RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 DIEXFQ68CQ4 756 aaKnown RBP26.99■■□□□ 1.91
SPSB3-204ENST00000563741 ARHGEF28Q8N1W1 1705 aaKnown RBP26.98■■□□□ 1.91
SPSB3-204ENST00000563741 LRPPRCP42704 1394 aaKnown RBP26.96■■□□□ 1.91
SPSB3-204ENST00000563741 CENPJQ9HC77 1338 aaPredicted RBP26.95■■□□□ 1.9
SPSB3-204ENST00000563741 C19orf44Q9H6X5 657 aa26.95■■□□□ 1.9
SPSB3-204ENST00000563741 STK26Q9P289 416 aa26.95■■□□□ 1.9
SPSB3-204ENST00000563741 DISP3Q9P2K9 1392 aa26.94■■□□□ 1.9
SPSB3-204ENST00000563741 SBNO2Q9Y2G9 1366 aa26.94■■□□□ 1.9
SPSB3-204ENST00000563741 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.94■■□□□ 1.9
SPSB3-204ENST00000563741 HSPA1LP34931 641 aa26.92■■□□□ 1.9
SPSB3-204ENST00000563741 DDX10Q13206 875 aaKnown RBP26.92■■□□□ 1.9
SPSB3-204ENST00000563741 DLC1Q96QB1 1528 aa26.92■■□□□ 1.9
SPSB3-204ENST00000563741 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
SPSB3-204ENST00000563741 ABCC11Q96J66 1382 aa26.91■■□□□ 1.9
SPSB3-204ENST00000563741 QRICH2Q9H0J4 1663 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 TECPR2O15040 1411 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 ATF3P18847 181 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 TMF1P82094 1093 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 CADPS2Q86UW7 1296 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 SLAIN2Q9P270 581 aa26.9■■□□□ 1.9
SPSB3-204ENST00000563741 ROBO2Q9HCK4 1378 aa26.88■■□□□ 1.89
SPSB3-204ENST00000563741 KNDC1Q76NI1 1749 aa26.88■■□□□ 1.89
SPSB3-204ENST00000563741 DCCP43146 1447 aa26.86■■□□□ 1.89
SPSB3-204ENST00000563741 ROBO1Q9Y6N7 1651 aa26.85■■□□□ 1.89
SPSB3-204ENST00000563741 PRAM1Q96QH2 718 aa26.85■■□□□ 1.89
SPSB3-204ENST00000563741 ADGRL3Q9HAR2 1447 aa26.85■■□□□ 1.89
SPSB3-204ENST00000563741 NALCNQ8IZF0 1738 aa26.83■■□□□ 1.89
SPSB3-204ENST00000563741 SLC24A1O60721 1099 aa26.83■■□□□ 1.89
SPSB3-204ENST00000563741 POLR3GLQ9BT43 218 aa26.83■■□□□ 1.89
SPSB3-204ENST00000563741 SAFB2Q14151 953 aaKnown RBP eCLIP26.81■■□□□ 1.88
SPSB3-204ENST00000563741 PLEKHH1Q9ULM0 1364 aa26.81■■□□□ 1.88
SPSB3-204ENST00000563741 POGKQ9P215 609 aa26.8■■□□□ 1.88
SPSB3-204ENST00000563741 TULP4Q9NRJ4 1543 aa26.79■■□□□ 1.88
SPSB3-204ENST00000563741 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
SPSB3-204ENST00000563741 CDCA8Q53HL2 280 aa26.78■■□□□ 1.88
SPSB3-204ENST00000563741 WAPLQ7Z5K2 1190 aa26.78■■□□□ 1.88
SPSB3-204ENST00000563741 MST1RQ04912 1400 aa26.74■■□□□ 1.87
SPSB3-204ENST00000563741 MINK1Q8N4C8 1332 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-204ENST00000563741 EVC2Q86UK5 1308 aa26.72■■□□□ 1.87
SPSB3-204ENST00000563741 PHLPP1O60346 1717 aa26.7■■□□□ 1.87
SPSB3-204ENST00000563741 MYOM1P52179 1685 aa26.7■■□□□ 1.86
SPSB3-204ENST00000563741 BRINP3Q76B58 766 aa26.69■■□□□ 1.86
SPSB3-204ENST00000563741 CDC42BPGQ6DT37 1551 aa26.68■■□□□ 1.86
SPSB3-204ENST00000563741 C1orf167Q5SNV9 1468 aa26.66■■□□□ 1.86
SPSB3-204ENST00000563741 PUS7Q96PZ0 661 aaKnown RBP26.66■■□□□ 1.86
SPSB3-204ENST00000563741 AHDC1Q5TGY3 1603 aaPredicted RBP26.65■■□□□ 1.86
SPSB3-204ENST00000563741 ADGRB2O60241 1585 aa26.65■■□□□ 1.86
SPSB3-204ENST00000563741 MIER1Q8N108 512 aa26.64■■□□□ 1.85
SPSB3-204ENST00000563741 CABP2Q9NPB3 220 aa26.63■■□□□ 1.85
SPSB3-204ENST00000563741 COL16A1Q07092 1604 aaPredicted RBP26.62■■□□□ 1.85
SPSB3-204ENST00000563741 SRPK2P78362 688 aaKnown RBP26.61■■□□□ 1.85
SPSB3-204ENST00000563741 CDK19Q9BWU1 502 aa26.61■■□□□ 1.85
SPSB3-204ENST00000563741 ATAD2Q6PL18 1390 aa26.59■■□□□ 1.85
SPSB3-204ENST00000563741 MED1Q15648 1581 aaPredicted RBP26.59■■□□□ 1.85
SPSB3-204ENST00000563741 NHSL1Q5SYE7 1610 aa26.59■■□□□ 1.85
SPSB3-204ENST00000563741 WASLO00401 505 aaPredicted RBP26.59■■□□□ 1.85
SPSB3-204ENST00000563741 PANK3Q9H999 370 aa26.59■■□□□ 1.85
SPSB3-204ENST00000563741 FMN2Q9NZ56 1722 aa26.58■■□□□ 1.85
SPSB3-204ENST00000563741 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
SPSB3-204ENST00000563741 JCADQ9P266 1359 aa26.56■■□□□ 1.84
SPSB3-204ENST00000563741 ANP32CO43423 234 aa26.55■■□□□ 1.84
SPSB3-204ENST00000563741 NINLQ9Y2I6 1382 aa26.54■■□□□ 1.84
SPSB3-204ENST00000563741 PER1O15534 1290 aaPredicted RBP26.54■■□□□ 1.84
SPSB3-204ENST00000563741 ESCO1Q5FWF5 840 aa26.53■■□□□ 1.84
SPSB3-204ENST00000563741 SLC12A5Q9H2X9 1139 aa26.53■■□□□ 1.84
SPSB3-204ENST00000563741 NUTM2FA1L443 756 aa26.53■■□□□ 1.84
SPSB3-204ENST00000563741 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
SPSB3-204ENST00000563741 ATP7BP35670 1465 aa26.51■■□□□ 1.83
SPSB3-204ENST00000563741 DDX17Q92841 729 aaKnown RBP26.51■■□□□ 1.83
SPSB3-204ENST00000563741 SHPRHQ149N8 1683 aa26.49■■□□□ 1.83
SPSB3-204ENST00000563741 ANKRD36BQ8N2N9 1353 aa26.48■■□□□ 1.83
SPSB3-204ENST00000563741 RGPD8O14715 1765 aaPredicted RBP26.48■■□□□ 1.83
SPSB3-204ENST00000563741 LRRC59Q96AG4 307 aaKnown RBP26.48■■□□□ 1.83
SPSB3-204ENST00000563741 PRR36Q9H6K5 1346 aa26.47■■□□□ 1.83
SPSB3-204ENST00000563741 NUDT16Q96DE0 195 aaKnown RBP26.46■■□□□ 1.83
SPSB3-204ENST00000563741 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
SPSB3-204ENST00000563741 CD163L1Q9NR16 1453 aa26.46■■□□□ 1.83
SPSB3-204ENST00000563741 CARD14Q9BXL6 1004 aa26.45■■□□□ 1.83
SPSB3-204ENST00000563741 SOS2Q07890 1332 aaPredicted RBP26.45■■□□□ 1.82
SPSB3-204ENST00000563741 KIF1AQ12756 1690 aa26.45■■□□□ 1.82
SPSB3-204ENST00000563741 SPATA31A6Q5VVP1 1343 aa26.44■■□□□ 1.82
SPSB3-204ENST00000563741 NPHP3Q7Z494 1330 aa26.44■■□□□ 1.82
SPSB3-204ENST00000563741 A0A1W2PP64 1363 aa26.44■■□□□ 1.82
SPSB3-204ENST00000563741 PPIP5K1Q6PFW1 1433 aa26.44■■□□□ 1.82
SPSB3-204ENST00000563741 CABP1Q9NZU7 370 aa26.44■■□□□ 1.82
SPSB3-204ENST00000563741 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
SPSB3-204ENST00000563741 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
SPSB3-204ENST00000563741 KNSTRNQ9Y448 316 aa26.43■■□□□ 1.82
SPSB3-204ENST00000563741 USP32Q8NFA0 1604 aa26.43■■□□□ 1.82
SPSB3-204ENST00000563741 TOPAZ1Q8N9V7 1692 aa26.43■■□□□ 1.82
SPSB3-204ENST00000563741 CCDC61Q9Y6R9 512 aa26.42■■□□□ 1.82
SPSB3-204ENST00000563741 NSD3Q9BZ95 1437 aa26.42■■□□□ 1.82
SPSB3-204ENST00000563741 FOXO3O43524 673 aa26.42■■□□□ 1.82
SPSB3-204ENST00000563741 AMER1Q5JTC6 1135 aaPredicted RBP26.41■■□□□ 1.82
SPSB3-204ENST00000563741 PHF8Q9UPP1 1060 aa26.4■■□□□ 1.82
SPSB3-204ENST00000563741 KTN1Q86UP2 1357 aaKnown RBP26.39■■□□□ 1.82
SPSB3-204ENST00000563741 CNGB1Q14028 1251 aaPredicted RBP26.39■■□□□ 1.81
SPSB3-204ENST00000563741 TERF2IPQ9NYB0 399 aa26.39■■□□□ 1.81
SPSB3-204ENST00000563741 PXDNQ92626 1479 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms