RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CENPJQ9HC77 1338 aaPredicted RBP20.85■□□□□ 0.93
SPG7-213ENST00000566221 HSPA1LP34931 641 aa20.85■□□□□ 0.93
SPG7-213ENST00000566221 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
SPG7-213ENST00000566221 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
SPG7-213ENST00000566221 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
SPG7-213ENST00000566221 SBNO2Q9Y2G9 1366 aa20.84■□□□□ 0.93
SPG7-213ENST00000566221 POGKQ9P215 609 aa20.83■□□□□ 0.93
SPG7-213ENST00000566221 PLEKHH1Q9ULM0 1364 aa20.83■□□□□ 0.92
SPG7-213ENST00000566221 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
SPG7-213ENST00000566221 LRRC7Q96NW7 1537 aa20.82■□□□□ 0.92
SPG7-213ENST00000566221 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
SPG7-213ENST00000566221 CDC42BPGQ6DT37 1551 aa20.8■□□□□ 0.92
SPG7-213ENST00000566221 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
SPG7-213ENST00000566221 ST20-MTHFSA0A0A6YYL1 179 aa20.8■□□□□ 0.92
SPG7-213ENST00000566221 ADGRL3Q9HAR2 1447 aa20.79■□□□□ 0.92
SPG7-213ENST00000566221 WAPLQ7Z5K2 1190 aa20.79■□□□□ 0.92
SPG7-213ENST00000566221 PROSER2Q86WR7 435 aaPredicted RBP20.79■□□□□ 0.92
SPG7-213ENST00000566221 TMEM94Q12767 1356 aa20.77■□□□□ 0.92
SPG7-213ENST00000566221 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
SPG7-213ENST00000566221 FMN2Q9NZ56 1722 aa20.77■□□□□ 0.92
SPG7-213ENST00000566221 TULP4Q9NRJ4 1543 aa20.77■□□□□ 0.92
SPG7-213ENST00000566221 TOM1O60784 492 aa20.76■□□□□ 0.91
SPG7-213ENST00000566221 SLC24A1O60721 1099 aa20.75■□□□□ 0.91
SPG7-213ENST00000566221 TESK2Q96S53 571 aa20.75■□□□□ 0.91
SPG7-213ENST00000566221 DCCP43146 1447 aa20.74■□□□□ 0.91
SPG7-213ENST00000566221 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
SPG7-213ENST00000566221 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
SPG7-213ENST00000566221 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
SPG7-213ENST00000566221 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
SPG7-213ENST00000566221 MSH6P52701 1360 aa20.71■□□□□ 0.91
SPG7-213ENST00000566221 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
SPG7-213ENST00000566221 RBM33Q96EV2 1170 aaKnown RBP20.7■□□□□ 0.9
SPG7-213ENST00000566221 EVC2Q86UK5 1308 aa20.7■□□□□ 0.9
SPG7-213ENST00000566221 TOPAZ1Q8N9V7 1692 aa20.7■□□□□ 0.9
SPG7-213ENST00000566221 TMF1P82094 1093 aa20.69■□□□□ 0.9
SPG7-213ENST00000566221 USP32Q8NFA0 1604 aa20.68■□□□□ 0.9
SPG7-213ENST00000566221 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
SPG7-213ENST00000566221 MYOM1P52179 1685 aa20.67■□□□□ 0.9
SPG7-213ENST00000566221 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
SPG7-213ENST00000566221 ANKARQ7Z5J8 1434 aa20.65■□□□□ 0.9
SPG7-213ENST00000566221 CDCA8Q53HL2 280 aa20.65■□□□□ 0.9
SPG7-213ENST00000566221 ATP7BP35670 1465 aa20.64■□□□□ 0.89
SPG7-213ENST00000566221 CDK19Q9BWU1 502 aa20.63■□□□□ 0.89
SPG7-213ENST00000566221 ATAD2Q6PL18 1390 aa20.62■□□□□ 0.89
SPG7-213ENST00000566221 SRPK2P78362 688 aaKnown RBP20.62■□□□□ 0.89
SPG7-213ENST00000566221 PUS7Q96PZ0 661 aaKnown RBP20.62■□□□□ 0.89
SPG7-213ENST00000566221 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
SPG7-213ENST00000566221 ATF3P18847 181 aa20.61■□□□□ 0.89
SPG7-213ENST00000566221 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
SPG7-213ENST00000566221 MST1RQ04912 1400 aa20.61■□□□□ 0.89
SPG7-213ENST00000566221 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
SPG7-213ENST00000566221 CABP2Q9NPB3 220 aa20.59■□□□□ 0.89
SPG7-213ENST00000566221 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
SPG7-213ENST00000566221 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
SPG7-213ENST00000566221 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
SPG7-213ENST00000566221 C11orf95C9JLR9 678 aaPredicted RBP20.57■□□□□ 0.88
SPG7-213ENST00000566221 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
SPG7-213ENST00000566221 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
SPG7-213ENST00000566221 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
SPG7-213ENST00000566221 PRR36Q9H6K5 1346 aa20.55■□□□□ 0.88
SPG7-213ENST00000566221 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
SPG7-213ENST00000566221 PPIP5K1Q6PFW1 1433 aa20.54■□□□□ 0.88
SPG7-213ENST00000566221 MON2Q7Z3U7 1717 aa20.53■□□□□ 0.88
SPG7-213ENST00000566221 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
SPG7-213ENST00000566221 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
SPG7-213ENST00000566221 ROBO1Q9Y6N7 1651 aa20.52■□□□□ 0.88
SPG7-213ENST00000566221 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.88
SPG7-213ENST00000566221 NHSL1Q5SYE7 1610 aa20.5■□□□□ 0.87
SPG7-213ENST00000566221 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SPG7-213ENST00000566221 NRKQ7Z2Y5 1582 aa20.48■□□□□ 0.87
SPG7-213ENST00000566221 ESCO1Q5FWF5 840 aa20.47■□□□□ 0.87
SPG7-213ENST00000566221 TMC1Q8TDI8 760 aa20.47■□□□□ 0.87
SPG7-213ENST00000566221 CD163L1Q9NR16 1453 aa20.47■□□□□ 0.87
SPG7-213ENST00000566221 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
SPG7-213ENST00000566221 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
SPG7-213ENST00000566221 CABP1Q9NZU7 370 aa20.46■□□□□ 0.87
SPG7-213ENST00000566221 RGS17Q9UGC6 210 aaPredicted RBP20.46■□□□□ 0.87
SPG7-213ENST00000566221 PHF8Q9UPP1 1060 aa20.46■□□□□ 0.87
SPG7-213ENST00000566221 ANKRD36BQ8N2N9 1353 aa20.46■□□□□ 0.87
SPG7-213ENST00000566221 CPSF1Q10570 1443 aaKnown RBP20.44■□□□□ 0.86
SPG7-213ENST00000566221 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
SPG7-213ENST00000566221 ORAI2Q96SN7 254 aa20.44■□□□□ 0.86
SPG7-213ENST00000566221 SLC12A5Q9H2X9 1139 aa20.44■□□□□ 0.86
SPG7-213ENST00000566221 A0A1W2PP64 1363 aa20.44■□□□□ 0.86
SPG7-213ENST00000566221 AHDC1Q5TGY3 1603 aaPredicted RBP20.43■□□□□ 0.86
SPG7-213ENST00000566221 BRINP3Q76B58 766 aa20.43■□□□□ 0.86
SPG7-213ENST00000566221 TERF2IPQ9NYB0 399 aa20.43■□□□□ 0.86
SPG7-213ENST00000566221 TRPM3Q9HCF6 1732 aaPredicted RBP20.43■□□□□ 0.86
SPG7-213ENST00000566221 HDGFL2Q7Z4V5 671 aaPredicted RBP20.42■□□□□ 0.86
SPG7-213ENST00000566221 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
SPG7-213ENST00000566221 ACEP12821 1306 aa20.42■□□□□ 0.86
SPG7-213ENST00000566221 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
SPG7-213ENST00000566221 USP6P35125 1406 aa20.41■□□□□ 0.86
SPG7-213ENST00000566221 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
SPG7-213ENST00000566221 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
SPG7-213ENST00000566221 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
SPG7-213ENST00000566221 NPHP3Q7Z494 1330 aa20.39■□□□□ 0.85
SPG7-213ENST00000566221 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
SPG7-213ENST00000566221 PXDNQ92626 1479 aa20.38■□□□□ 0.85
SPG7-213ENST00000566221 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms