RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ZBTB24O43167 697 aaPredicted RBP8.44□□□□□ -1.06
CDR2-203ENST00000563573 ZMYND10O75800 440 aa8.44□□□□□ -1.06
CDR2-203ENST00000563573 DGAT1O75907 488 aa8.44□□□□□ -1.06
CDR2-203ENST00000563573 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
CDR2-203ENST00000563573 FCF1Q9Y324 198 aaKnown RBP8.44□□□□□ -1.06
CDR2-203ENST00000563573 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
CDR2-203ENST00000563573 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
CDR2-203ENST00000563573 HOXA2O43364 376 aa8.42□□□□□ -1.06
CDR2-203ENST00000563573 PKDCCQ504Y2 493 aa8.42□□□□□ -1.06
CDR2-203ENST00000563573 RNF19BQ6ZMZ0 732 aa8.42□□□□□ -1.06
CDR2-203ENST00000563573 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
CDR2-203ENST00000563573 SHROOM4Q9ULL8 1493 aa8.42□□□□□ -1.06
CDR2-203ENST00000563573 GDF9O60383 454 aa8.41□□□□□ -1.06
CDR2-203ENST00000563573 MMP16P51512 607 aa8.41□□□□□ -1.06
CDR2-203ENST00000563573 SCRIBQ14160 1630 aa8.4□□□□□ -1.06
CDR2-203ENST00000563573 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.06
CDR2-203ENST00000563573 AMHR2Q16671 573 aa8.4□□□□□ -1.06
CDR2-203ENST00000563573 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
CDR2-203ENST00000563573 PRDM9Q9NQV7 894 aa8.39□□□□□ -1.07
CDR2-203ENST00000563573 LCE2BO14633 110 aa8.38□□□□□ -1.07
CDR2-203ENST00000563573 DXOO77932 396 aaKnown RBP8.38□□□□□ -1.07
CDR2-203ENST00000563573 UNC13AQ9UPW8 1703 aa8.37□□□□□ -1.07
CDR2-203ENST00000563573 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
CDR2-203ENST00000563573 FOXC1Q12948 553 aa8.37□□□□□ -1.07
CDR2-203ENST00000563573 DIXDC1Q155Q3 683 aa8.37□□□□□ -1.07
CDR2-203ENST00000563573 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
CDR2-203ENST00000563573 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
CDR2-203ENST00000563573 FDX1P10109 184 aa8.35□□□□□ -1.07
CDR2-203ENST00000563573 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
CDR2-203ENST00000563573 AK7Q96M32 723 aa8.35□□□□□ -1.07
CDR2-203ENST00000563573 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
CDR2-203ENST00000563573 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
CDR2-203ENST00000563573 HLA-CQ95604 372 aa8.34□□□□□ -1.07
CDR2-203ENST00000563573 REPIN1Q9BWE0 567 aaKnown RBP8.34□□□□□ -1.07
CDR2-203ENST00000563573 JUNDP17535 347 aa8.33□□□□□ -1.08
CDR2-203ENST00000563573 MYT1Q01538 1121 aa8.33□□□□□ -1.08
CDR2-203ENST00000563573 TRIM32Q13049 653 aa8.33□□□□□ -1.08
CDR2-203ENST00000563573 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
CDR2-203ENST00000563573 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
CDR2-203ENST00000563573 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
CDR2-203ENST00000563573 WNT7AO00755 349 aa8.32□□□□□ -1.08
CDR2-203ENST00000563573 GJA5P36382 358 aa8.32□□□□□ -1.08
CDR2-203ENST00000563573 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
CDR2-203ENST00000563573 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
CDR2-203ENST00000563573 TRIM66O15016 1216 aa8.31□□□□□ -1.08
CDR2-203ENST00000563573 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
CDR2-203ENST00000563573 GUCA2AQ02747 115 aa8.3□□□□□ -1.08
CDR2-203ENST00000563573 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
CDR2-203ENST00000563573 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
CDR2-203ENST00000563573 WNT7BP56706 349 aa8.29□□□□□ -1.08
CDR2-203ENST00000563573 AVPP01185 164 aa8.28□□□□□ -1.08
CDR2-203ENST00000563573 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
CDR2-203ENST00000563573 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
CDR2-203ENST00000563573 SNIP1Q8TAD8 396 aaKnown RBP8.28□□□□□ -1.08
CDR2-203ENST00000563573 SYMPKQ92797 1274 aaKnown RBP8.28□□□□□ -1.08
CDR2-203ENST00000563573 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
CDR2-203ENST00000563573 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
CDR2-203ENST00000563573 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
CDR2-203ENST00000563573 MS4A1P11836 297 aa8.27□□□□□ -1.09
CDR2-203ENST00000563573 MTMR2Q13614 643 aa8.27□□□□□ -1.09
CDR2-203ENST00000563573 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
CDR2-203ENST00000563573 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
CDR2-203ENST00000563573 NDUFV2P19404 249 aa8.26□□□□□ -1.09
CDR2-203ENST00000563573 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
CDR2-203ENST00000563573 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
CDR2-203ENST00000563573 PTPRNQ16849 979 aa8.25□□□□□ -1.09
CDR2-203ENST00000563573 MRGPRX2Q96LB1 330 aa8.25□□□□□ -1.09
CDR2-203ENST00000563573 AAASQ9NRG9 546 aa8.25□□□□□ -1.09
CDR2-203ENST00000563573 AXIN1O15169 862 aa8.24□□□□□ -1.09
CDR2-203ENST00000563573 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
CDR2-203ENST00000563573 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
CDR2-203ENST00000563573 RSBN1LQ6PCB5 846 aaPredicted RBP8.24□□□□□ -1.09
CDR2-203ENST00000563573 BICRAQ9NZM4 1560 aa8.23□□□□□ -1.09
CDR2-203ENST00000563573 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
CDR2-203ENST00000563573 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
CDR2-203ENST00000563573 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
CDR2-203ENST00000563573 SPTLC1O15269 473 aa8.22□□□□□ -1.09
CDR2-203ENST00000563573 PDE4DQ08499 809 aa8.22□□□□□ -1.09
CDR2-203ENST00000563573 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
CDR2-203ENST00000563573 ZBTB3Q9H5J0 574 aa8.21□□□□□ -1.1
CDR2-203ENST00000563573 SMPD1P17405 629 aa8.2□□□□□ -1.1
CDR2-203ENST00000563573 SKOR1P84550 965 aa8.2□□□□□ -1.1
CDR2-203ENST00000563573 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
CDR2-203ENST00000563573 RIC3Q7Z5B4 369 aa8.2□□□□□ -1.1
CDR2-203ENST00000563573 TUSC1Q2TAM9 212 aa8.19□□□□□ -1.1
CDR2-203ENST00000563573 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
CDR2-203ENST00000563573 EHBP1Q8NDI1 1231 aa8.19□□□□□ -1.1
CDR2-203ENST00000563573 SLC24A3Q9HC58 644 aa8.19□□□□□ -1.1
CDR2-203ENST00000563573 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
CDR2-203ENST00000563573 BCANQ96GW7 911 aa8.18□□□□□ -1.1
CDR2-203ENST00000563573 RSPH6AQ9H0K4 717 aa8.18□□□□□ -1.1
CDR2-203ENST00000563573 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
CDR2-203ENST00000563573 HRCP23327 699 aa8.17□□□□□ -1.1
CDR2-203ENST00000563573 ZNF775Q96BV0 537 aaPredicted RBP8.17□□□□□ -1.1
CDR2-203ENST00000563573 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
CDR2-203ENST00000563573 J3QL48 77 aa8.16□□□□□ -1.1
CDR2-203ENST00000563573 POTECB2RU33 542 aa8.15□□□□□ -1.1
CDR2-203ENST00000563573 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
CDR2-203ENST00000563573 CTHP32929 405 aa8.15□□□□□ -1.1
CDR2-203ENST00000563573 SH3BP2P78314 561 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms