RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ADGRB2O60241 1585 aa30.19■■■□□ 2.42
SHCBP1-205ENST00000566016 PIP4K2BP78356 416 aa30.19■■■□□ 2.42
SHCBP1-205ENST00000566016 NBPF1Q3BBV0 1214 aa30.19■■■□□ 2.42
SHCBP1-205ENST00000566016 SLAIN2Q9P270 581 aa30.19■■■□□ 2.42
SHCBP1-205ENST00000566016 MST1RQ04912 1400 aa30.18■■■□□ 2.42
SHCBP1-205ENST00000566016 TRAK1Q9UPV9 953 aa30.18■■■□□ 2.42
SHCBP1-205ENST00000566016 RALGAPBQ86X10 1494 aa30.17■■■□□ 2.42
SHCBP1-205ENST00000566016 PRAM1Q96QH2 718 aa30.17■■■□□ 2.42
SHCBP1-205ENST00000566016 GPRASP1Q5JY77 1395 aa30.16■■■□□ 2.42
SHCBP1-205ENST00000566016 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
SHCBP1-205ENST00000566016 NBPF8Q3BBV2 869 aa30.16■■■□□ 2.42
SHCBP1-205ENST00000566016 ROCK2O75116 1388 aaKnown RBP30.14■■■□□ 2.42
SHCBP1-205ENST00000566016 FMN2Q9NZ56 1722 aa30.14■■■□□ 2.42
SHCBP1-205ENST00000566016 POGKQ9P215 609 aa30.12■■■□□ 2.41
SHCBP1-205ENST00000566016 C1orf167Q5SNV9 1468 aa30.08■■■□□ 2.41
SHCBP1-205ENST00000566016 QRICH2Q9H0J4 1663 aa30.05■■■□□ 2.4
SHCBP1-205ENST00000566016 AHDC1Q5TGY3 1603 aaPredicted RBP30.05■■■□□ 2.4
SHCBP1-205ENST00000566016 SAFB2Q14151 953 aaKnown RBP eCLIP30.04■■■□□ 2.4
SHCBP1-205ENST00000566016 NHSL1Q5SYE7 1610 aa30.03■■■□□ 2.4
SHCBP1-205ENST00000566016 EIF3AQ14152 1382 aaKnown RBP30.03■■■□□ 2.4
SHCBP1-205ENST00000566016 BRINP3Q76B58 766 aa30.02■■■□□ 2.4
SHCBP1-205ENST00000566016 PHLPP1O60346 1717 aa30.01■■■□□ 2.39
SHCBP1-205ENST00000566016 HSPA1LP34931 641 aa30■■■□□ 2.39
SHCBP1-205ENST00000566016 CENPJQ9HC77 1338 aaPredicted RBP29.99■■■□□ 2.39
SHCBP1-205ENST00000566016 ANKARQ7Z5J8 1434 aa29.99■■■□□ 2.39
SHCBP1-205ENST00000566016 RGPD8O14715 1765 aaPredicted RBP29.98■■■□□ 2.39
SHCBP1-205ENST00000566016 USP32Q8NFA0 1604 aa29.98■■■□□ 2.39
SHCBP1-205ENST00000566016 CARD11Q9BXL7 1154 aa29.98■■■□□ 2.39
SHCBP1-205ENST00000566016 KIF1AQ12756 1690 aa29.97■■■□□ 2.39
SHCBP1-205ENST00000566016 TULP4Q9NRJ4 1543 aa29.97■■■□□ 2.39
SHCBP1-205ENST00000566016 MINK1Q8N4C8 1332 aaPredicted RBP29.97■■■□□ 2.39
SHCBP1-205ENST00000566016 COL16A1Q07092 1604 aaPredicted RBP29.96■■■□□ 2.39
SHCBP1-205ENST00000566016 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
SHCBP1-205ENST00000566016 ITSN1Q15811 1721 aa29.93■■■□□ 2.38
SHCBP1-205ENST00000566016 WASLO00401 505 aaPredicted RBP29.93■■■□□ 2.38
SHCBP1-205ENST00000566016 SBNO2Q9Y2G9 1366 aa29.92■■■□□ 2.38
SHCBP1-205ENST00000566016 ORAI2Q96SN7 254 aa29.9■■■□□ 2.38
SHCBP1-205ENST00000566016 ATP7BP35670 1465 aa29.88■■■□□ 2.37
SHCBP1-205ENST00000566016 ESCO1Q5FWF5 840 aa29.87■■■□□ 2.37
SHCBP1-205ENST00000566016 TOPAZ1Q8N9V7 1692 aa29.87■■■□□ 2.37
SHCBP1-205ENST00000566016 NUTM2FA1L443 756 aa29.87■■■□□ 2.37
SHCBP1-205ENST00000566016 NPHP3Q7Z494 1330 aa29.83■■■□□ 2.37
SHCBP1-205ENST00000566016 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
SHCBP1-205ENST00000566016 SHPRHQ149N8 1683 aa29.83■■■□□ 2.37
SHCBP1-205ENST00000566016 CDK19Q9BWU1 502 aa29.81■■■□□ 2.36
SHCBP1-205ENST00000566016 PXDNQ92626 1479 aa29.81■■■□□ 2.36
SHCBP1-205ENST00000566016 SOS2Q07890 1332 aaPredicted RBP29.8■■■□□ 2.36
SHCBP1-205ENST00000566016 USP47Q96K76 1375 aa29.79■■■□□ 2.36
SHCBP1-205ENST00000566016 PHF8Q9UPP1 1060 aa29.79■■■□□ 2.36
SHCBP1-205ENST00000566016 EVC2Q86UK5 1308 aa29.79■■■□□ 2.36
SHCBP1-205ENST00000566016 JCADQ9P266 1359 aa29.79■■■□□ 2.36
SHCBP1-205ENST00000566016 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
SHCBP1-205ENST00000566016 FOXO3O43524 673 aa29.75■■■□□ 2.35
SHCBP1-205ENST00000566016 DDX17Q92841 729 aaKnown RBP29.75■■■□□ 2.35
SHCBP1-205ENST00000566016 LRRC59Q96AG4 307 aaKnown RBP29.74■■■□□ 2.35
SHCBP1-205ENST00000566016 CCDC61Q9Y6R9 512 aa29.74■■■□□ 2.35
SHCBP1-205ENST00000566016 SLC24A1O60721 1099 aa29.73■■■□□ 2.35
SHCBP1-205ENST00000566016 SRPK2P78362 688 aaKnown RBP29.73■■■□□ 2.35
SHCBP1-205ENST00000566016 ST20-MTHFSA0A0A6YYL1 179 aa29.72■■■□□ 2.35
SHCBP1-205ENST00000566016 TESK2Q96S53 571 aa29.71■■■□□ 2.35
SHCBP1-205ENST00000566016 COL22A1Q8NFW1 1626 aaPredicted RBP29.69■■■□□ 2.34
SHCBP1-205ENST00000566016 MED1Q15648 1581 aaPredicted RBP29.69■■■□□ 2.34
SHCBP1-205ENST00000566016 TRPM3Q9HCF6 1732 aaPredicted RBP29.69■■■□□ 2.34
SHCBP1-205ENST00000566016 CABP2Q9NPB3 220 aa29.68■■■□□ 2.34
SHCBP1-205ENST00000566016 POLR3AO14802 1390 aaPredicted RBP29.68■■■□□ 2.34
SHCBP1-205ENST00000566016 ATAD2Q6PL18 1390 aa29.68■■■□□ 2.34
SHCBP1-205ENST00000566016 PMFBP1Q8TBY8 1022 aa29.68■■■□□ 2.34
SHCBP1-205ENST00000566016 PPIP5K1Q6PFW1 1433 aa29.67■■■□□ 2.34
SHCBP1-205ENST00000566016 PLEKHG3A1L390 1219 aa29.67■■■□□ 2.34
SHCBP1-205ENST00000566016 PNPLA6Q8IY17 1366 aa29.67■■■□□ 2.34
SHCBP1-205ENST00000566016 SPATA31A6Q5VVP1 1343 aa29.66■■■□□ 2.34
SHCBP1-205ENST00000566016 PUS7Q96PZ0 661 aaKnown RBP29.65■■■□□ 2.34
SHCBP1-205ENST00000566016 SBNO1A3KN83 1393 aa29.65■■■□□ 2.34
SHCBP1-205ENST00000566016 PSME1Q06323 249 aa29.63■■■□□ 2.33
SHCBP1-205ENST00000566016 KRT28Q7Z3Y7 464 aa29.63■■■□□ 2.33
SHCBP1-205ENST00000566016 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
SHCBP1-205ENST00000566016 XPCQ01831 940 aaPredicted RBP29.62■■■□□ 2.33
SHCBP1-205ENST00000566016 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
SHCBP1-205ENST00000566016 ALS2Q96Q42 1657 aa29.62■■■□□ 2.33
SHCBP1-205ENST00000566016 SPATA31A3Q5VYP0 1347 aa29.61■■■□□ 2.33
SHCBP1-205ENST00000566016 AKAP12Q02952 1782 aa29.6■■■□□ 2.33
SHCBP1-205ENST00000566016 ACEP12821 1306 aa29.6■■■□□ 2.33
SHCBP1-205ENST00000566016 EIF4G2P78344 907 aaKnown RBP eCLIP29.57■■■□□ 2.32
SHCBP1-205ENST00000566016 LRP6O75581 1613 aa29.56■■■□□ 2.32
SHCBP1-205ENST00000566016 TMF1P82094 1093 aa29.56■■■□□ 2.32
SHCBP1-205ENST00000566016 ARHGEF10O15013 1369 aa29.56■■■□□ 2.32
SHCBP1-205ENST00000566016 BRD4O60885 1362 aaPredicted RBP29.56■■■□□ 2.32
SHCBP1-205ENST00000566016 CABP1Q9NZU7 370 aa29.55■■■□□ 2.32
SHCBP1-205ENST00000566016 DISP3Q9P2K9 1392 aa29.55■■■□□ 2.32
SHCBP1-205ENST00000566016 NINLQ9Y2I6 1382 aa29.54■■■□□ 2.32
SHCBP1-205ENST00000566016 MON2Q7Z3U7 1717 aa29.53■■■□□ 2.32
SHCBP1-205ENST00000566016 ABCA3Q99758 1704 aa29.52■■■□□ 2.32
SHCBP1-205ENST00000566016 USP6P35125 1406 aa29.52■■■□□ 2.32
SHCBP1-205ENST00000566016 CPSF1Q10570 1443 aaKnown RBP29.51■■■□□ 2.32
SHCBP1-205ENST00000566016 CDCA8Q53HL2 280 aa29.5■■■□□ 2.31
SHCBP1-205ENST00000566016 NRKQ7Z2Y5 1582 aa29.5■■■□□ 2.31
SHCBP1-205ENST00000566016 MARF1Q9Y4F3 1742 aaKnown RBP29.5■■■□□ 2.31
SHCBP1-205ENST00000566016 CRYBG1Q9Y4K1 1723 aa29.49■■■□□ 2.31
SHCBP1-205ENST00000566016 HSPA5P11021 654 aaKnown RBP29.48■■■□□ 2.31
SHCBP1-205ENST00000566016 CD163L1Q9NR16 1453 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms