RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
USB1-207ENST00000563149 BCAR3O75815 825 aa16.94■□□□□ 0.3
USB1-207ENST00000563149 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
USB1-207ENST00000563149 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
USB1-207ENST00000563149 NSD2O96028 1365 aa16.92■□□□□ 0.3
USB1-207ENST00000563149 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
USB1-207ENST00000563149 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
USB1-207ENST00000563149 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
USB1-207ENST00000563149 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
USB1-207ENST00000563149 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
USB1-207ENST00000563149 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
USB1-207ENST00000563149 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
USB1-207ENST00000563149 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
USB1-207ENST00000563149 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
USB1-207ENST00000563149 CFAP53Q96M91 514 aa16.9■□□□□ 0.3
USB1-207ENST00000563149 ABCC3O15438 1527 aa16.9■□□□□ 0.3
USB1-207ENST00000563149 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
USB1-207ENST00000563149 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.3
USB1-207ENST00000563149 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
USB1-207ENST00000563149 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
USB1-207ENST00000563149 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
USB1-207ENST00000563149 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
USB1-207ENST00000563149 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
USB1-207ENST00000563149 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
USB1-207ENST00000563149 GLI2P10070 1586 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 EVC2Q86UK5 1308 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
USB1-207ENST00000563149 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
USB1-207ENST00000563149 RGS3P49796 1198 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 PMFBP1Q8TBY8 1022 aa16.87■□□□□ 0.29
USB1-207ENST00000563149 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
USB1-207ENST00000563149 IGHDP01880 384 aa16.85■□□□□ 0.29
USB1-207ENST00000563149 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
USB1-207ENST00000563149 GGT6Q6P531 493 aa16.85■□□□□ 0.29
USB1-207ENST00000563149 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
USB1-207ENST00000563149 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
USB1-207ENST00000563149 NEO1Q92859 1461 aa16.84■□□□□ 0.29
USB1-207ENST00000563149 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
USB1-207ENST00000563149 MTHFSP49914 203 aa16.84■□□□□ 0.29
USB1-207ENST00000563149 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
USB1-207ENST00000563149 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
USB1-207ENST00000563149 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
USB1-207ENST00000563149 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
USB1-207ENST00000563149 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
USB1-207ENST00000563149 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
USB1-207ENST00000563149 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
USB1-207ENST00000563149 SIGLEC1Q9BZZ2 1709 aa16.81■□□□□ 0.28
USB1-207ENST00000563149 CFAP65Q6ZU64 1925 aaKnown RBP16.81■□□□□ 0.28
USB1-207ENST00000563149 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
USB1-207ENST00000563149 TNNT2P45379 298 aaPredicted RBP16.79■□□□□ 0.28
USB1-207ENST00000563149 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
USB1-207ENST00000563149 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
USB1-207ENST00000563149 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
USB1-207ENST00000563149 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
USB1-207ENST00000563149 ABCC11Q96J66 1382 aa16.77■□□□□ 0.28
USB1-207ENST00000563149 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
USB1-207ENST00000563149 SLC4A3P48751 1232 aa16.77■□□□□ 0.27
USB1-207ENST00000563149 GSE1Q14687 1217 aa16.77■□□□□ 0.27
USB1-207ENST00000563149 MED14O60244 1454 aa16.76■□□□□ 0.27
USB1-207ENST00000563149 USP19O94966 1318 aa16.76■□□□□ 0.27
USB1-207ENST00000563149 RWDD1Q9H446 243 aaPredicted RBP16.76■□□□□ 0.27
USB1-207ENST00000563149 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
USB1-207ENST00000563149 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
USB1-207ENST00000563149 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
USB1-207ENST00000563149 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
USB1-207ENST00000563149 BECN1Q14457 450 aa16.74■□□□□ 0.27
USB1-207ENST00000563149 IL16Q14005 1332 aa16.73■□□□□ 0.27
USB1-207ENST00000563149 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
USB1-207ENST00000563149 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
USB1-207ENST00000563149 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
USB1-207ENST00000563149 PCDHB15Q9Y5E8 787 aa16.72■□□□□ 0.27
USB1-207ENST00000563149 RLBP1P12271 317 aa16.72■□□□□ 0.27
USB1-207ENST00000563149 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
USB1-207ENST00000563149 PNNQ9H307 717 aaKnown RBP16.72■□□□□ 0.27
USB1-207ENST00000563149 CABP2Q9NPB3 220 aa16.72■□□□□ 0.27
USB1-207ENST00000563149 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
USB1-207ENST00000563149 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
USB1-207ENST00000563149 IDI1Q13907 227 aa16.71■□□□□ 0.27
USB1-207ENST00000563149 PLEKHF1Q96S99 279 aa16.71■□□□□ 0.27
USB1-207ENST00000563149 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
USB1-207ENST00000563149 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
USB1-207ENST00000563149 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
USB1-207ENST00000563149 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
USB1-207ENST00000563149 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
USB1-207ENST00000563149 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
USB1-207ENST00000563149 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
USB1-207ENST00000563149 PTPRMP28827 1452 aa16.69■□□□□ 0.26
USB1-207ENST00000563149 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
USB1-207ENST00000563149 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
USB1-207ENST00000563149 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
USB1-207ENST00000563149 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
USB1-207ENST00000563149 SEC24BO95487 1268 aa16.66■□□□□ 0.26
USB1-207ENST00000563149 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
USB1-207ENST00000563149 TNNQ9UQP3 1299 aa16.66■□□□□ 0.26
USB1-207ENST00000563149 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
USB1-207ENST00000563149 BCL2L13Q9BXK5 485 aa16.66■□□□□ 0.26
USB1-207ENST00000563149 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms