RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-210ENST00000564022 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
SCAPER-210ENST00000564022 Q3C1V9 767 aa9.45□□□□□ -0.9
SCAPER-210ENST00000564022 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
SCAPER-210ENST00000564022 NUTM2BA6NNL0 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-210ENST00000564022 NUTM2EB1AL46 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-210ENST00000564022 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
SCAPER-210ENST00000564022 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-210ENST00000564022 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-210ENST00000564022 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
SCAPER-210ENST00000564022 ITGBL1O95965 494 aaPredicted RBP9.43□□□□□ -0.9
SCAPER-210ENST00000564022 GJA5P36382 358 aa9.43□□□□□ -0.9
SCAPER-210ENST00000564022 SPSB2Q99619 263 aa9.43□□□□□ -0.9
SCAPER-210ENST00000564022 QPCTQ16769 361 aa9.42□□□□□ -0.9
SCAPER-210ENST00000564022 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
SCAPER-210ENST00000564022 GOPCQ9HD26 462 aa9.42□□□□□ -0.9
SCAPER-210ENST00000564022 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
SCAPER-210ENST00000564022 HRCP23327 699 aa9.41□□□□□ -0.9
SCAPER-210ENST00000564022 MTMR2Q13614 643 aa9.41□□□□□ -0.9
SCAPER-210ENST00000564022 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
SCAPER-210ENST00000564022 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
SCAPER-210ENST00000564022 ADH1BP00325 375 aa9.4□□□□□ -0.9
SCAPER-210ENST00000564022 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
SCAPER-210ENST00000564022 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.9
SCAPER-210ENST00000564022 TUSC1Q2TAM9 212 aa9.39□□□□□ -0.91
SCAPER-210ENST00000564022 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SCAPER-210ENST00000564022 LILRB3O75022 631 aa9.38□□□□□ -0.91
SCAPER-210ENST00000564022 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
SCAPER-210ENST00000564022 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
SCAPER-210ENST00000564022 RETREG3Q86VR2 466 aa9.38□□□□□ -0.91
SCAPER-210ENST00000564022 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
SCAPER-210ENST00000564022 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
SCAPER-210ENST00000564022 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
SCAPER-210ENST00000564022 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
SCAPER-210ENST00000564022 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
SCAPER-210ENST00000564022 S1PR4O95977 384 aa9.36□□□□□ -0.91
SCAPER-210ENST00000564022 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
SCAPER-210ENST00000564022 PRDM9Q9NQV7 894 aa9.36□□□□□ -0.91
SCAPER-210ENST00000564022 CFAP99D6REC4 459 aa9.34□□□□□ -0.91
SCAPER-210ENST00000564022 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
SCAPER-210ENST00000564022 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
SCAPER-210ENST00000564022 GGCXP38435 758 aa9.32□□□□□ -0.92
SCAPER-210ENST00000564022 RFC5P40937 340 aa9.32□□□□□ -0.92
SCAPER-210ENST00000564022 PPP2R2DQ66LE6 453 aa9.32□□□□□ -0.92
SCAPER-210ENST00000564022 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
SCAPER-210ENST00000564022 AP1G2O75843 785 aa9.31□□□□□ -0.92
SCAPER-210ENST00000564022 JUNDP17535 347 aa9.31□□□□□ -0.92
SCAPER-210ENST00000564022 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SCAPER-210ENST00000564022 HELBQ8NG08 1087 aaPredicted RBP9.31□□□□□ -0.92
SCAPER-210ENST00000564022 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
SCAPER-210ENST00000564022 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
SCAPER-210ENST00000564022 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
SCAPER-210ENST00000564022 DXOO77932 396 aaKnown RBP9.28□□□□□ -0.92
SCAPER-210ENST00000564022 MMP16P51512 607 aa9.28□□□□□ -0.92
SCAPER-210ENST00000564022 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
SCAPER-210ENST00000564022 FCF1Q9Y324 198 aaKnown RBP9.28□□□□□ -0.92
SCAPER-210ENST00000564022 A0A0G2JS52 829 aa9.27□□□□□ -0.93
SCAPER-210ENST00000564022 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
SCAPER-210ENST00000564022 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
SCAPER-210ENST00000564022 DESI1Q6ICB0 168 aa9.26□□□□□ -0.93
SCAPER-210ENST00000564022 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
SCAPER-210ENST00000564022 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 CTHP32929 405 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 PTPRNQ16849 979 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 LYPD8Q6UX82 237 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 ANKLE1Q8NAG6 615 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
SCAPER-210ENST00000564022 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
SCAPER-210ENST00000564022 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
SCAPER-210ENST00000564022 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
SCAPER-210ENST00000564022 SNRKQ9NRH2 765 aa9.2□□□□□ -0.94
SCAPER-210ENST00000564022 EVA1BQ9NVM1 165 aa9.2□□□□□ -0.94
SCAPER-210ENST00000564022 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
SCAPER-210ENST00000564022 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
SCAPER-210ENST00000564022 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
SCAPER-210ENST00000564022 BANK1Q8NDB2 785 aa9.19□□□□□ -0.94
SCAPER-210ENST00000564022 NR6A1Q15406 480 aa9.18□□□□□ -0.94
SCAPER-210ENST00000564022 HMX1Q9NP08 348 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-210ENST00000564022 SLC19A1P41440 591 aa9.17□□□□□ -0.94
SCAPER-210ENST00000564022 PRKD2Q9BZL6 878 aa9.17□□□□□ -0.94
SCAPER-210ENST00000564022 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
SCAPER-210ENST00000564022 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
SCAPER-210ENST00000564022 LIAT1Q6ZQX7 453 aa9.16□□□□□ -0.94
SCAPER-210ENST00000564022 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
SCAPER-210ENST00000564022 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
SCAPER-210ENST00000564022 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
SCAPER-210ENST00000564022 MTMR14Q8NCE2 650 aa9.14□□□□□ -0.95
SCAPER-210ENST00000564022 EMID1Q96A84 441 aaPredicted RBP9.14□□□□□ -0.95
SCAPER-210ENST00000564022 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
SCAPER-210ENST00000564022 RPIAP49247 311 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 FLIIQ13045 1269 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 TRIM32Q13049 653 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 MCM6Q14566 821 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 BAP1Q92560 729 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
SCAPER-210ENST00000564022 GJD4Q96KN9 370 aaPredicted RBP9.11□□□□□ -0.95
SCAPER-210ENST00000564022 APBB1O00213 710 aa9.1□□□□□ -0.95
SCAPER-210ENST00000564022 SPRYD7Q5W111 196 aa9.1□□□□□ -0.95
SCAPER-210ENST00000564022 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
SCAPER-210ENST00000564022 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
SCAPER-210ENST00000564022 PNMA1Q8ND90 353 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms