RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
CFDP1-203ENST00000564286 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
CFDP1-203ENST00000564286 DDX17Q92841 729 aaKnown RBP16.23■□□□□ 0.19
CFDP1-203ENST00000564286 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
CFDP1-203ENST00000564286 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
CFDP1-203ENST00000564286 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
CFDP1-203ENST00000564286 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
CFDP1-203ENST00000564286 PNPLA6Q8IY17 1366 aa16.21■□□□□ 0.19
CFDP1-203ENST00000564286 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
CFDP1-203ENST00000564286 SPHKAPQ2M3C7 1700 aa16.19■□□□□ 0.18
CFDP1-203ENST00000564286 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
CFDP1-203ENST00000564286 C1orf167Q5SNV9 1468 aa16.17■□□□□ 0.18
CFDP1-203ENST00000564286 USP21Q9UK80 565 aa16.17■□□□□ 0.18
CFDP1-203ENST00000564286 RGS12O14924 1447 aa16.16■□□□□ 0.18
CFDP1-203ENST00000564286 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
CFDP1-203ENST00000564286 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
CFDP1-203ENST00000564286 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-203ENST00000564286 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
CFDP1-203ENST00000564286 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
CFDP1-203ENST00000564286 SOS2Q07890 1332 aaPredicted RBP16.14■□□□□ 0.17
CFDP1-203ENST00000564286 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
CFDP1-203ENST00000564286 CLTCL1P53675 1640 aa16.13■□□□□ 0.17
CFDP1-203ENST00000564286 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
CFDP1-203ENST00000564286 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
CFDP1-203ENST00000564286 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
CFDP1-203ENST00000564286 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
CFDP1-203ENST00000564286 FNBP4Q8N3X1 1017 aaPredicted RBP16.1■□□□□ 0.17
CFDP1-203ENST00000564286 NPHP3Q7Z494 1330 aa16.1■□□□□ 0.17
CFDP1-203ENST00000564286 KIF1BO60333 1816 aa16.08■□□□□ 0.17
CFDP1-203ENST00000564286 NAIPQ13075 1403 aa16.08■□□□□ 0.16
CFDP1-203ENST00000564286 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
CFDP1-203ENST00000564286 LRPPRCP42704 1394 aaKnown RBP16.07■□□□□ 0.16
CFDP1-203ENST00000564286 LAMC1P11047 1609 aa16.05■□□□□ 0.16
CFDP1-203ENST00000564286 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
CFDP1-203ENST00000564286 FOXO3O43524 673 aa16.05■□□□□ 0.16
CFDP1-203ENST00000564286 CCDC125Q86Z20 511 aa16.05■□□□□ 0.16
CFDP1-203ENST00000564286 STK26Q9P289 416 aa16.04■□□□□ 0.16
CFDP1-203ENST00000564286 ATRNO75882 1429 aa16.03■□□□□ 0.16
CFDP1-203ENST00000564286 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
CFDP1-203ENST00000564286 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
CFDP1-203ENST00000564286 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
CFDP1-203ENST00000564286 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
CFDP1-203ENST00000564286 GJD4Q96KN9 370 aaPredicted RBP16.01■□□□□ 0.15
CFDP1-203ENST00000564286 MYOM2P54296 1465 aa16■□□□□ 0.15
CFDP1-203ENST00000564286 WAPLQ7Z5K2 1190 aa16■□□□□ 0.15
CFDP1-203ENST00000564286 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
CFDP1-203ENST00000564286 COL22A1Q8NFW1 1626 aaPredicted RBP15.99■□□□□ 0.15
CFDP1-203ENST00000564286 HAP1P54257 671 aaPredicted RBP15.99■□□□□ 0.15
CFDP1-203ENST00000564286 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
CFDP1-203ENST00000564286 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
CFDP1-203ENST00000564286 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
CFDP1-203ENST00000564286 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
CFDP1-203ENST00000564286 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
CFDP1-203ENST00000564286 PXDNQ92626 1479 aa15.97■□□□□ 0.15
CFDP1-203ENST00000564286 UNC5CLQ8IV45 518 aa15.97■□□□□ 0.15
CFDP1-203ENST00000564286 TMEM132EQ6IEE7 984 aa15.96■□□□□ 0.15
CFDP1-203ENST00000564286 KRT28Q7Z3Y7 464 aa15.96■□□□□ 0.15
CFDP1-203ENST00000564286 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
CFDP1-203ENST00000564286 PSME1Q06323 249 aa15.95■□□□□ 0.14
CFDP1-203ENST00000564286 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
CFDP1-203ENST00000564286 PPLO60437 1756 aa15.95■□□□□ 0.14
CFDP1-203ENST00000564286 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
CFDP1-203ENST00000564286 TECPR2O15040 1411 aa15.94■□□□□ 0.14
CFDP1-203ENST00000564286 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
CFDP1-203ENST00000564286 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
CFDP1-203ENST00000564286 CCDC9Q9Y3X0 531 aaKnown RBP15.92■□□□□ 0.14
CFDP1-203ENST00000564286 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
CFDP1-203ENST00000564286 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
CFDP1-203ENST00000564286 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
CFDP1-203ENST00000564286 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
CFDP1-203ENST00000564286 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
CFDP1-203ENST00000564286 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
CFDP1-203ENST00000564286 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
CFDP1-203ENST00000564286 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
CFDP1-203ENST00000564286 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
CFDP1-203ENST00000564286 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
CFDP1-203ENST00000564286 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
CFDP1-203ENST00000564286 SEPT12Q8IYM1 358 aa15.89■□□□□ 0.13
CFDP1-203ENST00000564286 SLIT2O94813 1529 aa15.89■□□□□ 0.13
CFDP1-203ENST00000564286 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
CFDP1-203ENST00000564286 VPS72Q15906 364 aa15.88■□□□□ 0.13
CFDP1-203ENST00000564286 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
CFDP1-203ENST00000564286 PIK3C2GO75747 1445 aa15.87■□□□□ 0.13
CFDP1-203ENST00000564286 A0A0G2JS52 829 aa15.87■□□□□ 0.13
CFDP1-203ENST00000564286 MYT1Q01538 1121 aa15.87■□□□□ 0.13
CFDP1-203ENST00000564286 CABLES1Q8TDN4 633 aa15.87■□□□□ 0.13
CFDP1-203ENST00000564286 C14orf93Q9H972 538 aaKnown RBP15.87■□□□□ 0.13
CFDP1-203ENST00000564286 MARF1Q9Y4F3 1742 aaKnown RBP15.87■□□□□ 0.13
CFDP1-203ENST00000564286 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
CFDP1-203ENST00000564286 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
CFDP1-203ENST00000564286 POGKQ9P215 609 aa15.86■□□□□ 0.13
CFDP1-203ENST00000564286 ARHGEF10O15013 1369 aa15.86■□□□□ 0.13
CFDP1-203ENST00000564286 EP400Q96L91 3159 aa15.85■□□□□ 0.13
CFDP1-203ENST00000564286 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
CFDP1-203ENST00000564286 KRT27Q7Z3Y8 459 aa15.85■□□□□ 0.13
CFDP1-203ENST00000564286 DEFB132Q7Z7B7 95 aa15.85■□□□□ 0.13
CFDP1-203ENST00000564286 PRAM1Q96QH2 718 aa15.85■□□□□ 0.13
CFDP1-203ENST00000564286 SBNO1A3KN83 1393 aa15.85■□□□□ 0.13
CFDP1-203ENST00000564286 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.85■□□□□ 0.13
CFDP1-203ENST00000564286 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms