RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CCDC91Q7Z6B0 441 aa6.09□□□□□ -1.44
SMG1-211ENST00000565324 CCDC181Q5TID7 509 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 DHX16O60231 1041 aaKnown RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 DACH1Q9UI36 760 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 ZNF330Q9Y3S2 320 aaPredicted RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 CLASRPQ8N2M8 674 aaKnown RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 CCDC192P0DO97 292 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 STIM1Q13586 685 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 C9orf78Q9NZ63 289 aaPredicted RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 NFKBIBQ15653 356 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 DDX58O95786 925 aaKnown RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 GOLGA6L10A0A0M3HER8 536 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 PPM1EQ8WY54 764 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 CCAR1Q8IX12 1150 aaKnown RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 ZNF396Q96N95 335 aaPredicted RBP6.08□□□□□ -1.44
SMG1-211ENST00000565324 FBXO3Q9UK99 471 aa6.08□□□□□ -1.44
SMG1-211ENST00000565324 SHTN1A0MZ66 631 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 POLR3GO15318 223 aaPredicted RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 IFIT2P09913 472 aaKnown RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 MEX3CQ5U5Q3 659 aaKnown RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 KIF3BO15066 747 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 SOX12O15370 315 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 CCDC112Q8NEF3 446 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 TRAK2O60296 914 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 RALYLQ86SE5 291 aaKnown RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 CBFA2T2O43439 604 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 PKD2Q13563 968 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 LUZP1Q86V48 1076 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 CWC22Q9HCG8 908 aaKnown RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 HIP1O00291 1037 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 FOXD4L6Q3SYB3 417 aaPredicted RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 FOXD4L3Q6VB84 417 aaPredicted RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 C22orf23Q9BZE7 217 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 STAMBPO95630 424 aa6.07□□□□□ -1.44
SMG1-211ENST00000565324 RBM33Q96EV2 1170 aaKnown RBP6.07□□□□□ -1.44
SMG1-211ENST00000565324 NUP155O75694 1391 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 NF2P35240 595 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 AMPHP49418 695 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 MICALCLQ6ZW33 695 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 RAB3GAP2Q9H2M9 1393 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 SMC2O95347 1197 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 SART3Q15020 963 aaKnown RBP6.06□□□□□ -1.44
SMG1-211ENST00000565324 NFXL1Q6ZNB6 911 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 VPS37DQ86XT2 251 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 PAK3O75914 559 aaPredicted RBP6.06□□□□□ -1.44
SMG1-211ENST00000565324 CDK5RAP3Q96JB5 506 aa6.06□□□□□ -1.44
SMG1-211ENST00000565324 DZIP1LQ8IYY4 767 aaKnown RBP6.06□□□□□ -1.44
SMG1-211ENST00000565324 API5Q9BZZ5 524 aaKnown RBP6.05□□□□□ -1.44
SMG1-211ENST00000565324 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMG1-211ENST00000565324 DESP17661 470 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 WWC2Q6AWC2 1192 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 ANKRD1Q15327 319 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 CRACR2AQ9BSW2 395 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 UQCRHLA0A096LP55 91 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 UQCRHP07919 91 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 PPFIBP1Q86W92 1011 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 CARMIL2Q6F5E8 1435 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 TTLL5Q6EMB2 1281 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 ANKRD62A6NC57 917 aa6.05□□□□□ -1.44
SMG1-211ENST00000565324 TMCO3Q6UWJ1 677 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 CETN2P41208 172 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 CDC45O75419 566 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 PDCL3Q9H2J4 239 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 C1orf141Q5JVX7 400 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 SAFB2Q14151 953 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMG1-211ENST00000565324 RSPH4AQ5TD94 716 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 CCDC144AA2RUR9 1427 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 CFAP57Q96MR6 1250 aa6.04□□□□□ -1.44
SMG1-211ENST00000565324 G3BP1Q13283 466 aaKnown RBP eCLIP6.03□□□□□ -1.448e-7■□□□□ 8.4
SMG1-211ENST00000565324 CRBNQ96SW2 442 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 AEBP1Q8IUX7 1158 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CCDC148Q8NFR7 591 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CGNQ9P2M7 1197 aaKnown RBP6.03□□□□□ -1.44
SMG1-211ENST00000565324 WASHC2AQ641Q2 1341 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 SERPINC1P01008 464 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CNTROBQ8N137 903 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CCDC102AQ96A19 550 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 SEPT11Q9NVA2 429 aaKnown RBP6.03□□□□□ -1.44
SMG1-211ENST00000565324 ZSCAN12O43309 604 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 SLC3A2P08195 630 aaKnown RBP6.03□□□□□ -1.44
SMG1-211ENST00000565324 TAX1BP1Q86VP1 789 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 TEFQ10587 303 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 NGDNQ8NEJ9 315 aaKnown RBP6.03□□□□□ -1.44
SMG1-211ENST00000565324 ZNF397Q8NF99 534 aaPredicted RBP6.03□□□□□ -1.44
SMG1-211ENST00000565324 STK26Q9P289 416 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 ERCC6Q03468 1493 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 POTEB2H3BUK9 544 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 ZSCAN30Q86W11 494 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 DNAI2Q9GZS0 605 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 CENPHQ9H3R5 247 aa6.03□□□□□ -1.44
SMG1-211ENST00000565324 TRIM21P19474 475 aaKnown RBP6.02□□□□□ -1.44
SMG1-211ENST00000565324 IMMTQ16891 758 aaKnown RBP6.02□□□□□ -1.44
SMG1-211ENST00000565324 MPHOSPH9Q99550 1183 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 TTC5Q8N0Z6 440 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 SLC4A3P48751 1232 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms