.39■□□□□ 0.37
LINC00563-201ENST00000566370 NEFMP07197 916 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
LINC00563-201ENST00000566370 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00563-201ENST00000566370 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 CRBNQ96SW2 442 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 MAPK8IP3Q9UPT6 1336 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
LINC00563-201ENST00000566370 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
LINC00563-201ENST00000566370 ADGRB2O60241 1585 aa17.36■□□□□ 0.37
LINC00563-201ENST00000566370 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
LINC00563-201ENST00000566370 PLIN1O60240 522 aa17.36■□□□□ 0.37
LINC00563-201ENST00000566370 MS4A1P11836 297 aa17.36■□□□□ 0.37
LINC00563-201ENST00000566370 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
LINC00563-201ENST00000566370 GGNBP2Q9H3C7 697 aa17.36■□□□□ 0.37
LINC00563-201ENST00000566370 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
LINC00563-201ENST00000566370 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
LINC00563-201ENST00000566370 FYB1O15117 783 aa17.35■□□□□ 0.37
LINC00563-201ENST00000566370 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
LINC00563-201ENST00000566370 AAMPQ13685 434 aa17.34■□□□□ 0.37
LINC00563-201ENST00000566370 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
LINC00563-201ENST00000566370 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
LINC00563-201ENST00000566370 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.37
LINC00563-201ENST00000566370 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.36
LINC00563-201ENST00000566370 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
LINC00563-201ENST00000566370 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
LINC00563-201ENST00000566370 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.36
LINC00563-201ENST00000566370 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
LINC00563-201ENST00000566370 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms