RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 ADGRB2O60241 1585 aa12.7□□□□□ -0.38
NSMCE1-206ENST00000563900 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
NSMCE1-206ENST00000563900 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
NSMCE1-206ENST00000563900 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
NSMCE1-206ENST00000563900 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
NSMCE1-206ENST00000563900 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
NSMCE1-206ENST00000563900 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
NSMCE1-206ENST00000563900 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
NSMCE1-206ENST00000563900 ATF3P18847 181 aa12.68□□□□□ -0.38
NSMCE1-206ENST00000563900 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
NSMCE1-206ENST00000563900 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
NSMCE1-206ENST00000563900 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
NSMCE1-206ENST00000563900 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
NSMCE1-206ENST00000563900 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-206ENST00000563900 HSPA1LP34931 641 aa12.65□□□□□ -0.38
NSMCE1-206ENST00000563900 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
NSMCE1-206ENST00000563900 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-206ENST00000563900 KCNA4P22459 653 aa12.64□□□□□ -0.39
NSMCE1-206ENST00000563900 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-206ENST00000563900 ROCK2O75116 1388 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-206ENST00000563900 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
NSMCE1-206ENST00000563900 POGKQ9P215 609 aa12.63□□□□□ -0.39
NSMCE1-206ENST00000563900 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
NSMCE1-206ENST00000563900 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
NSMCE1-206ENST00000563900 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
NSMCE1-206ENST00000563900 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
NSMCE1-206ENST00000563900 TULP4Q9NRJ4 1543 aa12.61□□□□□ -0.39
NSMCE1-206ENST00000563900 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
NSMCE1-206ENST00000563900 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-206ENST00000563900 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-206ENST00000563900 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 ORAI2Q96SN7 254 aa12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 ATP7BP35670 1465 aa12.59□□□□□ -0.39
NSMCE1-206ENST00000563900 KIF1AQ12756 1690 aa12.58□□□□□ -0.4
NSMCE1-206ENST00000563900 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-206ENST00000563900 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-206ENST00000563900 RGPD8O14715 1765 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-206ENST00000563900 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
NSMCE1-206ENST00000563900 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-206ENST00000563900 PXDNQ92626 1479 aa12.56□□□□□ -0.4
NSMCE1-206ENST00000563900 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
NSMCE1-206ENST00000563900 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
NSMCE1-206ENST00000563900 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
NSMCE1-206ENST00000563900 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
NSMCE1-206ENST00000563900 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
NSMCE1-206ENST00000563900 JCADQ9P266 1359 aa12.54□□□□□ -0.4
NSMCE1-206ENST00000563900 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
NSMCE1-206ENST00000563900 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
NSMCE1-206ENST00000563900 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
NSMCE1-206ENST00000563900 ITSN1Q15811 1721 aa12.53□□□□□ -0.4
NSMCE1-206ENST00000563900 FOXO3O43524 673 aa12.52□□□□□ -0.41
NSMCE1-206ENST00000563900 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-206ENST00000563900 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-206ENST00000563900 TESK2Q96S53 571 aa12.51□□□□□ -0.41
NSMCE1-206ENST00000563900 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
NSMCE1-206ENST00000563900 USP47Q96K76 1375 aa12.51□□□□□ -0.41
NSMCE1-206ENST00000563900 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-206ENST00000563900 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-206ENST00000563900 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-206ENST00000563900 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-206ENST00000563900 EVC2Q86UK5 1308 aa12.49□□□□□ -0.41
NSMCE1-206ENST00000563900 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
NSMCE1-206ENST00000563900 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
NSMCE1-206ENST00000563900 LRP6O75581 1613 aa12.48□□□□□ -0.41
NSMCE1-206ENST00000563900 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
NSMCE1-206ENST00000563900 SPATA31A6Q5VVP1 1343 aa12.48□□□□□ -0.41
NSMCE1-206ENST00000563900 ST20-MTHFSA0A0A6YYL1 179 aa12.48□□□□□ -0.41
NSMCE1-206ENST00000563900 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
NSMCE1-206ENST00000563900 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
NSMCE1-206ENST00000563900 SRPK2P78362 688 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-206ENST00000563900 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
NSMCE1-206ENST00000563900 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-206ENST00000563900 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
NSMCE1-206ENST00000563900 PPIP5K1Q6PFW1 1433 aa12.46□□□□□ -0.41
NSMCE1-206ENST00000563900 ALS2Q96Q42 1657 aa12.46□□□□□ -0.41
NSMCE1-206ENST00000563900 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-206ENST00000563900 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
NSMCE1-206ENST00000563900 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
NSMCE1-206ENST00000563900 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
NSMCE1-206ENST00000563900 DISP3Q9P2K9 1392 aa12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 ACEP12821 1306 aa12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 PSME1Q06323 249 aa12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-206ENST00000563900 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
NSMCE1-206ENST00000563900 CABP1Q9NZU7 370 aa12.42□□□□□ -0.42
NSMCE1-206ENST00000563900 USP6P35125 1406 aa12.42□□□□□ -0.42
NSMCE1-206ENST00000563900 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
NSMCE1-206ENST00000563900 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
NSMCE1-206ENST00000563900 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
NSMCE1-206ENST00000563900 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
NSMCE1-206ENST00000563900 CRYBG1Q9Y4K1 1723 aa12.41□□□□□ -0.42
NSMCE1-206ENST00000563900 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
NSMCE1-206ENST00000563900 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
NSMCE1-206ENST00000563900 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms