RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
UBR1-205ENST00000564540 DGAT1O75907 488 aa11.44□□□□□ -0.58
UBR1-205ENST00000564540 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
UBR1-205ENST00000564540 MYT1Q01538 1121 aa11.44□□□□□ -0.58
UBR1-205ENST00000564540 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
UBR1-205ENST00000564540 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
UBR1-205ENST00000564540 PRR20EP86478 221 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 PRR20CP86479 221 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 PRR20DP86480 221 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 PRR20BP86481 221 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 PRR20AP86496 221 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 Q3C1V9 767 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 FAM160A2Q8N612 972 aaPredicted RBP11.42□□□□□ -0.58
UBR1-205ENST00000564540 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
UBR1-205ENST00000564540 SLC6A16Q9GZN6 736 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 PCDHGC3Q9UN70 934 aa11.42□□□□□ -0.58
UBR1-205ENST00000564540 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
UBR1-205ENST00000564540 FDX1P10109 184 aa11.41□□□□□ -0.58
UBR1-205ENST00000564540 SLC19A1P41440 591 aa11.41□□□□□ -0.58
UBR1-205ENST00000564540 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
UBR1-205ENST00000564540 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
UBR1-205ENST00000564540 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
UBR1-205ENST00000564540 FAM117AQ9C073 453 aa11.4□□□□□ -0.58
UBR1-205ENST00000564540 POTECB2RU33 542 aa11.38□□□□□ -0.59
UBR1-205ENST00000564540 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
UBR1-205ENST00000564540 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
UBR1-205ENST00000564540 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
UBR1-205ENST00000564540 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
UBR1-205ENST00000564540 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
UBR1-205ENST00000564540 ZNF598Q86UK7 904 aaKnown RBP11.37□□□□□ -0.59
UBR1-205ENST00000564540 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
UBR1-205ENST00000564540 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
UBR1-205ENST00000564540 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
UBR1-205ENST00000564540 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
UBR1-205ENST00000564540 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
UBR1-205ENST00000564540 MSS51Q4VC12 460 aa11.35□□□□□ -0.59
UBR1-205ENST00000564540 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
UBR1-205ENST00000564540 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
UBR1-205ENST00000564540 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
UBR1-205ENST00000564540 LIMD1Q9UGP4 676 aa11.34□□□□□ -0.59
UBR1-205ENST00000564540 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
UBR1-205ENST00000564540 SPTLC1O15269 473 aa11.33□□□□□ -0.6
UBR1-205ENST00000564540 CSPP1Q1MSJ5 1256 aa11.32□□□□□ -0.6
UBR1-205ENST00000564540 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
UBR1-205ENST00000564540 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
UBR1-205ENST00000564540 GJA5P36382 358 aa11.31□□□□□ -0.6
UBR1-205ENST00000564540 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
UBR1-205ENST00000564540 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
UBR1-205ENST00000564540 FCF1Q9Y324 198 aaKnown RBP11.31□□□□□ -0.6
UBR1-205ENST00000564540 MTMR2Q13614 643 aa11.3□□□□□ -0.6
UBR1-205ENST00000564540 GDF9O60383 454 aa11.29□□□□□ -0.6
UBR1-205ENST00000564540 MMP16P51512 607 aa11.29□□□□□ -0.6
UBR1-205ENST00000564540 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
UBR1-205ENST00000564540 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
UBR1-205ENST00000564540 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
UBR1-205ENST00000564540 HRCP23327 699 aa11.28□□□□□ -0.6
UBR1-205ENST00000564540 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
UBR1-205ENST00000564540 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
UBR1-205ENST00000564540 QPCTQ16769 361 aa11.27□□□□□ -0.61
UBR1-205ENST00000564540 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
UBR1-205ENST00000564540 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
UBR1-205ENST00000564540 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
UBR1-205ENST00000564540 JUNDP17535 347 aa11.26□□□□□ -0.61
UBR1-205ENST00000564540 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
UBR1-205ENST00000564540 ZBTB3Q9H5J0 574 aa11.25□□□□□ -0.61
UBR1-205ENST00000564540 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
UBR1-205ENST00000564540 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
UBR1-205ENST00000564540 CFAP99D6REC4 459 aa11.24□□□□□ -0.61
UBR1-205ENST00000564540 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
UBR1-205ENST00000564540 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
UBR1-205ENST00000564540 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
UBR1-205ENST00000564540 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
UBR1-205ENST00000564540 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
UBR1-205ENST00000564540 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
UBR1-205ENST00000564540 LILRB3O75022 631 aa11.22□□□□□ -0.61
UBR1-205ENST00000564540 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
UBR1-205ENST00000564540 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
UBR1-205ENST00000564540 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
UBR1-205ENST00000564540 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
UBR1-205ENST00000564540 TNFRSF10AO00220 468 aa11.21□□□□□ -0.61
UBR1-205ENST00000564540 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
UBR1-205ENST00000564540 CRIPAKQ8N1N5 446 aa11.21□□□□□ -0.61
UBR1-205ENST00000564540 ST8SIA5O15466 376 aa11.2□□□□□ -0.62
UBR1-205ENST00000564540 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
UBR1-205ENST00000564540 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
UBR1-205ENST00000564540 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
UBR1-205ENST00000564540 RPIAP49247 311 aa11.17□□□□□ -0.62
UBR1-205ENST00000564540 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
UBR1-205ENST00000564540 TSC1Q92574 1164 aa11.17□□□□□ -0.62
UBR1-205ENST00000564540 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
UBR1-205ENST00000564540 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
UBR1-205ENST00000564540 PTPRNQ16849 979 aa11.16□□□□□ -0.62
UBR1-205ENST00000564540 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
UBR1-205ENST00000564540 PTCRAQ6ISU1 281 aaPredicted RBP11.15□□□□□ -0.62
UBR1-205ENST00000564540 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
UBR1-205ENST00000564540 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
UBR1-205ENST00000564540 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
UBR1-205ENST00000564540 STK17AQ9UEE5 414 aa11.14□□□□□ -0.63
UBR1-205ENST00000564540 WFS1O76024 890 aa11.13□□□□□ -0.63
UBR1-205ENST00000564540 CD2BP2O95400 341 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms