RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
LSM3P5-201ENST00000566307 KNDC1Q76NI1 1749 aa12.13□□□□□ -0.47
LSM3P5-201ENST00000566307 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
LSM3P5-201ENST00000566307 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
LSM3P5-201ENST00000566307 TECPR2O15040 1411 aa12.12□□□□□ -0.47
LSM3P5-201ENST00000566307 PLEKHG1Q9ULL1 1385 aa12.12□□□□□ -0.47
LSM3P5-201ENST00000566307 NINLQ9Y2I6 1382 aa12.12□□□□□ -0.47
LSM3P5-201ENST00000566307 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
LSM3P5-201ENST00000566307 POLR3GLQ9BT43 218 aa12.11□□□□□ -0.47
LSM3P5-201ENST00000566307 MED14O60244 1454 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 TMEM132EQ6IEE7 984 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 PANK3Q9H999 370 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
LSM3P5-201ENST00000566307 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 INSRP06213 1382 aa12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 USP32Q8NFA0 1604 aa12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 CPS1P31327 1500 aa12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
LSM3P5-201ENST00000566307 RIMS1Q86UR5 1692 aaKnown RBP12.08□□□□□ -0.48
LSM3P5-201ENST00000566307 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
LSM3P5-201ENST00000566307 ADAMTS13Q76LX8 1427 aa12.08□□□□□ -0.48
LSM3P5-201ENST00000566307 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
LSM3P5-201ENST00000566307 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
LSM3P5-201ENST00000566307 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
LSM3P5-201ENST00000566307 ATAD2Q6PL18 1390 aa12.06□□□□□ -0.48
LSM3P5-201ENST00000566307 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
LSM3P5-201ENST00000566307 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
LSM3P5-201ENST00000566307 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
LSM3P5-201ENST00000566307 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
LSM3P5-201ENST00000566307 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
LSM3P5-201ENST00000566307 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
LSM3P5-201ENST00000566307 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
LSM3P5-201ENST00000566307 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
LSM3P5-201ENST00000566307 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
LSM3P5-201ENST00000566307 NSD2O96028 1365 aa12.03□□□□□ -0.48
LSM3P5-201ENST00000566307 METP08581 1390 aa12.03□□□□□ -0.48
LSM3P5-201ENST00000566307 ANKRD36BQ8N2N9 1353 aa12.03□□□□□ -0.48
LSM3P5-201ENST00000566307 CCDC184Q52MB2 194 aa12.02□□□□□ -0.49
LSM3P5-201ENST00000566307 POTEHQ6S545 545 aa12.02□□□□□ -0.49
LSM3P5-201ENST00000566307 PRAM1Q96QH2 718 aa12.02□□□□□ -0.49
LSM3P5-201ENST00000566307 LTKP29376 864 aa12.01□□□□□ -0.49
LSM3P5-201ENST00000566307 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
LSM3P5-201ENST00000566307 PNISRQ8TF01 805 aaKnown RBP12.01□□□□□ -0.49
LSM3P5-201ENST00000566307 POGKQ9P215 609 aa12.01□□□□□ -0.49
LSM3P5-201ENST00000566307 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
LSM3P5-201ENST00000566307 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
LSM3P5-201ENST00000566307 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
LSM3P5-201ENST00000566307 STK26Q9P289 416 aa11.99□□□□□ -0.49
LSM3P5-201ENST00000566307 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
LSM3P5-201ENST00000566307 ATP7BP35670 1465 aa11.98□□□□□ -0.49
LSM3P5-201ENST00000566307 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
LSM3P5-201ENST00000566307 NSD3Q9BZ95 1437 aa11.96□□□□□ -0.49
LSM3P5-201ENST00000566307 PLEKHH1Q9ULM0 1364 aa11.96□□□□□ -0.49
LSM3P5-201ENST00000566307 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
LSM3P5-201ENST00000566307 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
LSM3P5-201ENST00000566307 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
LSM3P5-201ENST00000566307 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 CDK19Q9BWU1 502 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
LSM3P5-201ENST00000566307 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 SRPK2P78362 688 aaKnown RBP11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
LSM3P5-201ENST00000566307 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
LSM3P5-201ENST00000566307 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
LSM3P5-201ENST00000566307 ANKLE2Q86XL3 938 aa11.93□□□□□ -0.5
LSM3P5-201ENST00000566307 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
LSM3P5-201ENST00000566307 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
LSM3P5-201ENST00000566307 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
LSM3P5-201ENST00000566307 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
LSM3P5-201ENST00000566307 TOPAZ1Q8N9V7 1692 aa11.92□□□□□ -0.5
LSM3P5-201ENST00000566307 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSM3P5-201ENST00000566307 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
LSM3P5-201ENST00000566307 BCANQ96GW7 911 aa11.91□□□□□ -0.5
LSM3P5-201ENST00000566307 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
LSM3P5-201ENST00000566307 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
LSM3P5-201ENST00000566307 MON2Q7Z3U7 1717 aa11.89□□□□□ -0.51
LSM3P5-201ENST00000566307 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
LSM3P5-201ENST00000566307 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
LSM3P5-201ENST00000566307 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
LSM3P5-201ENST00000566307 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
LSM3P5-201ENST00000566307 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms