RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 PLCB2Q00722 1185 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 SLC26A8Q96RN1 970 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 IFIT2P09913 472 aaKnown RBP8.04□□□□□ -1.12
LINC01043-201ENST00000565936 CNTLNQ9NXG0 1405 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 TPM4P67936 248 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 CPLX2Q6PUV4 134 aaKnown RBP8.04□□□□□ -1.12
LINC01043-201ENST00000565936 ST18O60284 1047 aa8.04□□□□□ -1.12
LINC01043-201ENST00000565936 SYAP1Q96A49 352 aaPredicted RBP8.04□□□□□ -1.12
LINC01043-201ENST00000565936 CCDC30Q5VVM6 783 aa8.03□□□□□ -1.12
LINC01043-201ENST00000565936 CCDC7Q96M83 1385 aa8.03□□□□□ -1.12
LINC01043-201ENST00000565936 CAMSAP2Q08AD1 1489 aa8.03□□□□□ -1.12
LINC01043-201ENST00000565936 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
LINC01043-201ENST00000565936 RASSF8Q8NHQ8 419 aa8.03□□□□□ -1.12
LINC01043-201ENST00000565936 DNTTIP2Q5QJE6 756 aaKnown RBP8.02□□□□□ -1.12
LINC01043-201ENST00000565936 DIAPH3Q9NSV4 1193 aa8.02□□□□□ -1.12
LINC01043-201ENST00000565936 USP35Q9P2H5 1018 aa8.02□□□□□ -1.12
LINC01043-201ENST00000565936 HMOX1P09601 288 aa8.02□□□□□ -1.13
LINC01043-201ENST00000565936 CABP4P57796 275 aa8.02□□□□□ -1.13
LINC01043-201ENST00000565936 FBXW7Q969H0 707 aa8.02□□□□□ -1.13
LINC01043-201ENST00000565936 MAP3K1Q13233 1512 aa8.02□□□□□ -1.13
LINC01043-201ENST00000565936 CWC22Q9HCG8 908 aaKnown RBP8.02□□□□□ -1.13
LINC01043-201ENST00000565936 RBM42Q9BTD8 480 aaKnown RBP8.02□□□□□ -1.13
LINC01043-201ENST00000565936 ERC2O15083 957 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 VPS53Q5VIR6 699 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 CCDC61Q9Y6R9 512 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 CENPQQ7L2Z9 268 aaPredicted RBP8.01□□□□□ -1.13
LINC01043-201ENST00000565936 CABP1Q9NZU7 370 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 TCEAL9Q9UHQ7 104 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 ZBED9Q6R2W3 1325 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 MTHFSP49914 203 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 TRDNQ13061 729 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
LINC01043-201ENST00000565936 RILPL2Q969X0 211 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 KIF7Q2M1P5 1343 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 ANKRD45Q5TZF3 282 aa8.01□□□□□ -1.13
LINC01043-201ENST00000565936 BRD4O60885 1362 aaPredicted RBP8.01□□□□□ -1.13
LINC01043-201ENST00000565936 PCF11O94913 1555 aaKnown RBP8□□□□□ -1.13
LINC01043-201ENST00000565936 RNF20Q5VTR2 975 aa8□□□□□ -1.13
LINC01043-201ENST00000565936 NOP58Q9Y2X3 529 aaKnown RBP8□□□□□ -1.13
LINC01043-201ENST00000565936 ZKSCAN1P17029 563 aaPredicted RBP8□□□□□ -1.13
LINC01043-201ENST00000565936 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
LINC01043-201ENST00000565936 NECTIN2Q92692 538 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 ERICH2A1L162 156 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 PTPN23Q9H3S7 1636 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 GNAI3P08754 354 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 REC8O95072 547 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 UBTFL1P0CB47 393 aaPredicted RBP7.99□□□□□ -1.13
LINC01043-201ENST00000565936 DRC7Q8IY82 874 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 FAM135AQ9P2D6 1515 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 APPP05067 770 aa7.99□□□□□ -1.13
LINC01043-201ENST00000565936 NUDT16Q96DE0 195 aaKnown RBP7.99□□□□□ -1.13
LINC01043-201ENST00000565936 DHX29Q7Z478 1369 aaKnown RBP7.98□□□□□ -1.13
LINC01043-201ENST00000565936 AIMP1Q12904 312 aaKnown RBP7.98□□□□□ -1.13
LINC01043-201ENST00000565936 ASXL2Q76L83 1435 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 FAM184AQ8NB25 1140 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 GNL3LQ9NVN8 582 aaKnown RBP7.98□□□□□ -1.13
LINC01043-201ENST00000565936 TRIM29Q14134 588 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 ZNF530Q6P9A1 599 aaPredicted RBP7.98□□□□□ -1.13
LINC01043-201ENST00000565936 CADPS2Q86UW7 1296 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 ATP6V1DQ9Y5K8 247 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 TNRQ92752 1358 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 TOM1O60784 492 aa7.98□□□□□ -1.13
LINC01043-201ENST00000565936 DDX54Q8TDD1 881 aaKnown RBP7.98□□□□□ -1.13
LINC01043-201ENST00000565936 THOC2Q8NI27 1593 aaKnown RBP7.97□□□□□ -1.13
LINC01043-201ENST00000565936 SF3A1Q15459 793 aaKnown RBP7.97□□□□□ -1.13
LINC01043-201ENST00000565936 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 H3BQV1 296 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 IFFO2Q5TF58 517 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 RAPGEF6Q8TEU7 1601 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 WDR7Q9Y4E6 1490 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
LINC01043-201ENST00000565936 MSH6P52701 1360 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 PLCH2O75038 1416 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 RRP1P56182 461 aaKnown RBP7.96□□□□□ -1.14
LINC01043-201ENST00000565936 PHF8Q9UPP1 1060 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 RAD21O60216 631 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 SULT6B1Q6IMI4 303 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 SLC12A5Q9H2X9 1139 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 STARD3NLO95772 234 aa7.96□□□□□ -1.14
LINC01043-201ENST00000565936 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
LINC01043-201ENST00000565936 CT47B1P0C2W7 299 aaPredicted RBP7.95□□□□□ -1.14
LINC01043-201ENST00000565936 PPP2R1AP30153 589 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 NBPF1Q3BBV0 1214 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 ITSN2Q9NZM3 1697 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 PHF14O94880 888 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 NINLQ9Y2I6 1382 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 DHX16O60231 1041 aaKnown RBP7.95□□□□□ -1.14
LINC01043-201ENST00000565936 CCDC47Q96A33 483 aaKnown RBP7.95□□□□□ -1.14
LINC01043-201ENST00000565936 NEUROD6Q96NK8 337 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 ABCC5O15440 1437 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 AMOTQ4VCS5 1084 aa7.95□□□□□ -1.14
LINC01043-201ENST00000565936 CPLX1O14810 134 aa7.94□□□□□ -1.14
LINC01043-201ENST00000565936 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
LINC01043-201ENST00000565936 COG6Q9Y2V7 657 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms