RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
NSMCE1-207ENST00000564342 LAMC1P11047 1609 aa12.11□□□□□ -0.47
NSMCE1-207ENST00000564342 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
NSMCE1-207ENST00000564342 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
NSMCE1-207ENST00000564342 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
NSMCE1-207ENST00000564342 DCCP43146 1447 aa12.1□□□□□ -0.47
NSMCE1-207ENST00000564342 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
NSMCE1-207ENST00000564342 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
NSMCE1-207ENST00000564342 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
NSMCE1-207ENST00000564342 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
NSMCE1-207ENST00000564342 MED1Q15648 1581 aaPredicted RBP12.08□□□□□ -0.48
NSMCE1-207ENST00000564342 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
NSMCE1-207ENST00000564342 TECPR2O15040 1411 aa12.07□□□□□ -0.48
NSMCE1-207ENST00000564342 MST1RQ04912 1400 aa12.06□□□□□ -0.48
NSMCE1-207ENST00000564342 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
NSMCE1-207ENST00000564342 ATF3P18847 181 aa12.06□□□□□ -0.48
NSMCE1-207ENST00000564342 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
NSMCE1-207ENST00000564342 DISP3Q9P2K9 1392 aa12.05□□□□□ -0.48
NSMCE1-207ENST00000564342 COL16A1Q07092 1604 aaPredicted RBP12.05□□□□□ -0.48
NSMCE1-207ENST00000564342 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
NSMCE1-207ENST00000564342 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 YTHDC2Q9H6S0 1430 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 TMEM132EQ6IEE7 984 aa12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 C14orf93Q9H972 538 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
NSMCE1-207ENST00000564342 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
NSMCE1-207ENST00000564342 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
NSMCE1-207ENST00000564342 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
NSMCE1-207ENST00000564342 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
NSMCE1-207ENST00000564342 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
NSMCE1-207ENST00000564342 STK26Q9P289 416 aa12.01□□□□□ -0.49
NSMCE1-207ENST00000564342 PLEKHH1Q9ULM0 1364 aa12.01□□□□□ -0.49
NSMCE1-207ENST00000564342 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 STAC3Q96MF2 364 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 DLC1Q96QB1 1528 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 SHPRHQ149N8 1683 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
NSMCE1-207ENST00000564342 TRIM26Q12899 539 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-207ENST00000564342 WAPLQ7Z5K2 1190 aa11.99□□□□□ -0.49
NSMCE1-207ENST00000564342 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
NSMCE1-207ENST00000564342 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-207ENST00000564342 ARHGEF28Q8N1W1 1705 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-207ENST00000564342 JCADQ9P266 1359 aa11.97□□□□□ -0.49
NSMCE1-207ENST00000564342 ILDR2Q71H61 639 aa11.96□□□□□ -0.49
NSMCE1-207ENST00000564342 RGPD8O14715 1765 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-207ENST00000564342 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
NSMCE1-207ENST00000564342 ORAI2Q96SN7 254 aa11.95□□□□□ -0.5
NSMCE1-207ENST00000564342 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
NSMCE1-207ENST00000564342 DDX17Q92841 729 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-207ENST00000564342 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
NSMCE1-207ENST00000564342 KIF1AQ12756 1690 aa11.93□□□□□ -0.5
NSMCE1-207ENST00000564342 LRP6O75581 1613 aa11.93□□□□□ -0.5
NSMCE1-207ENST00000564342 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
NSMCE1-207ENST00000564342 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
NSMCE1-207ENST00000564342 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
NSMCE1-207ENST00000564342 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
NSMCE1-207ENST00000564342 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
NSMCE1-207ENST00000564342 SOS2Q07890 1332 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 PXDNQ92626 1479 aa11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 SAFB2Q14151 953 aaKnown RBP eCLIP11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 LRRC59Q96AG4 307 aaKnown RBP11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 POGKQ9P215 609 aa11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
NSMCE1-207ENST00000564342 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-207ENST00000564342 NEUROD1Q13562 356 aa11.89□□□□□ -0.51
NSMCE1-207ENST00000564342 ESCO1Q5FWF5 840 aa11.89□□□□□ -0.51
NSMCE1-207ENST00000564342 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
NSMCE1-207ENST00000564342 NPHP3Q7Z494 1330 aa11.87□□□□□ -0.51
NSMCE1-207ENST00000564342 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
NSMCE1-207ENST00000564342 TULP4Q9NRJ4 1543 aa11.87□□□□□ -0.51
NSMCE1-207ENST00000564342 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
NSMCE1-207ENST00000564342 ITSN1Q15811 1721 aa11.86□□□□□ -0.51
NSMCE1-207ENST00000564342 FOXO3O43524 673 aa11.86□□□□□ -0.51
NSMCE1-207ENST00000564342 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
NSMCE1-207ENST00000564342 QRICH2Q9H0J4 1663 aa11.86□□□□□ -0.51
NSMCE1-207ENST00000564342 GABBR2O75899 941 aa11.85□□□□□ -0.51
NSMCE1-207ENST00000564342 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 MARF1Q9Y4F3 1742 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 WASLO00401 505 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
NSMCE1-207ENST00000564342 ATP7BP35670 1465 aa11.83□□□□□ -0.52
NSMCE1-207ENST00000564342 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-207ENST00000564342 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-207ENST00000564342 POTEAQ6S8J7 498 aa11.83□□□□□ -0.52
NSMCE1-207ENST00000564342 SOCS7O14512 581 aa11.82□□□□□ -0.52
NSMCE1-207ENST00000564342 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
NSMCE1-207ENST00000564342 MEX3CQ5U5Q3 659 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-207ENST00000564342 TONSLQ96HA7 1378 aa11.81□□□□□ -0.52
NSMCE1-207ENST00000564342 ABCA3Q99758 1704 aa11.81□□□□□ -0.52
NSMCE1-207ENST00000564342 SPATA31A3Q5VYP0 1347 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms