RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
CCNDBP1-206ENST00000565296 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
CCNDBP1-206ENST00000565296 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.75
CCNDBP1-206ENST00000565296 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
CCNDBP1-206ENST00000565296 DCCP43146 1447 aa19.68■□□□□ 0.74
CCNDBP1-206ENST00000565296 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
CCNDBP1-206ENST00000565296 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
CCNDBP1-206ENST00000565296 ATF3P18847 181 aa19.67■□□□□ 0.74
CCNDBP1-206ENST00000565296 CADPS2Q86UW7 1296 aa19.67■□□□□ 0.74
CCNDBP1-206ENST00000565296 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
CCNDBP1-206ENST00000565296 TOM1O60784 492 aa19.66■□□□□ 0.74
CCNDBP1-206ENST00000565296 SLAIN2Q9P270 581 aa19.65■□□□□ 0.74
CCNDBP1-206ENST00000565296 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
CCNDBP1-206ENST00000565296 CDC42BPGQ6DT37 1551 aa19.64■□□□□ 0.73
CCNDBP1-206ENST00000565296 MST1RQ04912 1400 aa19.63■□□□□ 0.73
CCNDBP1-206ENST00000565296 USP47Q96K76 1375 aa19.63■□□□□ 0.73
CCNDBP1-206ENST00000565296 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
CCNDBP1-206ENST00000565296 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
CCNDBP1-206ENST00000565296 PIP4K2BP78356 416 aa19.61■□□□□ 0.73
CCNDBP1-206ENST00000565296 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
CCNDBP1-206ENST00000565296 WASLO00401 505 aaPredicted RBP19.6■□□□□ 0.73
CCNDBP1-206ENST00000565296 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
CCNDBP1-206ENST00000565296 C1orf167Q5SNV9 1468 aa19.59■□□□□ 0.73
CCNDBP1-206ENST00000565296 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
CCNDBP1-206ENST00000565296 TESK2Q96S53 571 aa19.59■□□□□ 0.73
CCNDBP1-206ENST00000565296 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.73
CCNDBP1-206ENST00000565296 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
CCNDBP1-206ENST00000565296 CDK19Q9BWU1 502 aa19.57■□□□□ 0.72
CCNDBP1-206ENST00000565296 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
CCNDBP1-206ENST00000565296 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
CCNDBP1-206ENST00000565296 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
CCNDBP1-206ENST00000565296 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
CCNDBP1-206ENST00000565296 BRINP3Q76B58 766 aa19.55■□□□□ 0.72
CCNDBP1-206ENST00000565296 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
CCNDBP1-206ENST00000565296 USP32Q8NFA0 1604 aa19.53■□□□□ 0.72
CCNDBP1-206ENST00000565296 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCNDBP1-206ENST00000565296 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
CCNDBP1-206ENST00000565296 EVC2Q86UK5 1308 aa19.52■□□□□ 0.72
CCNDBP1-206ENST00000565296 ANKARQ7Z5J8 1434 aa19.52■□□□□ 0.72
CCNDBP1-206ENST00000565296 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
CCNDBP1-206ENST00000565296 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.71
CCNDBP1-206ENST00000565296 ESCO1Q5FWF5 840 aa19.51■□□□□ 0.71
CCNDBP1-206ENST00000565296 ATP7BP35670 1465 aa19.51■□□□□ 0.71
CCNDBP1-206ENST00000565296 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-206ENST00000565296 NUDT16Q96DE0 195 aaKnown RBP19.51■□□□□ 0.71
CCNDBP1-206ENST00000565296 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
CCNDBP1-206ENST00000565296 DISP3Q9P2K9 1392 aa19.48■□□□□ 0.71
CCNDBP1-206ENST00000565296 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
CCNDBP1-206ENST00000565296 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
CCNDBP1-206ENST00000565296 HSPA1LP34931 641 aa19.46■□□□□ 0.71
CCNDBP1-206ENST00000565296 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
CCNDBP1-206ENST00000565296 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
CCNDBP1-206ENST00000565296 PMFBP1Q8TBY8 1022 aa19.45■□□□□ 0.7
CCNDBP1-206ENST00000565296 FOXO3O43524 673 aa19.44■□□□□ 0.7
CCNDBP1-206ENST00000565296 SLC24A1O60721 1099 aa19.44■□□□□ 0.7
CCNDBP1-206ENST00000565296 TMF1P82094 1093 aa19.44■□□□□ 0.7
CCNDBP1-206ENST00000565296 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
CCNDBP1-206ENST00000565296 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
CCNDBP1-206ENST00000565296 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
CCNDBP1-206ENST00000565296 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
CCNDBP1-206ENST00000565296 TOPAZ1Q8N9V7 1692 aa19.42■□□□□ 0.7
CCNDBP1-206ENST00000565296 CABP1Q9NZU7 370 aa19.41■□□□□ 0.7
CCNDBP1-206ENST00000565296 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
CCNDBP1-206ENST00000565296 C11orf95C9JLR9 678 aaPredicted RBP19.41■□□□□ 0.7
CCNDBP1-206ENST00000565296 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
CCNDBP1-206ENST00000565296 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
CCNDBP1-206ENST00000565296 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
CCNDBP1-206ENST00000565296 NPHP3Q7Z494 1330 aa19.39■□□□□ 0.7
CCNDBP1-206ENST00000565296 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
CCNDBP1-206ENST00000565296 KIF1AQ12756 1690 aa19.39■□□□□ 0.69
CCNDBP1-206ENST00000565296 PXDNQ92626 1479 aa19.39■□□□□ 0.69
CCNDBP1-206ENST00000565296 ACEP12821 1306 aa19.38■□□□□ 0.69
CCNDBP1-206ENST00000565296 COL16A1Q07092 1604 aaPredicted RBP19.38■□□□□ 0.69
CCNDBP1-206ENST00000565296 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
CCNDBP1-206ENST00000565296 ITSN1Q15811 1721 aa19.37■□□□□ 0.69
CCNDBP1-206ENST00000565296 SLC12A5Q9H2X9 1139 aa19.37■□□□□ 0.69
CCNDBP1-206ENST00000565296 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
CCNDBP1-206ENST00000565296 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
CCNDBP1-206ENST00000565296 PSME1Q06323 249 aa19.35■□□□□ 0.69
CCNDBP1-206ENST00000565296 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
CCNDBP1-206ENST00000565296 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
CCNDBP1-206ENST00000565296 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
CCNDBP1-206ENST00000565296 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.68
CCNDBP1-206ENST00000565296 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
CCNDBP1-206ENST00000565296 KIF7Q2M1P5 1343 aa19.31■□□□□ 0.68
CCNDBP1-206ENST00000565296 SBNO1A3KN83 1393 aa19.31■□□□□ 0.68
CCNDBP1-206ENST00000565296 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
CCNDBP1-206ENST00000565296 SPATA31A3Q5VYP0 1347 aa19.3■□□□□ 0.68
CCNDBP1-206ENST00000565296 USP6P35125 1406 aa19.3■□□□□ 0.68
CCNDBP1-206ENST00000565296 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
CCNDBP1-206ENST00000565296 DIEXFQ68CQ4 756 aaKnown RBP19.3■□□□□ 0.68
CCNDBP1-206ENST00000565296 POLR3GLQ9BT43 218 aa19.29■□□□□ 0.68
CCNDBP1-206ENST00000565296 A0A1W2PP64 1363 aa19.29■□□□□ 0.68
CCNDBP1-206ENST00000565296 WASHC2AQ641Q2 1341 aa19.28■□□□□ 0.68
CCNDBP1-206ENST00000565296 JCADQ9P266 1359 aa19.28■□□□□ 0.68
CCNDBP1-206ENST00000565296 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
CCNDBP1-206ENST00000565296 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
CCNDBP1-206ENST00000565296 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
CCNDBP1-206ENST00000565296 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.68
CCNDBP1-206ENST00000565296 MYOM1P52179 1685 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms