RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 C11orf95C9JLR9 678 aaPredicted RBP9.42□□□□□ -0.9
PALB2-204ENST00000566069 WNT7AO00755 349 aa9.42□□□□□ -0.9
PALB2-204ENST00000566069 ZBTB24O43167 697 aaPredicted RBP9.42□□□□□ -0.9
PALB2-204ENST00000566069 TTC24A2A3L6 582 aaPredicted RBP9.41□□□□□ -0.9
PALB2-204ENST00000566069 CD46P15529 392 aa9.41□□□□□ -0.9
PALB2-204ENST00000566069 NFX1Q12986 1120 aaKnown RBP9.41□□□□□ -0.9
PALB2-204ENST00000566069 J3QL48 77 aa9.4□□□□□ -0.9
PALB2-204ENST00000566069 WFS1O76024 890 aa9.4□□□□□ -0.9
PALB2-204ENST00000566069 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
PALB2-204ENST00000566069 TRIM32Q13049 653 aa9.39□□□□□ -0.91
PALB2-204ENST00000566069 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
PALB2-204ENST00000566069 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
PALB2-204ENST00000566069 GPIHBP1Q8IV16 184 aa9.38□□□□□ -0.91
PALB2-204ENST00000566069 HLA-CQ95604 372 aa9.38□□□□□ -0.91
PALB2-204ENST00000566069 MRGPRX2Q96LB1 330 aa9.38□□□□□ -0.91
PALB2-204ENST00000566069 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
PALB2-204ENST00000566069 SNRPBP14678 240 aaKnown RBP9.36□□□□□ -0.91
PALB2-204ENST00000566069 SKOR1P84550 965 aa9.36□□□□□ -0.91
PALB2-204ENST00000566069 Q3C1V9 767 aa9.36□□□□□ -0.91
PALB2-204ENST00000566069 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
PALB2-204ENST00000566069 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
PALB2-204ENST00000566069 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
PALB2-204ENST00000566069 HPS1Q92902 700 aa9.35□□□□□ -0.91
PALB2-204ENST00000566069 KDM4AO75164 1064 aa9.34□□□□□ -0.91
PALB2-204ENST00000566069 WIPF1O43516 503 aa9.33□□□□□ -0.92
PALB2-204ENST00000566069 IRF6O14896 467 aa9.32□□□□□ -0.92
PALB2-204ENST00000566069 MAP2K5Q13163 448 aa9.31□□□□□ -0.92
PALB2-204ENST00000566069 RC3H1Q5TC82 1133 aaKnown RBP9.31□□□□□ -0.92
PALB2-204ENST00000566069 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
PALB2-204ENST00000566069 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
PALB2-204ENST00000566069 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
PALB2-204ENST00000566069 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
PALB2-204ENST00000566069 HOXA2O43364 376 aa9.29□□□□□ -0.92
PALB2-204ENST00000566069 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
PALB2-204ENST00000566069 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
PALB2-204ENST00000566069 TERTO14746 1132 aaKnown RBP9.28□□□□□ -0.92
PALB2-204ENST00000566069 USP46P62068 366 aa9.28□□□□□ -0.92
PALB2-204ENST00000566069 WNT7BP56706 349 aa9.27□□□□□ -0.93
PALB2-204ENST00000566069 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.93
PALB2-204ENST00000566069 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
PALB2-204ENST00000566069 SIAH2O43255 324 aa9.26□□□□□ -0.93
PALB2-204ENST00000566069 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
PALB2-204ENST00000566069 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
PALB2-204ENST00000566069 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
PALB2-204ENST00000566069 JUNDP17535 347 aa9.24□□□□□ -0.93
PALB2-204ENST00000566069 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
PALB2-204ENST00000566069 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
PALB2-204ENST00000566069 ALDH1A1P00352 501 aa9.22□□□□□ -0.93
PALB2-204ENST00000566069 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
PALB2-204ENST00000566069 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
PALB2-204ENST00000566069 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
PALB2-204ENST00000566069 TRIM46Q7Z4K8 759 aa9.2□□□□□ -0.94
PALB2-204ENST00000566069 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
PALB2-204ENST00000566069 NUDT12Q9BQG2 462 aa9.19□□□□□ -0.94
PALB2-204ENST00000566069 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
PALB2-204ENST00000566069 LORP23490 312 aaPredicted RBP9.17□□□□□ -0.94
PALB2-204ENST00000566069 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
PALB2-204ENST00000566069 SH3BP2P78314 561 aa9.17□□□□□ -0.94
PALB2-204ENST00000566069 BMP1P13497 986 aa9.16□□□□□ -0.94
PALB2-204ENST00000566069 CLCN1P35523 988 aa9.16□□□□□ -0.94
PALB2-204ENST00000566069 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
PALB2-204ENST00000566069 FDX1P10109 184 aa9.15□□□□□ -0.94
PALB2-204ENST00000566069 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
PALB2-204ENST00000566069 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
PALB2-204ENST00000566069 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
PALB2-204ENST00000566069 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
PALB2-204ENST00000566069 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
PALB2-204ENST00000566069 CCNYL3P0C7X3 344 aa9.12□□□□□ -0.95
PALB2-204ENST00000566069 MS4A1P11836 297 aa9.12□□□□□ -0.95
PALB2-204ENST00000566069 NDUFV2P19404 249 aa9.12□□□□□ -0.95
PALB2-204ENST00000566069 GMPRP36959 345 aa9.12□□□□□ -0.95
PALB2-204ENST00000566069 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
PALB2-204ENST00000566069 SSTR3P32745 418 aaPredicted RBP9.11□□□□□ -0.95
PALB2-204ENST00000566069 BAP1Q92560 729 aa9.11□□□□□ -0.95
PALB2-204ENST00000566069 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
PALB2-204ENST00000566069 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
PALB2-204ENST00000566069 VEGFBP49765 207 aa9.1□□□□□ -0.95
PALB2-204ENST00000566069 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
PALB2-204ENST00000566069 UNC93B1Q9H1C4 597 aa9.1□□□□□ -0.95
PALB2-204ENST00000566069 PTPRNQ16849 979 aa9.09□□□□□ -0.95
PALB2-204ENST00000566069 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
PALB2-204ENST00000566069 ZFP42Q96MM3 310 aa9.09□□□□□ -0.95
PALB2-204ENST00000566069 NPAS3Q8IXF0 933 aa9.08□□□□□ -0.96
PALB2-204ENST00000566069 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
PALB2-204ENST00000566069 ERBB4Q15303 1308 aa9.07□□□□□ -0.96
PALB2-204ENST00000566069 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
PALB2-204ENST00000566069 KCNH2Q12809 1159 aa9.07□□□□□ -0.96
PALB2-204ENST00000566069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.96
PALB2-204ENST00000566069 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
PALB2-204ENST00000566069 H3BM21 787 aa9.06□□□□□ -0.96
PALB2-204ENST00000566069 MPNDQ8N594 471 aa9.06□□□□□ -0.96
PALB2-204ENST00000566069 KRI1Q8N9T8 703 aaKnown RBP9.06□□□□□ -0.96
PALB2-204ENST00000566069 IRF7Q92985 503 aa9.06□□□□□ -0.96
PALB2-204ENST00000566069 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
PALB2-204ENST00000566069 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
PALB2-204ENST00000566069 VARSP26640 1264 aaKnown RBP9.04□□□□□ -0.96
PALB2-204ENST00000566069 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
PALB2-204ENST00000566069 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
PALB2-204ENST00000566069 NNTQ13423 1086 aa9.03□□□□□ -0.96
PALB2-204ENST00000566069 TIMP2P16035 220 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms