RNA–Protein interactions for RNA: ENST00000563746.5

RPGRIP1L-205, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-205ENST00000563746 U2AF1L5P0DN76 240 aaPredicted RBP8.46□□□□□ -1.06
RPGRIP1L-205ENST00000563746 U2AF1Q01081 240 aaKnown RBP eCLIP8.46□□□□□ -1.06
RPGRIP1L-205ENST00000563746 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CHMP5Q9NZZ3 219 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ATP10BO94823 1461 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ZKSCAN2Q63HK3 967 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 POGKQ9P215 609 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CAPN15O75808 1086 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ITPRIPQ8IWB1 547 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 OSCARQ8IYS5 282 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 KIF3BO15066 747 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 EIF2AK4Q9P2K8 1649 aaKnown RBP8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 IGHDP01880 384 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 GBP4Q96PP9 640 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 A2MP01023 1474 aa8.44□□□□□ -1.06
RPGRIP1L-205ENST00000563746 IPO8O15397 1037 aaKnown RBP8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CHMP4BQ9H444 224 aaKnown RBP8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 WWC1Q8IX03 1113 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 TCP11L2Q8N4U5 519 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ZNF692Q9BU19 519 aaPredicted RBP8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 C22orf23Q9BZE7 217 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CEP170Q5SW79 1584 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 PTMSP20962 102 aa8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
RPGRIP1L-205ENST00000563746 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ASXL1Q8IXJ9 1541 aa8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 SCAF11Q99590 1463 aaKnown RBP8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 TRAK1Q9UPV9 953 aa8.42□□□□□ -1.06
RPGRIP1L-205ENST00000563746 WDR63Q8IWG1 891 aa8.41□□□□□ -1.06
RPGRIP1L-205ENST00000563746 DDX19BQ9UMR2 479 aa8.41□□□□□ -1.06
RPGRIP1L-205ENST00000563746 MCM4P33991 863 aa8.4□□□□□ -1.06
RPGRIP1L-205ENST00000563746 RARSP54136 660 aaKnown RBP8.4□□□□□ -1.06
RPGRIP1L-205ENST00000563746 TRAK2O60296 914 aa8.4□□□□□ -1.06
RPGRIP1L-205ENST00000563746 MRE11P49959 708 aa8.4□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.06
RPGRIP1L-205ENST00000563746 ZNF521Q96K83 1311 aa8.4□□□□□ -1.07
RPGRIP1L-205ENST00000563746 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.07
RPGRIP1L-205ENST00000563746 MTHFSP49914 203 aa8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ARHGEF5Q12774 1597 aa8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 NPC1L1Q9UHC9 1359 aa8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 CROCC2H7BZ55 1655 aa8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 MVPQ14764 893 aaKnown RBP8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
RPGRIP1L-205ENST00000563746 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SYCP2Q9BX26 1530 aa8.38□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SEC24BO95487 1268 aa8.38□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SEMA3EO15041 775 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 TRMT2AQ8IZ69 625 aaKnown RBP8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 PRDM15P57071 1507 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 TRPM1Q7Z4N2 1603 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 DUOX2Q9NRD8 1548 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 CT47B1P0C2W7 299 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 MAGI2Q86UL8 1455 aa8.37□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SLC12A5Q9H2X9 1139 aa8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ISY1Q9ULR0 285 aaKnown RBP8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 SAFB2Q14151 953 aaKnown RBP eCLIP8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
RPGRIP1L-205ENST00000563746 CASC1Q6TDU7 716 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 EXOSC9Q06265 439 aaKnown RBP8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 KIF16BQ96L93 1317 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 CDC42BPAQ5VT25 1732 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 WDR7Q9Y4E6 1490 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 GGT6Q6P531 493 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 LNPKQ9C0E8 428 aa8.35□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ANKRD45Q5TZF3 282 aa8.34□□□□□ -1.07
RPGRIP1L-205ENST00000563746 GRPEL1Q9HAV7 217 aa8.34□□□□□ -1.07
RPGRIP1L-205ENST00000563746 E9PCH4 1651 aa8.34□□□□□ -1.07
RPGRIP1L-205ENST00000563746 CALD1Q05682 793 aaKnown RBP8.34□□□□□ -1.07
RPGRIP1L-205ENST00000563746 TERF2IPQ9NYB0 399 aa8.34□□□□□ -1.07
RPGRIP1L-205ENST00000563746 ATF7IPQ6VMQ6 1270 aa8.33□□□□□ -1.08
RPGRIP1L-205ENST00000563746 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
RPGRIP1L-205ENST00000563746 STAG3Q9UJ98 1225 aa8.33□□□□□ -1.08
RPGRIP1L-205ENST00000563746 ABCA8O94911 1581 aa8.33□□□□□ -1.08
RPGRIP1L-205ENST00000563746 ABCC2Q92887 1545 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms